RNA–Protein interactions for RNA: ENST00000558400.1

TPM1-213, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-213ENST00000558400 HCFC1P51610 2035 aa7.56□□□□□ -1.2
TPM1-213ENST00000558400 IGKV3D-15A0A087WSY6 115 aa7.55□□□□□ -1.2
TPM1-213ENST00000558400 TMEM72A0PK05 275 aa7.55□□□□□ -1.2
TPM1-213ENST00000558400 SH3D21A4FU49 640 aa7.55□□□□□ -1.2
TPM1-213ENST00000558400 ELOA3DA6NLF2 546 aaPredicted RBP7.55□□□□□ -1.2
TPM1-213ENST00000558400 A6NNC1 897 aa7.55□□□□□ -1.2
TPM1-213ENST00000558400 SNX3O60493 162 aa7.55□□□□□ -1.2
TPM1-213ENST00000558400 FMO6PO60774 539 aa7.55□□□□□ -1.2
TPM1-213ENST00000558400 CTAG2O75638 210 aa7.55□□□□□ -1.2
TPM1-213ENST00000558400 LGI1O95970 557 aa7.55□□□□□ -1.2
TPM1-213ENST00000558400 CCNA2P20248 432 aa7.55□□□□□ -1.2
TPM1-213ENST00000558400 FPR1P21462 350 aa7.55□□□□□ -1.2
TPM1-213ENST00000558400 LSP1P33241 339 aa7.55□□□□□ -1.2
TPM1-213ENST00000558400 PCGF2P35227 344 aa7.55□□□□□ -1.2
TPM1-213ENST00000558400 IDUAP35475 653 aa7.55□□□□□ -1.2
TPM1-213ENST00000558400 UGT2B10P36537 528 aa7.55□□□□□ -1.2
TPM1-213ENST00000558400 CPOXP36551 454 aa7.55□□□□□ -1.2
TPM1-213ENST00000558400 SLC16A1P53985 500 aa7.55□□□□□ -1.2
TPM1-213ENST00000558400 PCBP3P57721 371 aaKnown RBP7.55□□□□□ -1.2
TPM1-213ENST00000558400 RGS8P57771 180 aaPredicted RBP7.55□□□□□ -1.2
TPM1-213ENST00000558400 NCALDP61601 193 aa7.55□□□□□ -1.2
TPM1-213ENST00000558400 SF3A3Q12874 501 aaKnown RBP eCLIP7.55□□□□□ -1.2
TPM1-213ENST00000558400 CAPRIN1Q14444 709 aaKnown RBP7.55□□□□□ -1.2
TPM1-213ENST00000558400 VMACQ2NL98 169 aa7.55□□□□□ -1.2
TPM1-213ENST00000558400 ELOA3BQ3SY89 546 aa7.55□□□□□ -1.2
TPM1-213ENST00000558400 FBXW10Q5XX13 1052 aa7.55□□□□□ -1.2
TPM1-213ENST00000558400 FAM91A1Q658Y4 838 aa7.55□□□□□ -1.2
TPM1-213ENST00000558400 REP15Q6BDI9 236 aa7.55□□□□□ -1.2
TPM1-213ENST00000558400 TMEM225Q6GV28 225 aa7.55□□□□□ -1.2
TPM1-213ENST00000558400 ULK3Q6PHR2 472 aa7.55□□□□□ -1.2
TPM1-213ENST00000558400 PAQR6Q6TCH4 344 aa7.55□□□□□ -1.2
TPM1-213ENST00000558400 CCDC80Q76M96 950 aa7.55□□□□□ -1.2
TPM1-213ENST00000558400 RANBP3LQ86VV4 465 aaPredicted RBP7.55□□□□□ -1.2
TPM1-213ENST00000558400 SNX32Q86XE0 403 aa7.55□□□□□ -1.2
TPM1-213ENST00000558400 PTOV1Q86YD1 416 aa7.55□□□□□ -1.2
TPM1-213ENST00000558400 C10orf111Q8N326 155 aa7.55□□□□□ -1.2
TPM1-213ENST00000558400 STEAP2Q8NFT2 490 aa7.55□□□□□ -1.2
TPM1-213ENST00000558400 ELOA3Q8NG57 546 aa7.55□□□□□ -1.2
TPM1-213ENST00000558400 OR52E4Q8NGH9 312 aa7.55□□□□□ -1.2
TPM1-213ENST00000558400 SLC47A1Q96FL8 570 aa7.55□□□□□ -1.2
TPM1-213ENST00000558400 LURAP1Q96LR2 239 aa7.55□□□□□ -1.2
TPM1-213ENST00000558400 PSD2Q9BQI7 771 aa7.55□□□□□ -1.2
TPM1-213ENST00000558400 SF3B5Q9BWJ5 86 aaKnown RBP7.55□□□□□ -1.2
TPM1-213ENST00000558400 OR11A1Q9GZK7 315 aa7.55□□□□□ -1.2
TPM1-213ENST00000558400 RASSF1Q9NS23 344 aa7.55□□□□□ -1.2
TPM1-213ENST00000558400 TESQ9UGI8 421 aaKnown RBP7.55□□□□□ -1.2
TPM1-213ENST00000558400 CLEC4AQ9UMR7 237 aa7.55□□□□□ -1.2
TPM1-213ENST00000558400 MPDZO75970 2070 aa7.55□□□□□ -1.2
TPM1-213ENST00000558400 ANKHD1Q8IWZ3 2542 aaKnown RBP7.54□□□□□ -1.2
TPM1-213ENST00000558400 LIPT2A6NK58 231 aa7.54□□□□□ -1.2
TPM1-213ENST00000558400 SMAD9O15198 467 aaKnown RBP7.54□□□□□ -1.2
TPM1-213ENST00000558400 TPST1O60507 370 aa7.54□□□□□ -1.2
TPM1-213ENST00000558400 MRPL33O75394 65 aaKnown RBP7.54□□□□□ -1.2
TPM1-213ENST00000558400 AHSA1O95433 338 aa7.54□□□□□ -1.2
TPM1-213ENST00000558400 FESP07332 822 aa7.54□□□□□ -1.2
TPM1-213ENST00000558400 COX4I1P13073 169 aa7.54□□□□□ -1.2
TPM1-213ENST00000558400 PRG2P13727 222 aa7.54□□□□□ -1.2
TPM1-213ENST00000558400 PSMB1P20618 241 aaKnown RBP7.54□□□□□ -1.2
TPM1-213ENST00000558400 AQP1P29972 269 aa7.54□□□□□ -1.2
TPM1-213ENST00000558400 PRDX6P30041 224 aa7.54□□□□□ -1.2
TPM1-213ENST00000558400 OR3A2P47893 321 aa7.54□□□□□ -1.2
TPM1-213ENST00000558400 GZMMP51124 257 aa7.54□□□□□ -1.2
TPM1-213ENST00000558400 SEC24CP53992 1094 aa7.54□□□□□ -1.2
TPM1-213ENST00000558400 DMTNQ08495 405 aa7.54□□□□□ -1.2
TPM1-213ENST00000558400 SNTB1Q13884 538 aaKnown RBP7.54□□□□□ -1.2
TPM1-213ENST00000558400 CEACAM7Q14002 265 aa7.54□□□□□ -1.2
TPM1-213ENST00000558400 SELPLGQ14242 412 aa7.54□□□□□ -1.2
TPM1-213ENST00000558400 MFSD13AQ14CX5 517 aa7.54□□□□□ -1.2
TPM1-213ENST00000558400 DUSP7Q16829 419 aa7.54□□□□□ -1.2
TPM1-213ENST00000558400 EXOC3L2Q2M3D2 409 aa7.54□□□□□ -1.2
TPM1-213ENST00000558400 ALG10BQ5I7T1 473 aa7.54□□□□□ -1.2
TPM1-213ENST00000558400 SWT1Q5T5J6 900 aaKnown RBP7.54□□□□□ -1.2
TPM1-213ENST00000558400 C1QTNF12Q5T7M4 302 aa7.54□□□□□ -1.2
TPM1-213ENST00000558400 C1orf140Q5VVS0 124 aa7.54□□□□□ -1.2
TPM1-213ENST00000558400 ZNF613Q6PF04 617 aa7.54□□□□□ -1.2
TPM1-213ENST00000558400 C6orf89Q6UWU4 347 aa7.54□□□□□ -1.2
TPM1-213ENST00000558400 HACD2Q6Y1H2 254 aa7.54□□□□□ -1.2
TPM1-213ENST00000558400 ATG4DQ86TL0 474 aaPredicted RBP7.54□□□□□ -1.2
TPM1-213ENST00000558400 TMEM200AQ86VY9 491 aa7.54□□□□□ -1.2
TPM1-213ENST00000558400 CALHM3Q86XJ0 350 aa7.54□□□□□ -1.2
TPM1-213ENST00000558400 ZNF100Q8IYN0 542 aa7.54□□□□□ -1.2
TPM1-213ENST00000558400 MFSD8Q8NHS3 518 aa7.54□□□□□ -1.2
TPM1-213ENST00000558400 SLC38A4Q969I6 547 aa7.54□□□□□ -1.2
TPM1-213ENST00000558400 C3orf49Q96BT1 292 aa7.54□□□□□ -1.2
TPM1-213ENST00000558400 ZNF583Q96ND8 569 aa7.54□□□□□ -1.2
TPM1-213ENST00000558400 WFIKKN1Q96NZ8 548 aa7.54□□□□□ -1.2
TPM1-213ENST00000558400 EPYCQ99645 322 aa7.54□□□□□ -1.2
TPM1-213ENST00000558400 MED18Q9BUE0 208 aa7.54□□□□□ -1.2
TPM1-213ENST00000558400 POLDIP3Q9BY77 421 aaKnown RBP7.54□□□□□ -1.2
TPM1-213ENST00000558400 KLHL4Q9C0H6 718 aa7.54□□□□□ -1.2
TPM1-213ENST00000558400 C12orf49Q9H741 205 aa7.54□□□□□ -1.2
TPM1-213ENST00000558400 NGBQ9NPG2 151 aa7.54□□□□□ -1.2
TPM1-213ENST00000558400 ARMCX1Q9P291 453 aa7.54□□□□□ -1.2
TPM1-213ENST00000558400 BAG5Q9UL15 447 aa7.54□□□□□ -1.2
TPM1-213ENST00000558400 SLC9A8Q9Y2E8 581 aa7.54□□□□□ -1.2
TPM1-213ENST00000558400 NOSIPQ9Y314 301 aaKnown RBP7.54□□□□□ -1.2
TPM1-213ENST00000558400 KIAA1549Q9HCM3 1950 aa7.53□□□□□ -1.2
TPM1-213ENST00000558400 A0A087WUJ7 227 aa7.53□□□□□ -1.2
TPM1-213ENST00000558400 IGHV3-15A0A0B4J1V0 119 aa7.53□□□□□ -1.2
TPM1-213ENST00000558400 ELOVL7A1L3X0 281 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms