RNA–Protein interactions for RNA: ENST00000560371.5

TRAF3-208, Transcript of TNF receptor associated factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF3, Length 7,640 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-208ENST00000560371 ZNF736B4DX44 427 aaPredicted RBP12.52□□□□□ -0.4
TRAF3-208ENST00000560371 ZNF587BE7ETH6 402 aa12.52□□□□□ -0.4
TRAF3-208ENST00000560371 CTNSO60931 367 aa12.52□□□□□ -0.4
TRAF3-208ENST00000560371 FURINP09958 794 aa12.52□□□□□ -0.4
TRAF3-208ENST00000560371 SEMA3BQ13214 749 aa12.52□□□□□ -0.4
TRAF3-208ENST00000560371 CHDHQ8NE62 594 aaPredicted RBP12.52□□□□□ -0.4
TRAF3-208ENST00000560371 THSD1Q9NS62 852 aa12.52□□□□□ -0.4
TRAF3-208ENST00000560371 LHX6Q9UPM6 363 aa12.52□□□□□ -0.4
TRAF3-208ENST00000560371 D6RAR5 112 aa12.52□□□□□ -0.41
TRAF3-208ENST00000560371 HCRTR1O43613 425 aa12.52□□□□□ -0.41
TRAF3-208ENST00000560371 EIF1BO60739 113 aaKnown RBP12.52□□□□□ -0.41
TRAF3-208ENST00000560371 DLSTP36957 453 aa12.52□□□□□ -0.41
TRAF3-208ENST00000560371 SEC61A1P61619 476 aaKnown RBP12.52□□□□□ -0.41
TRAF3-208ENST00000560371 CYCSP99999 105 aaKnown RBP12.52□□□□□ -0.41
TRAF3-208ENST00000560371 ZNF585AQ6P3V2 769 aa12.52□□□□□ -0.41
TRAF3-208ENST00000560371 TMEM64Q6YI46 380 aa12.52□□□□□ -0.41
TRAF3-208ENST00000560371 MOB3CQ70IA8 216 aa12.52□□□□□ -0.41
TRAF3-208ENST00000560371 CCDC74AQ96AQ1 378 aa12.52□□□□□ -0.41
TRAF3-208ENST00000560371 S100PBPQ96BU1 408 aa12.52□□□□□ -0.41
TRAF3-208ENST00000560371 FOLH1BQ9HBA9 442 aa12.52□□□□□ -0.41
TRAF3-208ENST00000560371 TBC1D29Q9UFV1 150 aa12.52□□□□□ -0.41
TRAF3-208ENST00000560371 EMCNQ9ULC0 261 aa12.52□□□□□ -0.41
TRAF3-208ENST00000560371 DVL2O14641 736 aa12.52□□□□□ -0.41
TRAF3-208ENST00000560371 ITGB2P05107 769 aa12.52□□□□□ -0.41
TRAF3-208ENST00000560371 TMEM11P17152 192 aa12.52□□□□□ -0.41
TRAF3-208ENST00000560371 ATP1B3P54709 279 aa12.52□□□□□ -0.41
TRAF3-208ENST00000560371 BCL7AQ4VC05 210 aa12.52□□□□□ -0.41
TRAF3-208ENST00000560371 SSX3Q99909 188 aa12.52□□□□□ -0.41
TRAF3-208ENST00000560371 CDCP1Q9H5V8 836 aa12.52□□□□□ -0.41
TRAF3-208ENST00000560371 ELOVL3Q9HB03 270 aa12.52□□□□□ -0.41
TRAF3-208ENST00000560371 AP1G1O43747 822 aa12.52□□□□□ -0.41
TRAF3-208ENST00000560371 GLULP15104 373 aa12.52□□□□□ -0.41
TRAF3-208ENST00000560371 KIAA1024LP59773 190 aa12.52□□□□□ -0.41
TRAF3-208ENST00000560371 SLC6A19Q695T7 634 aa12.52□□□□□ -0.41
TRAF3-208ENST00000560371 NME7Q9Y5B8 376 aa12.52□□□□□ -0.41
TRAF3-208ENST00000560371 ZNF780AO75290 641 aaPredicted RBP12.52□□□□□ -0.41
TRAF3-208ENST00000560371 ARAFP10398 606 aa12.52□□□□□ -0.41
TRAF3-208ENST00000560371 ENPP1P22413 925 aa12.52□□□□□ -0.41
TRAF3-208ENST00000560371 CSNK1G2P78368 415 aa12.52□□□□□ -0.41
TRAF3-208ENST00000560371 C6orf15Q6UXA7 325 aaPredicted RBP12.52□□□□□ -0.41
TRAF3-208ENST00000560371 OR11L1Q8NGX0 322 aa12.52□□□□□ -0.41
TRAF3-208ENST00000560371 THOC3Q96J01 351 aaKnown RBP12.52□□□□□ -0.41
TRAF3-208ENST00000560371 FGF22Q9HCT0 170 aa12.52□□□□□ -0.41
TRAF3-208ENST00000560371 POLEQ07864 2286 aa12.52□□□□□ -0.41
TRAF3-208ENST00000560371 ALOX12BO75342 701 aa12.51□□□□□ -0.41
TRAF3-208ENST00000560371 SLC35E2P0CK97 266 aa12.51□□□□□ -0.41
TRAF3-208ENST00000560371 CD34P28906 385 aa12.51□□□□□ -0.41
TRAF3-208ENST00000560371 REEP5Q00765 189 aa12.51□□□□□ -0.41
TRAF3-208ENST00000560371 GPR157Q5UAW9 335 aa12.51□□□□□ -0.41
TRAF3-208ENST00000560371 SFRP4Q6FHJ7 346 aaPredicted RBP12.51□□□□□ -0.41
TRAF3-208ENST00000560371 MEPCEQ7L2J0 689 aaKnown RBP12.51□□□□□ -0.41
TRAF3-208ENST00000560371 FNDC8Q8TC99 324 aa12.51□□□□□ -0.41
TRAF3-208ENST00000560371 FOXRED1Q96CU9 486 aaPredicted RBP12.51□□□□□ -0.41
TRAF3-208ENST00000560371 ARL6Q9H0F7 186 aa12.51□□□□□ -0.41
TRAF3-208ENST00000560371 RALGAPA1Q6GYQ0 2036 aa12.51□□□□□ -0.41
TRAF3-208ENST00000560371 ZNF616Q08AN1 781 aa12.51□□□□□ -0.41
TRAF3-208ENST00000560371 SBSNQ6UWP8 590 aa12.51□□□□□ -0.41
TRAF3-208ENST00000560371 FAM57BQ71RH2 274 aa12.51□□□□□ -0.41
TRAF3-208ENST00000560371 EDARQ9UNE0 448 aa12.51□□□□□ -0.41
TRAF3-208ENST00000560371 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.51□□□□□ -0.41
TRAF3-208ENST00000560371 TNFSF12O43508 249 aa12.51□□□□□ -0.41
TRAF3-208ENST00000560371 RAB3DO95716 219 aa12.51□□□□□ -0.41
TRAF3-208ENST00000560371 IFNA1P01562 189 aa12.51□□□□□ -0.41
TRAF3-208ENST00000560371 SERPINA2P20848 420 aa12.51□□□□□ -0.41
TRAF3-208ENST00000560371 DRD5P21918 477 aa12.51□□□□□ -0.41
TRAF3-208ENST00000560371 IL2RGP31785 369 aa12.51□□□□□ -0.41
TRAF3-208ENST00000560371 PTGS2P35354 604 aa12.51□□□□□ -0.41
TRAF3-208ENST00000560371 RSPO2Q6UXX9 243 aaPredicted RBP12.51□□□□□ -0.41
TRAF3-208ENST00000560371 GDPGP1Q6ZNW5 385 aa12.51□□□□□ -0.41
TRAF3-208ENST00000560371 ASCC1Q8N9N2 400 aaKnown RBP12.51□□□□□ -0.41
TRAF3-208ENST00000560371 INTS6Q9UL03 887 aaKnown RBP12.51□□□□□ -0.41
TRAF3-208ENST00000560371 RIF1Q5UIP0 2472 aaKnown RBP12.51□□□□□ -0.41
TRAF3-208ENST00000560371 A0A1B0GV50 99 aa12.51□□□□□ -0.41
TRAF3-208ENST00000560371 PDE7AQ13946 482 aa12.51□□□□□ -0.41
TRAF3-208ENST00000560371 HBMQ6B0K9 141 aa12.51□□□□□ -0.41
TRAF3-208ENST00000560371 KIAA1211LQ6NV74 962 aa12.51□□□□□ -0.41
TRAF3-208ENST00000560371 RPS19BP1Q86WX3 136 aaKnown RBP12.51□□□□□ -0.41
TRAF3-208ENST00000560371 OR13C2Q8NGS9 318 aa12.51□□□□□ -0.41
TRAF3-208ENST00000560371 SNAPC3Q92966 411 aa12.51□□□□□ -0.41
TRAF3-208ENST00000560371 DUSP13Q9UII6 198 aa12.51□□□□□ -0.41
TRAF3-208ENST00000560371 ABHD16AO95870 558 aa12.51□□□□□ -0.41
TRAF3-208ENST00000560371 EPHA1P21709 976 aa12.51□□□□□ -0.41
TRAF3-208ENST00000560371 PGGHGQ32M88 737 aa12.51□□□□□ -0.41
TRAF3-208ENST00000560371 FRMPD2BQ6IN97 320 aa12.51□□□□□ -0.41
TRAF3-208ENST00000560371 LILRA3Q8N6C8 439 aaPredicted RBP12.51□□□□□ -0.41
TRAF3-208ENST00000560371 ALPK2Q86TB3 2170 aa12.51□□□□□ -0.41
TRAF3-208ENST00000560371 CX3CR1P49238 355 aa12.51□□□□□ -0.41
TRAF3-208ENST00000560371 KCTD20Q7Z5Y7 419 aa12.51□□□□□ -0.41
TRAF3-208ENST00000560371 MAELQ96JY0 434 aaKnown RBP12.51□□□□□ -0.41
TRAF3-208ENST00000560371 ZDHHC5Q9C0B5 715 aa12.51□□□□□ -0.41
TRAF3-208ENST00000560371 SLC25A18Q9H1K4 315 aa12.51□□□□□ -0.41
TRAF3-208ENST00000560371 GLIPR2Q9H4G4 154 aa12.51□□□□□ -0.41
TRAF3-208ENST00000560371 MBNL1Q9NR56 388 aaKnown RBP12.51□□□□□ -0.41
TRAF3-208ENST00000560371 DECR2Q9NUI1 292 aa12.51□□□□□ -0.41
TRAF3-208ENST00000560371 PCDHGA1Q9Y5H4 931 aa12.51□□□□□ -0.41
TRAF3-208ENST00000560371 GPR171O14626 319 aa12.5□□□□□ -0.41
TRAF3-208ENST00000560371 SORBS2O94875 1100 aaKnown RBP12.5□□□□□ -0.41
TRAF3-208ENST00000560371 SSTR4P31391 388 aa12.5□□□□□ -0.41
TRAF3-208ENST00000560371 ZNF684Q5T5D7 378 aa12.5□□□□□ -0.41
TRAF3-208ENST00000560371 YOD1Q5VVQ6 348 aaPredicted RBP12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 89.5 ms