RNA–Protein interactions for RNA: ENST00000558282.5

CSPG4P12-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

BASIC

Gene CSPG4P12, Length 4,853 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-201ENST00000558282 SPP1P10451 314 aa11□□□□□ -0.65
CSPG4P12-201ENST00000558282 EPHA1P21709 976 aa11□□□□□ -0.65
CSPG4P12-201ENST00000558282 EVX1P49640 407 aa11□□□□□ -0.65
CSPG4P12-201ENST00000558282 CLDN10P78369 228 aa11□□□□□ -0.65
CSPG4P12-201ENST00000558282 SGCBQ16585 318 aa11□□□□□ -0.65
CSPG4P12-201ENST00000558282 SGCAQ16586 387 aa11□□□□□ -0.65
CSPG4P12-201ENST00000558282 SLC5A12Q1EHB4 618 aa11□□□□□ -0.65
CSPG4P12-201ENST00000558282 HSD17B13Q7Z5P4 300 aaPredicted RBP11□□□□□ -0.65
CSPG4P12-201ENST00000558282 CCDC190Q86UF4 302 aa11□□□□□ -0.65
CSPG4P12-201ENST00000558282 SLC43A2Q8N370 569 aa11□□□□□ -0.65
CSPG4P12-201ENST00000558282 KHSRPQ92945 711 aaKnown RBP eCLIP11□□□□□ -0.65
CSPG4P12-201ENST00000558282 BPIFA2Q96DR5 249 aa11□□□□□ -0.65
CSPG4P12-201ENST00000558282 DAZAP1Q96EP5 407 aaKnown RBP11□□□□□ -0.65
CSPG4P12-201ENST00000558282 DOK1Q99704 481 aa11□□□□□ -0.65
CSPG4P12-201ENST00000558282 RHBDD3Q9Y3P4 386 aa11□□□□□ -0.65
CSPG4P12-201ENST00000558282 SLIT2O94813 1529 aa11□□□□□ -0.65
CSPG4P12-201ENST00000558282 SGK494L7N484 410 aa11□□□□□ -0.65
CSPG4P12-201ENST00000558282 HNF1AP20823 631 aa11□□□□□ -0.65
CSPG4P12-201ENST00000558282 TRHRP34981 398 aaPredicted RBP11□□□□□ -0.65
CSPG4P12-201ENST00000558282 HNRNPKP61978 463 aaKnown RBP eCLIP11□□□□□ -0.65
CSPG4P12-201ENST00000558282 SEMA3BQ13214 749 aa11□□□□□ -0.65
CSPG4P12-201ENST00000558282 IAH1Q2TAA2 248 aaPredicted RBP11□□□□□ -0.65
CSPG4P12-201ENST00000558282 LRRC73Q5JTD7 316 aa11□□□□□ -0.65
CSPG4P12-201ENST00000558282 DPPA4Q7L190 304 aa11□□□□□ -0.65
CSPG4P12-201ENST00000558282 ZNF610Q8N9Z0 462 aa11□□□□□ -0.65
CSPG4P12-201ENST00000558282 UBAC2Q8NBM4 344 aa11□□□□□ -0.65
CSPG4P12-201ENST00000558282 C22orf15Q8WYQ4 148 aa11□□□□□ -0.65
CSPG4P12-201ENST00000558282 ACPTQ9BZG2 426 aa11□□□□□ -0.65
CSPG4P12-201ENST00000558282 TREX1Q9NSU2 369 aa11□□□□□ -0.65
CSPG4P12-201ENST00000558282 ZBTB7AO95365 584 aa11□□□□□ -0.65
CSPG4P12-201ENST00000558282 CALCBP10092 127 aa11□□□□□ -0.65
CSPG4P12-201ENST00000558282 CD68P34810 354 aaPredicted RBP11□□□□□ -0.65
CSPG4P12-201ENST00000558282 GLO1Q04760 184 aa11□□□□□ -0.65
CSPG4P12-201ENST00000558282 VITQ6UXI7 678 aa11□□□□□ -0.65
CSPG4P12-201ENST00000558282 OSTM1Q86WC4 334 aa11□□□□□ -0.65
CSPG4P12-201ENST00000558282 CREB3L4Q8TEY5 395 aa11□□□□□ -0.65
CSPG4P12-201ENST00000558282 HHIPL1Q96JK4 782 aa11□□□□□ -0.65
CSPG4P12-201ENST00000558282 C20orf24Q9BUV8 137 aa11□□□□□ -0.65
CSPG4P12-201ENST00000558282 KCNIP2Q9NS61 270 aa11□□□□□ -0.65
CSPG4P12-201ENST00000558282 SLAMF8Q9P0V8 285 aa11□□□□□ -0.65
CSPG4P12-201ENST00000558282 LGALS8O00214 317 aa10.99□□□□□ -0.65
CSPG4P12-201ENST00000558282 ZNF8P17098 575 aaPredicted RBP10.99□□□□□ -0.65
CSPG4P12-201ENST00000558282 SNRPEP62304 92 aaKnown RBP10.99□□□□□ -0.65
CSPG4P12-201ENST00000558282 HBA1P69905 142 aa10.99□□□□□ -0.65
CSPG4P12-201ENST00000558282 AKR1C1Q04828 323 aa10.99□□□□□ -0.65
CSPG4P12-201ENST00000558282 RAB35Q15286 201 aa10.99□□□□□ -0.65
CSPG4P12-201ENST00000558282 B3GLCTQ6Y288 498 aa10.99□□□□□ -0.65
CSPG4P12-201ENST00000558282 OR8J2Q8NGG1 315 aa10.99□□□□□ -0.65
CSPG4P12-201ENST00000558282 MYADMQ96S97 322 aa10.99□□□□□ -0.65
CSPG4P12-201ENST00000558282 RBM38Q9H0Z9 239 aaKnown RBP10.99□□□□□ -0.65
CSPG4P12-201ENST00000558282 OR1A2Q9Y585 309 aa10.99□□□□□ -0.65
CSPG4P12-201ENST00000558282 CCDC163A0A0D9SF12 145 aa10.99□□□□□ -0.65
CSPG4P12-201ENST00000558282 ZNF98A6NK75 572 aa10.99□□□□□ -0.65
CSPG4P12-201ENST00000558282 LDB2O43679 373 aa10.99□□□□□ -0.65
CSPG4P12-201ENST00000558282 H2AFB1P0C5Y9 115 aa10.99□□□□□ -0.65
CSPG4P12-201ENST00000558282 C6P13671 934 aa10.99□□□□□ -0.65
CSPG4P12-201ENST00000558282 FUT1P19526 365 aa10.99□□□□□ -0.65
CSPG4P12-201ENST00000558282 ARNTP27540 789 aa10.99□□□□□ -0.65
CSPG4P12-201ENST00000558282 OPRD1P41143 372 aa10.99□□□□□ -0.65
CSPG4P12-201ENST00000558282 ERVK-16P61578 105 aa10.99□□□□□ -0.65
CSPG4P12-201ENST00000558282 ZXDBP98169 803 aa10.99□□□□□ -0.65
CSPG4P12-201ENST00000558282 AQP6Q13520 282 aa10.99□□□□□ -0.65
CSPG4P12-201ENST00000558282 GUK1Q16774 197 aa10.99□□□□□ -0.65
CSPG4P12-201ENST00000558282 CCNJQ5T5M9 372 aa10.99□□□□□ -0.65
CSPG4P12-201ENST00000558282 CST9LP1Q5W188 147 aa10.99□□□□□ -0.65
CSPG4P12-201ENST00000558282 KCTD11Q693B1 232 aa10.99□□□□□ -0.65
CSPG4P12-201ENST00000558282 CDRT4Q8N9R6 151 aa10.99□□□□□ -0.65
CSPG4P12-201ENST00000558282 OR13C9Q8NGT0 318 aa10.99□□□□□ -0.65
CSPG4P12-201ENST00000558282 AMBRA1Q9C0C7 1298 aa10.99□□□□□ -0.65
CSPG4P12-201ENST00000558282 UBQLN3Q9H347 655 aa10.99□□□□□ -0.65
CSPG4P12-201ENST00000558282 CRLF2Q9HC73 371 aa10.99□□□□□ -0.65
CSPG4P12-201ENST00000558282 SLC23A1Q9UHI7 598 aa10.99□□□□□ -0.65
CSPG4P12-201ENST00000558282 MTMR11A4FU01 709 aa10.99□□□□□ -0.65
CSPG4P12-201ENST00000558282 M0R143 59 aa10.99□□□□□ -0.65
CSPG4P12-201ENST00000558282 DCTN6O00399 190 aa10.99□□□□□ -0.65
CSPG4P12-201ENST00000558282 GPR171O14626 319 aa10.99□□□□□ -0.65
CSPG4P12-201ENST00000558282 BCL2L11O43521 198 aa10.99□□□□□ -0.65
CSPG4P12-201ENST00000558282 TSPAN6O43657 245 aa10.99□□□□□ -0.65
CSPG4P12-201ENST00000558282 GPX5O75715 221 aa10.99□□□□□ -0.65
CSPG4P12-201ENST00000558282 PDGFBP01127 241 aaPredicted RBP10.99□□□□□ -0.65
CSPG4P12-201ENST00000558282 CPEP16870 476 aa10.99□□□□□ -0.65
CSPG4P12-201ENST00000558282 HNRNPA3P51991 378 aaKnown RBP10.99□□□□□ -0.65
CSPG4P12-201ENST00000558282 ENDOGQ14249 297 aaKnown RBP10.99□□□□□ -0.65
CSPG4P12-201ENST00000558282 ADAMTS18Q8TE60 1221 aa10.99□□□□□ -0.65
CSPG4P12-201ENST00000558282 PDLIM5Q96HC4 596 aaKnown RBP10.99□□□□□ -0.65
CSPG4P12-201ENST00000558282 MBOAT4Q96T53 435 aa10.99□□□□□ -0.65
CSPG4P12-201ENST00000558282 PIGQQ9BRB3 760 aa10.99□□□□□ -0.65
CSPG4P12-201ENST00000558282 HIPK2Q9H2X6 1198 aa10.99□□□□□ -0.65
CSPG4P12-201ENST00000558282 HTR2CP28335 458 aa10.98□□□□□ -0.65
CSPG4P12-201ENST00000558282 RAG2P55895 527 aa10.98□□□□□ -0.65
CSPG4P12-201ENST00000558282 TRA2BP62995 288 aaKnown RBP10.98□□□□□ -0.65
CSPG4P12-201ENST00000558282 FAM209AQ5JX71 171 aa10.98□□□□□ -0.65
CSPG4P12-201ENST00000558282 GNPNAT1Q96EK6 184 aaPredicted RBP10.98□□□□□ -0.65
CSPG4P12-201ENST00000558282 PGAP3Q96FM1 320 aaPredicted RBP10.98□□□□□ -0.65
CSPG4P12-201ENST00000558282 ANKRD19PQ9H560 264 aa10.98□□□□□ -0.65
CSPG4P12-201ENST00000558282 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.98□□□□□ -0.65
CSPG4P12-201ENST00000558282 STEAP1Q9UHE8 339 aa10.98□□□□□ -0.65
CSPG4P12-201ENST00000558282 PCDHB10Q9UN67 800 aa10.98□□□□□ -0.65
CSPG4P12-201ENST00000558282 MOKQ9UQ07 419 aa10.98□□□□□ -0.65
CSPG4P12-201ENST00000558282 OR6C68A6NDL8 312 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms