RNA–Protein interactions for RNA: ENST00000559309.5

SNRPA1-207, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5

Gene SNRPA1, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-207ENST00000559309 TMEM179BQ7Z7N9 219 aa13.28□□□□□ -0.28
SNRPA1-207ENST00000559309 GALNT11Q8NCW6 608 aa13.28□□□□□ -0.28
SNRPA1-207ENST00000559309 OR2V1Q8NHB1 315 aa13.28□□□□□ -0.28
SNRPA1-207ENST00000559309 PYDC1Q8WXC3 89 aa13.28□□□□□ -0.28
SNRPA1-207ENST00000559309 PNPLA3Q9NST1 481 aa13.28□□□□□ -0.28
SNRPA1-207ENST00000559309 CLCF1Q9UBD9 225 aa13.28□□□□□ -0.28
SNRPA1-207ENST00000559309 STOML1Q9UBI4 398 aa13.28□□□□□ -0.28
SNRPA1-207ENST00000559309 TESMINQ9Y4I5 508 aa13.28□□□□□ -0.28
SNRPA1-207ENST00000559309 SVILO95425 2214 aa13.28□□□□□ -0.28
SNRPA1-207ENST00000559309 ARHGAP21Q5T5U3 1957 aa13.27□□□□□ -0.28
SNRPA1-207ENST00000559309 ARRDC5A6NEK1 342 aa13.27□□□□□ -0.29
SNRPA1-207ENST00000559309 AHRRA9YTQ3 701 aa13.27□□□□□ -0.29
SNRPA1-207ENST00000559309 NPIPA2E9PIF3 369 aa13.27□□□□□ -0.29
SNRPA1-207ENST00000559309 NPIPA3F8WFD2 350 aa13.27□□□□□ -0.29
SNRPA1-207ENST00000559309 GADD45GO95257 159 aa13.27□□□□□ -0.29
SNRPA1-207ENST00000559309 CST1P01037 141 aa13.27□□□□□ -0.29
SNRPA1-207ENST00000559309 HOXD4P09016 255 aaPredicted RBP13.27□□□□□ -0.29
SNRPA1-207ENST00000559309 IFNA8P32881 189 aa13.27□□□□□ -0.29
SNRPA1-207ENST00000559309 PTGER4P35408 488 aa13.27□□□□□ -0.29
SNRPA1-207ENST00000559309 OMPP47874 163 aa13.27□□□□□ -0.29
SNRPA1-207ENST00000559309 DIO1P49895 249 aa13.27□□□□□ -0.29
SNRPA1-207ENST00000559309 TLE1Q04724 770 aa13.27□□□□□ -0.29
SNRPA1-207ENST00000559309 ZNF74Q16587 644 aa13.27□□□□□ -0.29
SNRPA1-207ENST00000559309 TTC33Q6PID6 262 aaPredicted RBP13.27□□□□□ -0.29
SNRPA1-207ENST00000559309 POMZP3Q6PJE2 187 aa13.27□□□□□ -0.29
SNRPA1-207ENST00000559309 TBPL2Q6SJ96 375 aa13.27□□□□□ -0.29
SNRPA1-207ENST00000559309 GFRALQ6UXV0 394 aa13.27□□□□□ -0.29
SNRPA1-207ENST00000559309 NHLRC1Q6VVB1 395 aa13.27□□□□□ -0.29
SNRPA1-207ENST00000559309 TMPRSS11FQ6ZWK6 438 aa13.27□□□□□ -0.29
SNRPA1-207ENST00000559309 DOLPP1Q86YN1 238 aa13.27□□□□□ -0.29
SNRPA1-207ENST00000559309 ADPRHL1Q8NDY3 354 aa13.27□□□□□ -0.29
SNRPA1-207ENST00000559309 OR10D3Q8NH80 312 aa13.27□□□□□ -0.29
SNRPA1-207ENST00000559309 NRBF2Q96F24 287 aa13.27□□□□□ -0.29
SNRPA1-207ENST00000559309 ALPK1Q96QP1 1244 aa13.27□□□□□ -0.29
SNRPA1-207ENST00000559309 TUBA1CQ9BQE3 449 aa13.27□□□□□ -0.29
SNRPA1-207ENST00000559309 SRXN1Q9BYN0 137 aa13.27□□□□□ -0.29
SNRPA1-207ENST00000559309 TMEM185BQ9H7F4 350 aa13.27□□□□□ -0.29
SNRPA1-207ENST00000559309 C20orf141Q9NUB4 165 aa13.27□□□□□ -0.29
SNRPA1-207ENST00000559309 PAQR5Q9NXK6 330 aaPredicted RBP13.27□□□□□ -0.29
SNRPA1-207ENST00000559309 SELENONQ9NZV5 590 aa13.27□□□□□ -0.29
SNRPA1-207ENST00000559309 FAM215AQ9Y5M1 114 aa13.27□□□□□ -0.29
SNRPA1-207ENST00000559309 A0A1W2PNR3 127 aa13.26□□□□□ -0.29
SNRPA1-207ENST00000559309 NBASA2RRP1 2371 aa13.26□□□□□ -0.29
SNRPA1-207ENST00000559309 CD8B2A6NJW9 211 aa13.26□□□□□ -0.29
SNRPA1-207ENST00000559309 OR2T1O43869 369 aa13.26□□□□□ -0.29
SNRPA1-207ENST00000559309 SLC19A2O60779 497 aa13.26□□□□□ -0.29
SNRPA1-207ENST00000559309 WDR1O75083 606 aa13.26□□□□□ -0.29
SNRPA1-207ENST00000559309 DEAF1O75398 565 aaPredicted RBP13.26□□□□□ -0.29
SNRPA1-207ENST00000559309 MT-ATP6P00846 226 aa13.26□□□□□ -0.29
SNRPA1-207ENST00000559309 STSP08842 583 aa13.26□□□□□ -0.29
SNRPA1-207ENST00000559309 ASAH2BP0C7U1 165 aa13.26□□□□□ -0.29
SNRPA1-207ENST00000559309 FCGR1AP12314 374 aa13.26□□□□□ -0.29
SNRPA1-207ENST00000559309 FASP25445 335 aa13.26□□□□□ -0.29
SNRPA1-207ENST00000559309 SFTPDP35247 375 aa13.26□□□□□ -0.29
SNRPA1-207ENST00000559309 IDUAP35475 653 aa13.26□□□□□ -0.29
SNRPA1-207ENST00000559309 RPS4XP62701 263 aaKnown RBP13.26□□□□□ -0.29
SNRPA1-207ENST00000559309 SPIBQ01892 262 aa13.26□□□□□ -0.29
SNRPA1-207ENST00000559309 GUSBP1Q15486 140 aa13.26□□□□□ -0.29
SNRPA1-207ENST00000559309 C3AR1Q16581 482 aa13.26□□□□□ -0.29
SNRPA1-207ENST00000559309 EXOC3L2Q2M3D2 409 aa13.26□□□□□ -0.29
SNRPA1-207ENST00000559309 ACSF3Q4G176 576 aaPredicted RBP13.26□□□□□ -0.29
SNRPA1-207ENST00000559309 WLSQ5T9L3 541 aa13.26□□□□□ -0.29
SNRPA1-207ENST00000559309 C1orf94Q6P1W5 598 aa13.26□□□□□ -0.29
SNRPA1-207ENST00000559309 SEM1Q6ZVN7 128 aa13.26□□□□□ -0.29
SNRPA1-207ENST00000559309 ZNF771Q7L3S4 317 aaPredicted RBP13.26□□□□□ -0.29
SNRPA1-207ENST00000559309 ZER1Q7Z7L7 766 aa13.26□□□□□ -0.29
SNRPA1-207ENST00000559309 LINC00471Q8N535 108 aa13.26□□□□□ -0.29
SNRPA1-207ENST00000559309 MEIOBQ8N635 442 aa13.26□□□□□ -0.29
SNRPA1-207ENST00000559309 OR4K5Q8NGD3 323 aa13.26□□□□□ -0.29
SNRPA1-207ENST00000559309 PFN4Q8NHR9 129 aa13.26□□□□□ -0.29
SNRPA1-207ENST00000559309 LRTOMTQ8WZ04 291 aa13.26□□□□□ -0.29
SNRPA1-207ENST00000559309 PHF3Q92576 2039 aaKnown RBP13.26□□□□□ -0.29
SNRPA1-207ENST00000559309 CALHM2Q9HA72 323 aa13.26□□□□□ -0.29
SNRPA1-207ENST00000559309 ING1Q9UK53 422 aaPredicted RBP13.26□□□□□ -0.29
SNRPA1-207ENST00000559309 ZNF175Q9Y473 711 aa13.26□□□□□ -0.29
SNRPA1-207ENST00000559309 LOC102725191A0A1B0GVB3 256 aa13.25□□□□□ -0.29
SNRPA1-207ENST00000559309 MBD3L4A6NDZ8 208 aaPredicted RBP13.25□□□□□ -0.29
SNRPA1-207ENST00000559309 MBD3L3A6NE82 208 aaPredicted RBP13.25□□□□□ -0.29
SNRPA1-207ENST00000559309 MBD3L5A6NJ08 208 aaPredicted RBP13.25□□□□□ -0.29
SNRPA1-207ENST00000559309 KDM4EB2RXH2 506 aaPredicted RBP13.25□□□□□ -0.29
SNRPA1-207ENST00000559309 ZNF814B7Z6K7 855 aa13.25□□□□□ -0.29
SNRPA1-207ENST00000559309 TNFRSF11BO00300 401 aa13.25□□□□□ -0.29
SNRPA1-207ENST00000559309 EIF1AYO14602 144 aaKnown RBP13.25□□□□□ -0.29
SNRPA1-207ENST00000559309 TNFSF11O14788 317 aa13.25□□□□□ -0.29
SNRPA1-207ENST00000559309 SMAD9O15198 467 aaKnown RBP13.25□□□□□ -0.29
SNRPA1-207ENST00000559309 PIP5K1CO60331 668 aa13.25□□□□□ -0.29
SNRPA1-207ENST00000559309 OPN1LWP04000 364 aa13.25□□□□□ -0.29
SNRPA1-207ENST00000559309 GABRA1P14867 456 aa13.25□□□□□ -0.29
SNRPA1-207ENST00000559309 CCNA2P20248 432 aa13.25□□□□□ -0.29
SNRPA1-207ENST00000559309 FPR1P21462 350 aa13.25□□□□□ -0.29
SNRPA1-207ENST00000559309 DNAJA1P31689 397 aaKnown RBP13.25□□□□□ -0.29
SNRPA1-207ENST00000559309 IST1P53990 364 aa13.25□□□□□ -0.29
SNRPA1-207ENST00000559309 SRSF1Q07955 248 aaKnown RBP eCLIP13.25□□□□□ -0.29
SNRPA1-207ENST00000559309 MICAQ29983 383 aa13.25□□□□□ -0.29
SNRPA1-207ENST00000559309 NSUN5P2Q63ZY6 315 aa13.25□□□□□ -0.29
SNRPA1-207ENST00000559309 HBMQ6B0K9 141 aa13.25□□□□□ -0.29
SNRPA1-207ENST00000559309 ABLIM2Q6H8Q1 611 aa13.25□□□□□ -0.29
SNRPA1-207ENST00000559309 CD163Q86VB7 1156 aa13.25□□□□□ -0.29
SNRPA1-207ENST00000559309 P3H2Q8IVL5 708 aa13.25□□□□□ -0.29
SNRPA1-207ENST00000559309 NRMQ8IXM6 262 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms