RNA–Protein interactions for RNA: ENST00000559823.1

APH1B-206, Transcript of aph-1 homolog B, gamma-secretase subunit, humanhuman

TSL 3

Gene APH1B, Length 376 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APH1B-206ENST00000559823 CCDC71Q8IV32 467 aaPredicted RBP2.29□□□□□ -2.04
APH1B-206ENST00000559823 C12orf56Q8IXR9 622 aa2.29□□□□□ -2.04
APH1B-206ENST00000559823 STK40Q8N2I9 435 aa2.29□□□□□ -2.04
APH1B-206ENST00000559823 FBXL13Q8NEE6 735 aa2.29□□□□□ -2.04
APH1B-206ENST00000559823 OR6T1Q8NGN1 323 aa2.29□□□□□ -2.04
APH1B-206ENST00000559823 OR2T3Q8NH03 318 aa2.29□□□□□ -2.04
APH1B-206ENST00000559823 RHOXF1Q8NHV9 184 aa2.29□□□□□ -2.04
APH1B-206ENST00000559823 DQX1Q8TE96 717 aaKnown RBP2.29□□□□□ -2.04
APH1B-206ENST00000559823 PHYHIPQ92561 330 aa2.29□□□□□ -2.04
APH1B-206ENST00000559823 TMEM45BQ96B21 275 aa2.29□□□□□ -2.04
APH1B-206ENST00000559823 TMA16Q96EY4 203 aaKnown RBP2.29□□□□□ -2.04
APH1B-206ENST00000559823 PIWIL1Q96J94 861 aaKnown RBP2.29□□□□□ -2.04
APH1B-206ENST00000559823 SERAC1Q96JX3 654 aa2.29□□□□□ -2.04
APH1B-206ENST00000559823 NUP58Q9BVL2 599 aa2.29□□□□□ -2.04
APH1B-206ENST00000559823 CALN1Q9BXU9 219 aa2.29□□□□□ -2.04
APH1B-206ENST00000559823 DUSP16Q9BY84 665 aa2.29□□□□□ -2.04
APH1B-206ENST00000559823 TRIM4Q9C037 500 aa2.29□□□□□ -2.04
APH1B-206ENST00000559823 RAB17Q9H0T7 212 aa2.29□□□□□ -2.04
APH1B-206ENST00000559823 NEUROG2Q9H2A3 272 aa2.29□□□□□ -2.04
APH1B-206ENST00000559823 LIME1Q9H400 295 aa2.29□□□□□ -2.04
APH1B-206ENST00000559823 TMEM231Q9H6L2 316 aa2.29□□□□□ -2.04
APH1B-206ENST00000559823 SLC25A19Q9HC21 320 aa2.29□□□□□ -2.04
APH1B-206ENST00000559823 CSNK1G1Q9HCP0 422 aa2.29□□□□□ -2.04
APH1B-206ENST00000559823 HOMER3Q9NSC5 361 aa2.29□□□□□ -2.04
APH1B-206ENST00000559823 ZNF446Q9NWS9 450 aa2.29□□□□□ -2.04
APH1B-206ENST00000559823 ELOVL2Q9NXB9 296 aa2.29□□□□□ -2.04
APH1B-206ENST00000559823 FBXL12Q9NXK8 326 aa2.29□□□□□ -2.04
APH1B-206ENST00000559823 ERVK-18Q9QC07 812 aa2.29□□□□□ -2.04
APH1B-206ENST00000559823 AURKCQ9UQB9 309 aa2.29□□□□□ -2.04
APH1B-206ENST00000559823 ERVW-1Q9UQF0 538 aa2.29□□□□□ -2.04
APH1B-206ENST00000559823 KLHDC2Q9Y2U9 406 aa2.29□□□□□ -2.04
APH1B-206ENST00000559823 SLC6A5Q9Y345 797 aa2.29□□□□□ -2.04
APH1B-206ENST00000559823 NAALAD2Q9Y3Q0 740 aa2.29□□□□□ -2.04
APH1B-206ENST00000559823 GVINP1Q7Z2Y8 2422 aa2.29□□□□□ -2.04
APH1B-206ENST00000559823 CACNA1HO95180 2353 aa2.29□□□□□ -2.04
APH1B-206ENST00000559823 PTPRZ1P23471 2315 aaPredicted RBP2.29□□□□□ -2.04
APH1B-206ENST00000559823 SHROOM3Q8TF72 1996 aa2.29□□□□□ -2.04
APH1B-206ENST00000559823 CFAP47Q6ZTR5 3102 aa2.28□□□□□ -2.04
APH1B-206ENST00000559823 MAP1BP46821 2468 aaKnown RBP2.28□□□□□ -2.04
APH1B-206ENST00000559823 EP300Q09472 2414 aaPredicted RBP2.28□□□□□ -2.04
APH1B-206ENST00000559823 GPR179Q6PRD1 2367 aa2.28□□□□□ -2.04
APH1B-206ENST00000559823 GON4LQ3T8J9 2241 aa2.28□□□□□ -2.04
APH1B-206ENST00000559823 FAM92AA1XBS5 289 aa2.28□□□□□ -2.04
APH1B-206ENST00000559823 TMCO5BA8MYB1 307 aa2.28□□□□□ -2.04
APH1B-206ENST00000559823 K7EPI3 171 aa2.28□□□□□ -2.04
APH1B-206ENST00000559823 PDXKO00764 312 aa2.28□□□□□ -2.04
APH1B-206ENST00000559823 SH2D1BO14796 132 aa2.28□□□□□ -2.04
APH1B-206ENST00000559823 XPO1O14980 1071 aaKnown RBP2.28□□□□□ -2.04
APH1B-206ENST00000559823 CASC3O15234 703 aaKnown RBP2.28□□□□□ -2.04
APH1B-206ENST00000559823 SLC31A1O15431 190 aa2.28□□□□□ -2.04
APH1B-206ENST00000559823 SMPD2O60906 423 aa2.28□□□□□ -2.04
APH1B-206ENST00000559823 ZNF253O75346 499 aa2.28□□□□□ -2.04
APH1B-206ENST00000559823 NEBLO76041 1014 aa2.28□□□□□ -2.04
APH1B-206ENST00000559823 IFNB1P01574 187 aa2.28□□□□□ -2.04
APH1B-206ENST00000559823 GIG44P09565 113 aaPredicted RBP2.28□□□□□ -2.04
APH1B-206ENST00000559823 HIST1H2AGP0C0S8 130 aaPredicted RBP2.28□□□□□ -2.04
APH1B-206ENST00000559823 CCDC159P0C7I6 412 aa2.28□□□□□ -2.04
APH1B-206ENST00000559823 PNMA6AP0CW24 399 aaPredicted RBP2.28□□□□□ -2.04
APH1B-206ENST00000559823 DESP17661 470 aa2.28□□□□□ -2.04
APH1B-206ENST00000559823 PTPN4P29074 926 aa2.28□□□□□ -2.04
APH1B-206ENST00000559823 PRDX2P32119 198 aa2.28□□□□□ -2.04
APH1B-206ENST00000559823 GTF2H1P32780 548 aa2.28□□□□□ -2.04
APH1B-206ENST00000559823 TRIM23P36406 574 aa2.28□□□□□ -2.04
APH1B-206ENST00000559823 NPY2RP49146 381 aa2.28□□□□□ -2.04
APH1B-206ENST00000559823 AP3M2P53677 418 aa2.28□□□□□ -2.04
APH1B-206ENST00000559823 STX17P56962 302 aa2.28□□□□□ -2.04
APH1B-206ENST00000559823 DAOAP59103 153 aa2.28□□□□□ -2.04
APH1B-206ENST00000559823 RPS4XP62701 263 aaKnown RBP2.28□□□□□ -2.04
APH1B-206ENST00000559823 PPIAP62937 165 aaKnown RBP2.28□□□□□ -2.04
APH1B-206ENST00000559823 TRA2BP62995 288 aaKnown RBP2.28□□□□□ -2.04
APH1B-206ENST00000559823 MYBPC1Q00872 1141 aa2.28□□□□□ -2.04
APH1B-206ENST00000559823 GABPB1Q06547 395 aaPredicted RBP2.28□□□□□ -2.04
APH1B-206ENST00000559823 INCA1Q0VD86 236 aa2.28□□□□□ -2.04
APH1B-206ENST00000559823 FUT7Q11130 342 aa2.28□□□□□ -2.04
APH1B-206ENST00000559823 NME3Q13232 169 aa2.28□□□□□ -2.04
APH1B-206ENST00000559823 CUL2Q13617 745 aa2.28□□□□□ -2.04
APH1B-206ENST00000559823 KLF5Q13887 457 aaPredicted RBP2.28□□□□□ -2.04
APH1B-206ENST00000559823 SLC17A1Q14916 467 aa2.28□□□□□ -2.04
APH1B-206ENST00000559823 CST6Q15828 149 aa2.28□□□□□ -2.04
APH1B-206ENST00000559823 INAQ16352 499 aa2.28□□□□□ -2.04
APH1B-206ENST00000559823 CLPPQ16740 277 aaPredicted RBP2.28□□□□□ -2.04
APH1B-206ENST00000559823 C17orf58Q2M2W7 97 aa2.28□□□□□ -2.04
APH1B-206ENST00000559823 HSP90AA4PQ58FG1 418 aa2.28□□□□□ -2.04
APH1B-206ENST00000559823 SYPL2Q5VXT5 272 aa2.28□□□□□ -2.04
APH1B-206ENST00000559823 STEAP1BQ6NZ63 245 aa2.28□□□□□ -2.04
APH1B-206ENST00000559823 PMF1Q6P1K2 205 aa2.28□□□□□ -2.04
APH1B-206ENST00000559823 FAM159AQ6UWV7 190 aa2.28□□□□□ -2.04
APH1B-206ENST00000559823 SYVN1Q86TM6 617 aa2.28□□□□□ -2.04
APH1B-206ENST00000559823 TAC4Q86UU9 113 aa2.28□□□□□ -2.04
APH1B-206ENST00000559823 HIST2H2ABQ8IUE6 130 aaPredicted RBP2.28□□□□□ -2.04
APH1B-206ENST00000559823 ARHGAP18Q8N392 663 aa2.28□□□□□ -2.04
APH1B-206ENST00000559823 RNF148Q8N7C7 305 aa2.28□□□□□ -2.04
APH1B-206ENST00000559823 MINDY2Q8NBR6 621 aa2.28□□□□□ -2.04
APH1B-206ENST00000559823 CHDHQ8NE62 594 aaPredicted RBP2.28□□□□□ -2.04
APH1B-206ENST00000559823 GOLGA5Q8TBA6 731 aa2.28□□□□□ -2.04
APH1B-206ENST00000559823 HIST1H2ACQ93077 130 aa2.28□□□□□ -2.04
APH1B-206ENST00000559823 PNPLA2Q96AD5 504 aa2.28□□□□□ -2.04
APH1B-206ENST00000559823 C14orf79Q96F83 325 aa2.28□□□□□ -2.04
APH1B-206ENST00000559823 ZNF414Q96IQ9 312 aa2.28□□□□□ -2.04
APH1B-206ENST00000559823 ANKRD27Q96NW4 1050 aa2.28□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms