RNA–Protein interactions for RNA: ENST00000559340.1

LDLR-210, Transcript of low density lipoprotein receptor, humanhuman

TSL 5

Gene LDLR, Length 605 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-210ENST00000559340 H0YHG0 523 aa8.3□□□□□ -1.08
LDLR-210ENST00000559340 J3KTA2 159 aa8.3□□□□□ -1.08
LDLR-210ENST00000559340 TNFRSF11BO00300 401 aa8.3□□□□□ -1.08
LDLR-210ENST00000559340 TNFSF11O14788 317 aa8.3□□□□□ -1.08
LDLR-210ENST00000559340 CLOCKO15516 846 aa8.3□□□□□ -1.08
LDLR-210ENST00000559340 E2F6O75461 281 aa8.3□□□□□ -1.08
LDLR-210ENST00000559340 MT-ATP6P00846 226 aa8.3□□□□□ -1.08
LDLR-210ENST00000559340 LDLRP01130 860 aa8.3□□□□□ -1.08
LDLR-210ENST00000559340 MT-ND1P03886 318 aa8.3□□□□□ -1.08
LDLR-210ENST00000559340 ENPP1P22413 925 aa8.3□□□□□ -1.08
LDLR-210ENST00000559340 ACVR2AP27037 513 aa8.3□□□□□ -1.08
LDLR-210ENST00000559340 EIF1AXP47813 144 aaKnown RBP8.3□□□□□ -1.08
LDLR-210ENST00000559340 HMGA2P52926 109 aa8.3□□□□□ -1.08
LDLR-210ENST00000559340 CLDN15P56746 228 aa8.3□□□□□ -1.08
LDLR-210ENST00000559340 CLDN20P56880 219 aa8.3□□□□□ -1.08
LDLR-210ENST00000559340 HSF1Q00613 529 aa8.3□□□□□ -1.08
LDLR-210ENST00000559340 ANKDD1AQ495B1 522 aa8.3□□□□□ -1.08
LDLR-210ENST00000559340 FGD3Q5JSP0 725 aa8.3□□□□□ -1.08
LDLR-210ENST00000559340 FAM69AQ5T7M9 428 aa8.3□□□□□ -1.08
LDLR-210ENST00000559340 C1orf185Q5T7R7 199 aa8.3□□□□□ -1.08
LDLR-210ENST00000559340 MTFR2Q6P444 385 aa8.3□□□□□ -1.08
LDLR-210ENST00000559340 MAMDC2Q7Z304 686 aaPredicted RBP8.3□□□□□ -1.08
LDLR-210ENST00000559340 SLC43A2Q8N370 569 aa8.3□□□□□ -1.08
LDLR-210ENST00000559340 OR5M9Q8NGP3 310 aa8.3□□□□□ -1.08
LDLR-210ENST00000559340 OR10D3Q8NH80 312 aa8.3□□□□□ -1.08
LDLR-210ENST00000559340 PIGXQ8TBF5 258 aa8.3□□□□□ -1.08
LDLR-210ENST00000559340 NRBF2Q96F24 287 aa8.3□□□□□ -1.08
LDLR-210ENST00000559340 DHRS1Q96LJ7 313 aa8.3□□□□□ -1.08
LDLR-210ENST00000559340 ALPK1Q96QP1 1244 aa8.3□□□□□ -1.08
LDLR-210ENST00000559340 UCN2Q96RP3 112 aa8.3□□□□□ -1.08
LDLR-210ENST00000559340 TM9SF2Q99805 663 aa8.3□□□□□ -1.08
LDLR-210ENST00000559340 PRSS27Q9BQR3 290 aa8.3□□□□□ -1.08
LDLR-210ENST00000559340 TACO1Q9BSH4 297 aaKnown RBP8.3□□□□□ -1.08
LDLR-210ENST00000559340 ASPNQ9BXN1 380 aa8.3□□□□□ -1.08
LDLR-210ENST00000559340 TMEM185BQ9H7F4 350 aa8.3□□□□□ -1.08
LDLR-210ENST00000559340 C6orf203Q9P0P8 240 aaPredicted RBP8.3□□□□□ -1.08
LDLR-210ENST00000559340 SAMHD1Q9Y3Z3 626 aaKnown RBP8.3□□□□□ -1.08
LDLR-210ENST00000559340 ZNF175Q9Y473 711 aa8.3□□□□□ -1.08
LDLR-210ENST00000559340 TESMINQ9Y4I5 508 aa8.3□□□□□ -1.08
LDLR-210ENST00000559340 CORINQ9Y5Q5 1042 aa8.3□□□□□ -1.08
LDLR-210ENST00000559340 MYO18BQ8IUG5 2567 aa8.3□□□□□ -1.08
LDLR-210ENST00000559340 ALPK2Q86TB3 2170 aa8.29□□□□□ -1.08
LDLR-210ENST00000559340 TRGV8A0A0C4DH27 118 aa8.29□□□□□ -1.08
LDLR-210ENST00000559340 A0A1W2PNR3 127 aa8.29□□□□□ -1.08
LDLR-210ENST00000559340 CD8B2A6NJW9 211 aa8.29□□□□□ -1.08
LDLR-210ENST00000559340 PYCARD-AS1I3L0S3 204 aa8.29□□□□□ -1.08
LDLR-210ENST00000559340 FFAR1O14842 300 aa8.29□□□□□ -1.08
LDLR-210ENST00000559340 CXCL13O43927 109 aa8.29□□□□□ -1.08
LDLR-210ENST00000559340 NPIPB7O75200 414 aa8.29□□□□□ -1.08
LDLR-210ENST00000559340 DIRAS1O95057 198 aa8.29□□□□□ -1.08
LDLR-210ENST00000559340 PRSS23O95084 383 aa8.29□□□□□ -1.08
LDLR-210ENST00000559340 VAMP5O95183 116 aa8.29□□□□□ -1.08
LDLR-210ENST00000559340 OR6A2O95222 327 aa8.29□□□□□ -1.08
LDLR-210ENST00000559340 LYPD3O95274 346 aa8.29□□□□□ -1.08
LDLR-210ENST00000559340 OPN1LWP04000 364 aa8.29□□□□□ -1.08
LDLR-210ENST00000559340 IL11P20809 199 aa8.29□□□□□ -1.08
LDLR-210ENST00000559340 DNAJA1P31689 397 aaKnown RBP8.29□□□□□ -1.08
LDLR-210ENST00000559340 RPS5P46782 204 aaKnown RBP8.29□□□□□ -1.08
LDLR-210ENST00000559340 DIO1P49895 249 aa8.29□□□□□ -1.08
LDLR-210ENST00000559340 AGFG1P52594 562 aaKnown RBP8.29□□□□□ -1.08
LDLR-210ENST00000559340 SUCLG1P53597 346 aaKnown RBP8.29□□□□□ -1.08
LDLR-210ENST00000559340 PRKCDQ05655 676 aa8.29□□□□□ -1.08
LDLR-210ENST00000559340 FOXD4Q12950 439 aaPredicted RBP8.29□□□□□ -1.08
LDLR-210ENST00000559340 MYBPHQ13203 477 aa8.29□□□□□ -1.08
LDLR-210ENST00000559340 EIF2S3LQ2VIR3 472 aaKnown RBP8.29□□□□□ -1.08
LDLR-210ENST00000559340 IQCCQ4KMZ1 466 aa8.29□□□□□ -1.08
LDLR-210ENST00000559340 NSUN5P2Q63ZY6 315 aa8.29□□□□□ -1.08
LDLR-210ENST00000559340 OR2A2Q6IF42 318 aa8.29□□□□□ -1.08
LDLR-210ENST00000559340 PODNL1Q6PEZ8 512 aa8.29□□□□□ -1.08
LDLR-210ENST00000559340 MBOAT2Q6ZWT7 520 aa8.29□□□□□ -1.08
LDLR-210ENST00000559340 GGNQ86UU5 652 aa8.29□□□□□ -1.08
LDLR-210ENST00000559340 CD163Q86VB7 1156 aa8.29□□□□□ -1.08
LDLR-210ENST00000559340 NKAIN4Q8IVV8 208 aa8.29□□□□□ -1.08
LDLR-210ENST00000559340 MCEMP1Q8IX19 187 aa8.29□□□□□ -1.08
LDLR-210ENST00000559340 SCAIQ8N9R8 606 aa8.29□□□□□ -1.08
LDLR-210ENST00000559340 OR52J3Q8NH60 311 aa8.29□□□□□ -1.08
LDLR-210ENST00000559340 WNT2BQ93097 391 aa8.29□□□□□ -1.08
LDLR-210ENST00000559340 ZNF524Q96C55 264 aa8.29□□□□□ -1.08
LDLR-210ENST00000559340 SDCCAG3Q96C92 435 aa8.29□□□□□ -1.08
LDLR-210ENST00000559340 SLC25A36Q96CQ1 311 aa8.29□□□□□ -1.08
LDLR-210ENST00000559340 SGTBQ96EQ0 304 aa8.29□□□□□ -1.08
LDLR-210ENST00000559340 ZFP3Q96NJ6 502 aa8.29□□□□□ -1.08
LDLR-210ENST00000559340 NPAS1Q99742 590 aa8.29□□□□□ -1.08
LDLR-210ENST00000559340 ZNF426Q9BUY5 554 aa8.29□□□□□ -1.08
LDLR-210ENST00000559340 OR11A1Q9GZK7 315 aa8.29□□□□□ -1.08
LDLR-210ENST00000559340 FKRPQ9H9S5 495 aa8.29□□□□□ -1.08
LDLR-210ENST00000559340 S100A14Q9HCY8 104 aa8.29□□□□□ -1.08
LDLR-210ENST00000559340 NANSQ9NR45 359 aa8.29□□□□□ -1.08
LDLR-210ENST00000559340 GLRX2Q9NS18 164 aa8.29□□□□□ -1.08
LDLR-210ENST00000559340 PNPLA3Q9NST1 481 aa8.29□□□□□ -1.08
LDLR-210ENST00000559340 RHCGQ9UBD6 479 aa8.29□□□□□ -1.08
LDLR-210ENST00000559340 OSGIN2Q9Y236 505 aa8.29□□□□□ -1.08
LDLR-210ENST00000559340 BOD1L1Q8NFC6 3051 aa8.28□□□□□ -1.08
LDLR-210ENST00000559340 MAST4O15021 2626 aa8.28□□□□□ -1.08
LDLR-210ENST00000559340 A0A087WUU8 490 aa8.28□□□□□ -1.08
LDLR-210ENST00000559340 SH3PXD2BA1X283 911 aa8.28□□□□□ -1.08
LDLR-210ENST00000559340 ZC3H12DA2A288 527 aaKnown RBP8.28□□□□□ -1.08
LDLR-210ENST00000559340 LIPT2A6NK58 231 aa8.28□□□□□ -1.08
LDLR-210ENST00000559340 SLC22A20A6NK97 555 aa8.28□□□□□ -1.08
LDLR-210ENST00000559340 CLCA1A8K7I4 914 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms