RNA–Protein interactions for RNA: ENST00000560858.1

SPG11-223, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 447 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-223ENST00000560858 NEDD8-MDP1E9PL57 170 aa2.26□□□□□ -2.05
SPG11-223ENST00000560858 H3BN98 237 aa2.26□□□□□ -2.05
SPG11-223ENST00000560858 J3QRE1 110 aa2.26□□□□□ -2.05
SPG11-223ENST00000560858 M0R3H8 397 aa2.26□□□□□ -2.05
SPG11-223ENST00000560858 ZNF197O14709 1029 aa2.26□□□□□ -2.05
SPG11-223ENST00000560858 TFECO14948 347 aaPredicted RBP2.26□□□□□ -2.05
SPG11-223ENST00000560858 SURF4O15260 269 aa2.26□□□□□ -2.05
SPG11-223ENST00000560858 TEX28O15482 410 aa2.26□□□□□ -2.05
SPG11-223ENST00000560858 LYRM1O43325 122 aa2.26□□□□□ -2.05
SPG11-223ENST00000560858 CHST10O43529 356 aa2.26□□□□□ -2.05
SPG11-223ENST00000560858 PI15O43692 258 aa2.26□□□□□ -2.05
SPG11-223ENST00000560858 VEGFDO43915 354 aa2.26□□□□□ -2.05
SPG11-223ENST00000560858 TMPRSS11DO60235 418 aa2.26□□□□□ -2.05
SPG11-223ENST00000560858 SLC19A2O60779 497 aa2.26□□□□□ -2.05
SPG11-223ENST00000560858 SH3BGRLO75368 114 aa2.26□□□□□ -2.05
SPG11-223ENST00000560858 SC5DO75845 299 aa2.26□□□□□ -2.05
SPG11-223ENST00000560858 FGF19O95750 216 aa2.26□□□□□ -2.05
SPG11-223ENST00000560858 LALBAP00709 142 aa2.26□□□□□ -2.05
SPG11-223ENST00000560858 GBAP04062 536 aa2.26□□□□□ -2.05
SPG11-223ENST00000560858 HLA-DPB1P04440 258 aa2.26□□□□□ -2.05
SPG11-223ENST00000560858 KLK1P06870 262 aa2.26□□□□□ -2.05
SPG11-223ENST00000560858 FHP07954 510 aa2.26□□□□□ -2.05
SPG11-223ENST00000560858 IGFBP1P08833 259 aaPredicted RBP2.26□□□□□ -2.05
SPG11-223ENST00000560858 IFI6P09912 130 aa2.26□□□□□ -2.05
SPG11-223ENST00000560858 TSPAN19P0C672 248 aa2.26□□□□□ -2.05
SPG11-223ENST00000560858 LINC00271P0C7V0 271 aa2.26□□□□□ -2.05
SPG11-223ENST00000560858 HNRNPCL4P0DMR1 293 aa2.26□□□□□ -2.05
SPG11-223ENST00000560858 PRKAR1AP10644 381 aa2.26□□□□□ -2.05
SPG11-223ENST00000560858 SLC2A2P11168 524 aaPredicted RBP2.26□□□□□ -2.05
SPG11-223ENST00000560858 TYRP14679 529 aa2.26□□□□□ -2.05
SPG11-223ENST00000560858 ARSBP15848 533 aa2.26□□□□□ -2.05
SPG11-223ENST00000560858 MYL12AP19105 171 aa2.26□□□□□ -2.05
SPG11-223ENST00000560858 CD53P19397 219 aa2.26□□□□□ -2.05
SPG11-223ENST00000560858 RPS4Y1P22090 263 aaKnown RBP2.26□□□□□ -2.05
SPG11-223ENST00000560858 POU1F1P28069 291 aa2.26□□□□□ -2.05
SPG11-223ENST00000560858 TEAD1P28347 426 aa2.26□□□□□ -2.05
SPG11-223ENST00000560858 HOXD10P28358 340 aa2.26□□□□□ -2.05
SPG11-223ENST00000560858 RBMS1P29558 406 aaKnown RBP2.26□□□□□ -2.05
SPG11-223ENST00000560858 PBLDP30039 288 aaPredicted RBP2.26□□□□□ -2.05
SPG11-223ENST00000560858 PPP2R1BP30154 601 aa2.26□□□□□ -2.05
SPG11-223ENST00000560858 SLC6A1P30531 599 aa2.26□□□□□ -2.05
SPG11-223ENST00000560858 HTR1FP30939 366 aa2.26□□□□□ -2.05
SPG11-223ENST00000560858 NTSP30990 170 aa2.26□□□□□ -2.05
SPG11-223ENST00000560858 PPM1AP35813 382 aa2.26□□□□□ -2.05
SPG11-223ENST00000560858 TRIM23P36406 574 aa2.26□□□□□ -2.05
SPG11-223ENST00000560858 HSD17B2P37059 387 aa2.26□□□□□ -2.05
SPG11-223ENST00000560858 CD79BP40259 229 aa2.26□□□□□ -2.05
SPG11-223ENST00000560858 CCR2P41597 374 aa2.26□□□□□ -2.05
SPG11-223ENST00000560858 RECQLP46063 649 aaPredicted RBP2.26□□□□□ -2.05
SPG11-223ENST00000560858 OMPP47874 163 aa2.26□□□□□ -2.05
SPG11-223ENST00000560858 MTNR1AP48039 350 aa2.26□□□□□ -2.05
SPG11-223ENST00000560858 EVX1P49640 407 aa2.26□□□□□ -2.05
SPG11-223ENST00000560858 AGFG1P52594 562 aaKnown RBP2.26□□□□□ -2.05
SPG11-223ENST00000560858 MAPK12P53778 367 aa2.26□□□□□ -2.05
SPG11-223ENST00000560858 CASP9P55211 416 aa2.26□□□□□ -2.05
SPG11-223ENST00000560858 CDH11P55287 796 aa2.26□□□□□ -2.05
SPG11-223ENST00000560858 RAG2P55895 527 aa2.26□□□□□ -2.05
SPG11-223ENST00000560858 P2RX3P56373 397 aa2.26□□□□□ -2.05
SPG11-223ENST00000560858 YPEL5P62699 121 aa2.26□□□□□ -2.05
SPG11-223ENST00000560858 ABATP80404 500 aa2.26□□□□□ -2.05
SPG11-223ENST00000560858 SHC2P98077 582 aa2.26□□□□□ -2.05
SPG11-223ENST00000560858 PSG6Q00889 435 aa2.26□□□□□ -2.05
SPG11-223ENST00000560858 FABP5Q01469 135 aa2.26□□□□□ -2.05
SPG11-223ENST00000560858 DMPKQ09013 629 aa2.26□□□□□ -2.05
SPG11-223ENST00000560858 RIPPLY1Q0D2K3 151 aa2.26□□□□□ -2.05
SPG11-223ENST00000560858 CNTN1Q12860 1018 aa2.26□□□□□ -2.05
SPG11-223ENST00000560858 HSPB3Q12988 150 aa2.26□□□□□ -2.05
SPG11-223ENST00000560858 TSPAN31Q12999 210 aa2.26□□□□□ -2.05
SPG11-223ENST00000560858 MAB21L1Q13394 359 aa2.26□□□□□ -2.05
SPG11-223ENST00000560858 GNA13Q14344 377 aa2.26□□□□□ -2.05
SPG11-223ENST00000560858 GINS1Q14691 196 aa2.26□□□□□ -2.05
SPG11-223ENST00000560858 TRAM2Q15035 370 aa2.26□□□□□ -2.05
SPG11-223ENST00000560858 P2RY14Q15391 338 aa2.26□□□□□ -2.05
SPG11-223ENST00000560858 CEBPEQ15744 281 aa2.26□□□□□ -2.05
SPG11-223ENST00000560858 TAB1Q15750 504 aa2.26□□□□□ -2.05
SPG11-223ENST00000560858 SYPL1Q16563 259 aa2.26□□□□□ -2.05
SPG11-223ENST00000560858 DECR1Q16698 335 aa2.26□□□□□ -2.05
SPG11-223ENST00000560858 MRGPRG-AS1Q2M3A8 158 aa2.26□□□□□ -2.05
SPG11-223ENST00000560858 TRIM60Q495X7 471 aa2.26□□□□□ -2.05
SPG11-223ENST00000560858 TMEM52BQ4KMG9 183 aa2.26□□□□□ -2.05
SPG11-223ENST00000560858 PLA1AQ53H76 456 aa2.26□□□□□ -2.05
SPG11-223ENST00000560858 ARHGAP15Q53QZ3 475 aa2.26□□□□□ -2.05
SPG11-223ENST00000560858 PYDC2Q56P42 97 aa2.26□□□□□ -2.05
SPG11-223ENST00000560858 PDZK1Q5T2W1 519 aa2.26□□□□□ -2.05
SPG11-223ENST00000560858 OR2G6Q5TZ20 316 aa2.26□□□□□ -2.05
SPG11-223ENST00000560858 HACD4Q5VWC8 232 aa2.26□□□□□ -2.05
SPG11-223ENST00000560858 PLPP4Q5VZY2 271 aa2.26□□□□□ -2.05
SPG11-223ENST00000560858 TRIQKQ629K1 86 aa2.26□□□□□ -2.05
SPG11-223ENST00000560858 HBMQ6B0K9 141 aa2.26□□□□□ -2.05
SPG11-223ENST00000560858 HIST2H2AA3Q6FI13 130 aa2.26□□□□□ -2.05
SPG11-223ENST00000560858 SIGIRRQ6IA17 410 aa2.26□□□□□ -2.05
SPG11-223ENST00000560858 LAMTOR1Q6IAA8 161 aa2.26□□□□□ -2.05
SPG11-223ENST00000560858 ACSM5Q6NUN0 579 aa2.26□□□□□ -2.05
SPG11-223ENST00000560858 MZT2BQ6NZ67 158 aa2.26□□□□□ -2.05
SPG11-223ENST00000560858 SLC27A4Q6P1M0 643 aa2.26□□□□□ -2.05
SPG11-223ENST00000560858 NIPAL3Q6P499 406 aa2.26□□□□□ -2.05
SPG11-223ENST00000560858 MZT2AQ6P582 158 aa2.26□□□□□ -2.05
SPG11-223ENST00000560858 TMEM220Q6QAJ8 160 aa2.26□□□□□ -2.05
SPG11-223ENST00000560858 SMARCD3Q6STE5 483 aa2.26□□□□□ -2.05
SPG11-223ENST00000560858 PLET1Q6UQ28 207 aa2.26□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms