RNA–Protein interactions for RNA: ENST00000561055.1

RABGGTA-221, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-221ENST00000561055 SLC35A1P78382 337 aa8.61□□□□□ -1.03
RABGGTA-221ENST00000561055 TRAP1Q12931 704 aaKnown RBP8.61□□□□□ -1.03
RABGGTA-221ENST00000561055 PDK3Q15120 406 aa8.61□□□□□ -1.03
RABGGTA-221ENST00000561055 RNPS1Q15287 305 aaKnown RBP8.61□□□□□ -1.03
RABGGTA-221ENST00000561055 ELOA3BQ3SY89 546 aa8.61□□□□□ -1.03
RABGGTA-221ENST00000561055 IQCCQ4KMZ1 466 aa8.61□□□□□ -1.03
RABGGTA-221ENST00000561055 MTX3Q5HYI7 312 aa8.61□□□□□ -1.03
RABGGTA-221ENST00000561055 LCN8Q6JVE9 175 aa8.61□□□□□ -1.03
RABGGTA-221ENST00000561055 TSEN54Q7Z6J9 526 aaKnown RBP8.61□□□□□ -1.03
RABGGTA-221ENST00000561055 VTCN1Q7Z7D3 282 aa8.61□□□□□ -1.03
RABGGTA-221ENST00000561055 ATP6V1C2Q8NEY4 427 aa8.61□□□□□ -1.03
RABGGTA-221ENST00000561055 ELOA3Q8NG57 546 aa8.61□□□□□ -1.03
RABGGTA-221ENST00000561055 OR10Q1Q8NGQ4 319 aa8.61□□□□□ -1.03
RABGGTA-221ENST00000561055 MFSD8Q8NHS3 518 aa8.61□□□□□ -1.03
RABGGTA-221ENST00000561055 VANGL1Q8TAA9 524 aaPredicted RBP8.61□□□□□ -1.03
RABGGTA-221ENST00000561055 RNF128Q8TEB7 428 aa8.61□□□□□ -1.03
RABGGTA-221ENST00000561055 SDCCAG3Q96C92 435 aa8.61□□□□□ -1.03
RABGGTA-221ENST00000561055 ASB9Q96DX5 294 aa8.61□□□□□ -1.03
RABGGTA-221ENST00000561055 PYURFQ96I23 114 aa8.61□□□□□ -1.03
RABGGTA-221ENST00000561055 C7orf34Q96L11 122 aa8.61□□□□□ -1.03
RABGGTA-221ENST00000561055 NSMCE2Q96MF7 247 aa8.61□□□□□ -1.03
RABGGTA-221ENST00000561055 PSMG3-AS1Q96PY0 264 aa8.61□□□□□ -1.03
RABGGTA-221ENST00000561055 OR5B2Q96R09 309 aa8.61□□□□□ -1.03
RABGGTA-221ENST00000561055 TACO1Q9BSH4 297 aaKnown RBP8.61□□□□□ -1.03
RABGGTA-221ENST00000561055 SFXN3Q9BWM7 321 aa8.61□□□□□ -1.03
RABGGTA-221ENST00000561055 AMBRA1Q9C0C7 1298 aa8.61□□□□□ -1.03
RABGGTA-221ENST00000561055 OR11A1Q9GZK7 315 aa8.61□□□□□ -1.03
RABGGTA-221ENST00000561055 MMADHCQ9H3L0 296 aaPredicted RBP8.61□□□□□ -1.03
RABGGTA-221ENST00000561055 JKAMPQ9P055 326 aa8.61□□□□□ -1.03
RABGGTA-221ENST00000561055 KLF2Q9Y5W3 355 aaPredicted RBP8.61□□□□□ -1.03
RABGGTA-221ENST00000561055 IGKV1D-42A0A075B6H8 117 aa8.6□□□□□ -1.03
RABGGTA-221ENST00000561055 IGKV3D-15A0A087WSY6 115 aa8.6□□□□□ -1.03
RABGGTA-221ENST00000561055 HTR3EA5X5Y0 456 aa8.6□□□□□ -1.03
RABGGTA-221ENST00000561055 LIPT2A6NK58 231 aa8.6□□□□□ -1.03
RABGGTA-221ENST00000561055 CPSF4LA6NMK7 179 aaKnown RBP8.6□□□□□ -1.03
RABGGTA-221ENST00000561055 ACOT8O14734 319 aa8.6□□□□□ -1.03
RABGGTA-221ENST00000561055 SMAD9O15198 467 aaKnown RBP8.6□□□□□ -1.03
RABGGTA-221ENST00000561055 GSC2O15499 205 aa8.6□□□□□ -1.03
RABGGTA-221ENST00000561055 CYTIPO60759 359 aa8.6□□□□□ -1.03
RABGGTA-221ENST00000561055 SS18L1O75177 396 aaPredicted RBP8.6□□□□□ -1.03
RABGGTA-221ENST00000561055 TNFSF13O75888 250 aa8.6□□□□□ -1.03
RABGGTA-221ENST00000561055 DNAJC8O75937 253 aaPredicted RBP8.6□□□□□ -1.03
RABGGTA-221ENST00000561055 PRKD3O94806 890 aa8.6□□□□□ -1.03
RABGGTA-221ENST00000561055 PRSS23O95084 383 aa8.6□□□□□ -1.03
RABGGTA-221ENST00000561055 CLDN14O95500 239 aa8.6□□□□□ -1.03
RABGGTA-221ENST00000561055 ZNF682O95780 498 aa8.6□□□□□ -1.03
RABGGTA-221ENST00000561055 IFNW1P05000 195 aa8.6□□□□□ -1.03
RABGGTA-221ENST00000561055 GPIP06744 558 aa8.6□□□□□ -1.03
RABGGTA-221ENST00000561055 CCNA2P20248 432 aa8.6□□□□□ -1.03
RABGGTA-221ENST00000561055 TNFRSF1BP20333 461 aa8.6□□□□□ -1.03
RABGGTA-221ENST00000561055 ENPP1P22413 925 aa8.6□□□□□ -1.03
RABGGTA-221ENST00000561055 IDUAP35475 653 aa8.6□□□□□ -1.03
RABGGTA-221ENST00000561055 RBM34P42696 430 aaKnown RBP8.6□□□□□ -1.03
RABGGTA-221ENST00000561055 KIR2DL2P43627 348 aaPredicted RBP8.6□□□□□ -1.03
RABGGTA-221ENST00000561055 SLC16A1P53985 500 aa8.6□□□□□ -1.03
RABGGTA-221ENST00000561055 MS4A2Q01362 244 aa8.6□□□□□ -1.03
RABGGTA-221ENST00000561055 SLC25A35Q3KQZ1 300 aa8.6□□□□□ -1.03
RABGGTA-221ENST00000561055 FBXL19-AS1Q494R0 122 aa8.6□□□□□ -1.03
RABGGTA-221ENST00000561055 FAM69AQ5T7M9 428 aa8.6□□□□□ -1.03
RABGGTA-221ENST00000561055 C1orf140Q5VVS0 124 aa8.6□□□□□ -1.03
RABGGTA-221ENST00000561055 ABLIM2Q6H8Q1 611 aa8.6□□□□□ -1.03
RABGGTA-221ENST00000561055 PAQR6Q6TCH4 344 aa8.6□□□□□ -1.03
RABGGTA-221ENST00000561055 PLXDC2Q6UX71 529 aa8.6□□□□□ -1.03
RABGGTA-221ENST00000561055 FKBP9P1Q75LS8 142 aa8.6□□□□□ -1.03
RABGGTA-221ENST00000561055 FCRLAQ7L513 359 aa8.6□□□□□ -1.03
RABGGTA-221ENST00000561055 FAM214BQ7L5A3 538 aa8.6□□□□□ -1.03
RABGGTA-221ENST00000561055 P4HA3Q7Z4N8 544 aa8.6□□□□□ -1.03
RABGGTA-221ENST00000561055 GDF7Q7Z4P5 450 aa8.6□□□□□ -1.03
RABGGTA-221ENST00000561055 CCDC71Q8IV32 467 aaPredicted RBP8.6□□□□□ -1.03
RABGGTA-221ENST00000561055 LIX1LQ8IVB5 337 aa8.6□□□□□ -1.03
RABGGTA-221ENST00000561055 CA5BP1Q8WTZ4 195 aa8.6□□□□□ -1.03
RABGGTA-221ENST00000561055 INTS12Q96CB8 462 aaKnown RBP8.6□□□□□ -1.03
RABGGTA-221ENST00000561055 GMPPAQ96IJ6 420 aaPredicted RBP8.6□□□□□ -1.03
RABGGTA-221ENST00000561055 HSH2DQ96JZ2 352 aa8.6□□□□□ -1.03
RABGGTA-221ENST00000561055 PRRC1Q96M27 445 aa8.6□□□□□ -1.03
RABGGTA-221ENST00000561055 PRSS27Q9BQR3 290 aa8.6□□□□□ -1.03
RABGGTA-221ENST00000561055 THTPAQ9BU02 230 aa8.6□□□□□ -1.03
RABGGTA-221ENST00000561055 PTDSS2Q9BVG9 487 aa8.6□□□□□ -1.03
RABGGTA-221ENST00000561055 SLC19A3Q9BZV2 496 aa8.6□□□□□ -1.03
RABGGTA-221ENST00000561055 BCO1Q9HAY6 547 aa8.6□□□□□ -1.03
RABGGTA-221ENST00000561055 SELENONQ9NZV5 590 aa8.6□□□□□ -1.03
RABGGTA-221ENST00000561055 RIMS3Q9UJD0 308 aa8.6□□□□□ -1.03
RABGGTA-221ENST00000561055 A4GNTQ9UNA3 340 aa8.6□□□□□ -1.03
RABGGTA-221ENST00000561055 TRAV36DV7A0A075B6V5 113 aa8.59□□□□□ -1.03
RABGGTA-221ENST00000561055 LOC102725191A0A1B0GVB3 256 aa8.59□□□□□ -1.03
RABGGTA-221ENST00000561055 A0A1W2PNV4 684 aa8.59□□□□□ -1.03
RABGGTA-221ENST00000561055 TCRBV5S2A0A599 114 aa8.59□□□□□ -1.03
RABGGTA-221ENST00000561055 ZNF724A8MTY0 619 aa8.59□□□□□ -1.03
RABGGTA-221ENST00000561055 DVL2O14641 736 aa8.59□□□□□ -1.03
RABGGTA-221ENST00000561055 FFAR1O14842 300 aa8.59□□□□□ -1.03
RABGGTA-221ENST00000561055 AHSA1O95433 338 aa8.59□□□□□ -1.03
RABGGTA-221ENST00000561055 CGAP01215 116 aa8.59□□□□□ -1.03
RABGGTA-221ENST00000561055 CD8BP10966 210 aa8.59□□□□□ -1.03
RABGGTA-221ENST00000561055 RHCEP18577 417 aa8.59□□□□□ -1.03
RABGGTA-221ENST00000561055 FPR1P21462 350 aa8.59□□□□□ -1.03
RABGGTA-221ENST00000561055 IFNA8P32881 189 aa8.59□□□□□ -1.03
RABGGTA-221ENST00000561055 TAS2R41P59536 307 aa8.59□□□□□ -1.03
RABGGTA-221ENST00000561055 CBX1P83916 185 aa8.59□□□□□ -1.03
RABGGTA-221ENST00000561055 TFF3Q07654 80 aa8.59□□□□□ -1.03
RABGGTA-221ENST00000561055 ST3GAL3Q11203 375 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms