RNA–Protein interactions for RNA: ENST00000560445.1

TPM1-223, Transcript of tropomyosin 1, humanhuman

TSL 3 BASIC

Gene TPM1, Length 485 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-223ENST00000560445 ZFHX3Q15911 3703 aa12.44□□□□□ -0.42
TPM1-223ENST00000560445 PRAMEF27A3QJZ7 478 aa12.44□□□□□ -0.42
TPM1-223ENST00000560445 A8MVM7 634 aa12.44□□□□□ -0.42
TPM1-223ENST00000560445 C9JVG2 144 aa12.44□□□□□ -0.42
TPM1-223ENST00000560445 TFPTP0C1Z6 253 aa12.44□□□□□ -0.42
TPM1-223ENST00000560445 CCNA2P20248 432 aa12.44□□□□□ -0.42
TPM1-223ENST00000560445 IGHV1-2P23083 117 aa12.44□□□□□ -0.42
TPM1-223ENST00000560445 GTF2E2P29084 291 aaKnown RBP12.44□□□□□ -0.42
TPM1-223ENST00000560445 H3F3AP84243 136 aa12.44□□□□□ -0.42
TPM1-223ENST00000560445 PPP2R2BQ00005 443 aa12.44□□□□□ -0.42
TPM1-223ENST00000560445 SLC9B1Q4ZJI4 515 aa12.44□□□□□ -0.42
TPM1-223ENST00000560445 COX20Q5RI15 118 aa12.44□□□□□ -0.42
TPM1-223ENST00000560445 AGAP6Q5VW22 663 aa12.44□□□□□ -0.42
TPM1-223ENST00000560445 HDXQ7Z353 690 aa12.44□□□□□ -0.42
TPM1-223ENST00000560445 CADM2Q8N3J6 435 aa12.44□□□□□ -0.42
TPM1-223ENST00000560445 ZNF433Q8N7K0 673 aaPredicted RBP12.44□□□□□ -0.42
TPM1-223ENST00000560445 POMGNT2Q8NAT1 580 aa12.44□□□□□ -0.42
TPM1-223ENST00000560445 BHLHE22Q8NFJ8 381 aaPredicted RBP12.44□□□□□ -0.42
TPM1-223ENST00000560445 SLC38A5Q8WUX1 472 aa12.44□□□□□ -0.42
TPM1-223ENST00000560445 IGFBPL1Q8WX77 278 aa12.44□□□□□ -0.42
TPM1-223ENST00000560445 TMEM45BQ96B21 275 aa12.44□□□□□ -0.42
TPM1-223ENST00000560445 ZG16BQ96DA0 208 aa12.44□□□□□ -0.42
TPM1-223ENST00000560445 ARL5BQ96KC2 179 aa12.44□□□□□ -0.42
TPM1-223ENST00000560445 ATP6V1G3Q96LB4 118 aa12.44□□□□□ -0.42
TPM1-223ENST00000560445 OR11A1Q9GZK7 315 aa12.44□□□□□ -0.42
TPM1-223ENST00000560445 EVA1AQ9H8M9 152 aa12.44□□□□□ -0.42
TPM1-223ENST00000560445 A4GALTQ9NPC4 353 aa12.44□□□□□ -0.42
TPM1-223ENST00000560445 OBP2BQ9NPH6 170 aa12.44□□□□□ -0.42
TPM1-223ENST00000560445 RPS6KB2Q9UBS0 482 aa12.44□□□□□ -0.42
TPM1-223ENST00000560445 POU2F3Q9UKI9 436 aa12.44□□□□□ -0.42
TPM1-223ENST00000560445 ZNF443Q9Y2A4 671 aaPredicted RBP12.44□□□□□ -0.42
TPM1-223ENST00000560445 AMDHD2Q9Y303 409 aa12.44□□□□□ -0.42
TPM1-223ENST00000560445 NSD1Q96L73 2696 aaPredicted RBP12.43□□□□□ -0.42
TPM1-223ENST00000560445 CLDN24A6NM45 220 aa12.43□□□□□ -0.42
TPM1-223ENST00000560445 AP3D1O14617 1153 aa12.43□□□□□ -0.42
TPM1-223ENST00000560445 RAD51DO75771 328 aa12.43□□□□□ -0.42
TPM1-223ENST00000560445 KRT33AO76009 404 aa12.43□□□□□ -0.42
TPM1-223ENST00000560445 AHSA1O95433 338 aa12.43□□□□□ -0.42
TPM1-223ENST00000560445 WNT11O96014 354 aa12.43□□□□□ -0.42
TPM1-223ENST00000560445 ETFAP13804 333 aa12.43□□□□□ -0.42
TPM1-223ENST00000560445 CDH11P55287 796 aa12.43□□□□□ -0.42
TPM1-223ENST00000560445 TSC22D1Q15714 1073 aa12.43□□□□□ -0.42
TPM1-223ENST00000560445 OTUD3Q5T2D3 398 aaPredicted RBP12.43□□□□□ -0.42
TPM1-223ENST00000560445 TMEM225Q6GV28 225 aa12.43□□□□□ -0.42
TPM1-223ENST00000560445 EPGNQ6UW88 154 aa12.43□□□□□ -0.42
TPM1-223ENST00000560445 ZNF775Q96BV0 537 aaPredicted RBP12.43□□□□□ -0.42
TPM1-223ENST00000560445 ZNF524Q96C55 264 aa12.43□□□□□ -0.42
TPM1-223ENST00000560445 TMEM19Q96HH6 336 aa12.43□□□□□ -0.42
TPM1-223ENST00000560445 HS6ST2Q96MM7 605 aa12.43□□□□□ -0.42
TPM1-223ENST00000560445 ZNF317Q96PQ6 595 aaPredicted RBP12.43□□□□□ -0.42
TPM1-223ENST00000560445 OR52B2Q96RD2 323 aa12.43□□□□□ -0.42
TPM1-223ENST00000560445 CCDC28BQ9BUN5 200 aa12.43□□□□□ -0.42
TPM1-223ENST00000560445 ADAM19Q9H013 955 aa12.43□□□□□ -0.42
TPM1-223ENST00000560445 FKRPQ9H9S5 495 aa12.43□□□□□ -0.42
TPM1-223ENST00000560445 BCL2L10Q9HD36 194 aa12.43□□□□□ -0.42
TPM1-223ENST00000560445 SELENONQ9NZV5 590 aa12.43□□□□□ -0.42
TPM1-223ENST00000560445 SLC13A4Q9UKG4 626 aa12.43□□□□□ -0.42
TPM1-223ENST00000560445 TMEM72A0PK05 275 aa12.42□□□□□ -0.42
TPM1-223ENST00000560445 PRORSD1PA6NEY8 169 aa12.42□□□□□ -0.42
TPM1-223ENST00000560445 AQP7P3A6NL99 342 aa12.42□□□□□ -0.42
TPM1-223ENST00000560445 EVPLLA8MZ36 301 aa12.42□□□□□ -0.42
TPM1-223ENST00000560445 CLIC1O00299 241 aa12.42□□□□□ -0.42
TPM1-223ENST00000560445 BCAS1O75363 584 aaPredicted RBP12.42□□□□□ -0.42
TPM1-223ENST00000560445 PLAUP00749 431 aa12.42□□□□□ -0.42
TPM1-223ENST00000560445 BMP2P12643 396 aa12.42□□□□□ -0.42
TPM1-223ENST00000560445 ETS2P15036 469 aa12.42□□□□□ -0.42
TPM1-223ENST00000560445 NCALDP61601 193 aa12.42□□□□□ -0.42
TPM1-223ENST00000560445 FAPQ12884 760 aa12.42□□□□□ -0.42
TPM1-223ENST00000560445 SLC17A1Q14916 467 aa12.42□□□□□ -0.42
TPM1-223ENST00000560445 RGNQ15493 299 aa12.42□□□□□ -0.42
TPM1-223ENST00000560445 ZNF311Q5JNZ3 666 aa12.42□□□□□ -0.42
TPM1-223ENST00000560445 ZNF836Q6ZNA1 936 aa12.42□□□□□ -0.42
TPM1-223ENST00000560445 HMGN2P46Q86SG4 172 aa12.42□□□□□ -0.42
TPM1-223ENST00000560445 STK35Q8TDR2 534 aa12.42□□□□□ -0.42
TPM1-223ENST00000560445 ADAD1Q96M93 576 aaKnown RBP12.42□□□□□ -0.42
TPM1-223ENST00000560445 TRIM2Q9C040 744 aa12.42□□□□□ -0.42
TPM1-223ENST00000560445 GSX1Q9H4S2 264 aaPredicted RBP12.42□□□□□ -0.42
TPM1-223ENST00000560445 C12orf10Q9HB07 376 aa12.42□□□□□ -0.42
TPM1-223ENST00000560445 MRGBPQ9NV56 204 aa12.42□□□□□ -0.42
TPM1-223ENST00000560445 CISD1Q9NZ45 108 aaKnown RBP12.42□□□□□ -0.42
TPM1-223ENST00000560445 TRIM33Q9UPN9 1127 aa12.42□□□□□ -0.42
TPM1-223ENST00000560445 RASD1Q9Y272 281 aa12.42□□□□□ -0.42
TPM1-223ENST00000560445 FLVCR1Q9Y5Y0 555 aa12.42□□□□□ -0.42
TPM1-223ENST00000560445 HIVEP2P31629 2446 aa12.42□□□□□ -0.42
TPM1-223ENST00000560445 LIPT2A6NK58 231 aa12.41□□□□□ -0.42
TPM1-223ENST00000560445 HMGB1P1B2RPK0 211 aaPredicted RBP12.41□□□□□ -0.42
TPM1-223ENST00000560445 OVOL3O00110 214 aa12.41□□□□□ -0.42
TPM1-223ENST00000560445 ABCD4O14678 606 aa12.41□□□□□ -0.42
TPM1-223ENST00000560445 AKAP8O43823 692 aaKnown RBP12.41□□□□□ -0.42
TPM1-223ENST00000560445 OR2T1O43869 369 aa12.41□□□□□ -0.42
TPM1-223ENST00000560445 IGHV3-9P01782 118 aa12.41□□□□□ -0.42
TPM1-223ENST00000560445 MPGP29372 298 aa12.41□□□□□ -0.42
TPM1-223ENST00000560445 PRKAR1BP31321 381 aa12.41□□□□□ -0.42
TPM1-223ENST00000560445 ATP4BP51164 291 aa12.41□□□□□ -0.42
TPM1-223ENST00000560445 MVDP53602 400 aa12.41□□□□□ -0.42
TPM1-223ENST00000560445 SH3BGRP55822 239 aaPredicted RBP12.41□□□□□ -0.42
TPM1-223ENST00000560445 PRPS1P60891 318 aa12.41□□□□□ -0.42
TPM1-223ENST00000560445 VEZF1Q14119 521 aa12.41□□□□□ -0.42
TPM1-223ENST00000560445 MFSD13AQ14CX5 517 aa12.41□□□□□ -0.42
TPM1-223ENST00000560445 OR7A5Q15622 319 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms