RNA–Protein interactions for RNA: ENST00000557477.1

PRPF39-212, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 724 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-212ENST00000557477 NPPAP01160 153 aa3.6□□□□□ -1.83
PRPF39-212ENST00000557477 RHOXF2BP0C7M4 288 aa3.6□□□□□ -1.83
PRPF39-212ENST00000557477 GOLGA8HP0CJ92 632 aa3.6□□□□□ -1.83
PRPF39-212ENST00000557477 PVRP15151 417 aa3.6□□□□□ -1.83
PRPF39-212ENST00000557477 BCL3P20749 454 aa3.6□□□□□ -1.83
PRPF39-212ENST00000557477 CFL1P23528 166 aaKnown RBP3.6□□□□□ -1.83
PRPF39-212ENST00000557477 GATA2P23769 480 aaPredicted RBP3.6□□□□□ -1.83
PRPF39-212ENST00000557477 DPP4P27487 766 aa3.6□□□□□ -1.83
PRPF39-212ENST00000557477 HMOX2P30519 316 aa3.6□□□□□ -1.83
PRPF39-212ENST00000557477 STK19P49842 368 aaPredicted RBP3.6□□□□□ -1.83
PRPF39-212ENST00000557477 KRTAP10-6P60371 365 aaPredicted RBP3.6□□□□□ -1.83
PRPF39-212ENST00000557477 RPS6P62753 249 aaKnown RBP3.6□□□□□ -1.83
PRPF39-212ENST00000557477 MRPS25P82663 173 aaKnown RBP3.6□□□□□ -1.83
PRPF39-212ENST00000557477 SIGLEC14Q08ET2 396 aa3.6□□□□□ -1.83
PRPF39-212ENST00000557477 RAB35Q15286 201 aa3.6□□□□□ -1.83
PRPF39-212ENST00000557477 TRIP10Q15642 601 aa3.6□□□□□ -1.83
PRPF39-212ENST00000557477 STK11Q15831 433 aa3.6□□□□□ -1.83
PRPF39-212ENST00000557477 Q3ZCU0 254 aa3.6□□□□□ -1.83
PRPF39-212ENST00000557477 TCTEX1D4Q5JR98 221 aa3.6□□□□□ -1.83
PRPF39-212ENST00000557477 SULT1C3Q6IMI6 304 aa3.6□□□□□ -1.83
PRPF39-212ENST00000557477 SLC51BQ86UW2 128 aa3.6□□□□□ -1.83
PRPF39-212ENST00000557477 ZNF573Q86YE8 665 aa3.6□□□□□ -1.83
PRPF39-212ENST00000557477 HIPK1Q86Z02 1210 aa3.6□□□□□ -1.83
PRPF39-212ENST00000557477 OR52K2Q8NGK3 314 aa3.6□□□□□ -1.83
PRPF39-212ENST00000557477 CDC26Q8NHZ8 85 aa3.6□□□□□ -1.83
PRPF39-212ENST00000557477 RFESDQ8TAC1 157 aa3.6□□□□□ -1.83
PRPF39-212ENST00000557477 TBCKQ8TEA7 893 aa3.6□□□□□ -1.83
PRPF39-212ENST00000557477 FAM222BQ8WU58 562 aa3.6□□□□□ -1.83
PRPF39-212ENST00000557477 ARL5BQ96KC2 179 aa3.6□□□□□ -1.83
PRPF39-212ENST00000557477 CNDP1Q96KN2 507 aa3.6□□□□□ -1.83
PRPF39-212ENST00000557477 CEP19Q96LK0 163 aa3.6□□□□□ -1.83
PRPF39-212ENST00000557477 TTC25Q96NG3 672 aa3.6□□□□□ -1.83
PRPF39-212ENST00000557477 VPS35Q96QK1 796 aa3.6□□□□□ -1.83
PRPF39-212ENST00000557477 MCCC1Q96RQ3 725 aaPredicted RBP3.6□□□□□ -1.83
PRPF39-212ENST00000557477 PSMB7Q99436 277 aa3.6□□□□□ -1.83
PRPF39-212ENST00000557477 RHOXF2Q9BQY4 288 aa3.6□□□□□ -1.83
PRPF39-212ENST00000557477 RPP25Q9BUL9 199 aaKnown RBP3.6□□□□□ -1.83
PRPF39-212ENST00000557477 ZNF416Q9BWM5 594 aa3.6□□□□□ -1.83
PRPF39-212ENST00000557477 TBC1D10AQ9BXI6 508 aa3.6□□□□□ -1.83
PRPF39-212ENST00000557477 MRPL13Q9BYD1 178 aaKnown RBP3.6□□□□□ -1.83
PRPF39-212ENST00000557477 FAM192AQ9GZU8 254 aa3.6□□□□□ -1.83
PRPF39-212ENST00000557477 STMN4Q9H169 189 aaPredicted RBP3.6□□□□□ -1.83
PRPF39-212ENST00000557477 ZBP1Q9H171 429 aa3.6□□□□□ -1.83
PRPF39-212ENST00000557477 NCOR1P1Q9H4R4 102 aa3.6□□□□□ -1.83
PRPF39-212ENST00000557477 GPN2Q9H9Y4 310 aaPredicted RBP3.6□□□□□ -1.83
PRPF39-212ENST00000557477 CALHM2Q9HA72 323 aa3.6□□□□□ -1.83
PRPF39-212ENST00000557477 SLC35D1Q9NTN3 355 aa3.6□□□□□ -1.83
PRPF39-212ENST00000557477 AGPAT5Q9NUQ2 364 aa3.6□□□□□ -1.83
PRPF39-212ENST00000557477 SDAD1Q9NVU7 687 aaKnown RBP eCLIP3.6□□□□□ -1.83
PRPF39-212ENST00000557477 RMND1Q9NWS8 449 aa3.6□□□□□ -1.83
PRPF39-212ENST00000557477 SLC39A1Q9NY26 324 aa3.6□□□□□ -1.83
PRPF39-212ENST00000557477 SH3BGRL2Q9UJC5 107 aa3.6□□□□□ -1.83
PRPF39-212ENST00000557477 GGA2Q9UJY4 613 aa3.6□□□□□ -1.83
PRPF39-212ENST00000557477 DUSP12Q9UNI6 340 aa3.6□□□□□ -1.83
PRPF39-212ENST00000557477 B9D1Q9UPM9 204 aa3.6□□□□□ -1.83
PRPF39-212ENST00000557477 EXOSC1Q9Y3B2 195 aaKnown RBP3.6□□□□□ -1.83
PRPF39-212ENST00000557477 ADGRA3Q8IWK6 1321 aa3.6□□□□□ -1.83
PRPF39-212ENST00000557477 MYH4Q9Y623 1939 aa3.6□□□□□ -1.83
PRPF39-212ENST00000557477 MYO9BQ13459 2157 aa3.59□□□□□ -1.83
PRPF39-212ENST00000557477 ZSCAN5CA6NGD5 496 aaPredicted RBP3.59□□□□□ -1.83
PRPF39-212ENST00000557477 GOLGA8JA6NMD2 632 aa3.59□□□□□ -1.83
PRPF39-212ENST00000557477 OR5K4A6NMS3 321 aa3.59□□□□□ -1.83
PRPF39-212ENST00000557477 WASH3PC4AMC7 463 aa3.59□□□□□ -1.83
PRPF39-212ENST00000557477 SAP18O00422 153 aaKnown RBP3.59□□□□□ -1.83
PRPF39-212ENST00000557477 TRDMT1O14717 391 aaKnown RBP3.59□□□□□ -1.83
PRPF39-212ENST00000557477 HPP00738 406 aa3.59□□□□□ -1.83
PRPF39-212ENST00000557477 HLA-DRAP01903 254 aa3.59□□□□□ -1.83
PRPF39-212ENST00000557477 MMP1P03956 469 aa3.59□□□□□ -1.83
PRPF39-212ENST00000557477 KRT6BP04259 564 aa3.59□□□□□ -1.83
PRPF39-212ENST00000557477 CALM1P0DP23 149 aa3.59□□□□□ -1.83
PRPF39-212ENST00000557477 CALM2P0DP24 149 aa3.59□□□□□ -1.83
PRPF39-212ENST00000557477 CALM3P0DP25 149 aa3.59□□□□□ -1.83
PRPF39-212ENST00000557477 CALCBP10092 127 aa3.59□□□□□ -1.83
PRPF39-212ENST00000557477 THRBP10828 461 aa3.59□□□□□ -1.83
PRPF39-212ENST00000557477 PDHBP11177 359 aa3.59□□□□□ -1.83
PRPF39-212ENST00000557477 TOP1P11387 765 aaKnown RBP3.59□□□□□ -1.83
PRPF39-212ENST00000557477 PRKACAP17612 351 aa3.59□□□□□ -1.83
PRPF39-212ENST00000557477 PBLDP30039 288 aaPredicted RBP3.59□□□□□ -1.83
PRPF39-212ENST00000557477 DLSTP36957 453 aa3.59□□□□□ -1.83
PRPF39-212ENST00000557477 ELK3P41970 407 aa3.59□□□□□ -1.83
PRPF39-212ENST00000557477 BRCC3P46736 316 aa3.59□□□□□ -1.83
PRPF39-212ENST00000557477 KRT6CP48668 564 aa3.59□□□□□ -1.83
PRPF39-212ENST00000557477 AP3M2P53677 418 aa3.59□□□□□ -1.83
PRPF39-212ENST00000557477 CUL1Q13616 776 aa3.59□□□□□ -1.83
PRPF39-212ENST00000557477 UBE2V2Q15819 145 aa3.59□□□□□ -1.83
PRPF39-212ENST00000557477 MOGQ16653 247 aa3.59□□□□□ -1.83
PRPF39-212ENST00000557477 SBK1Q52WX2 424 aa3.59□□□□□ -1.83
PRPF39-212ENST00000557477 TMEM41BQ5BJD5 291 aa3.59□□□□□ -1.83
PRPF39-212ENST00000557477 RIPPLY2Q5TAB7 128 aa3.59□□□□□ -1.83
PRPF39-212ENST00000557477 SEL1L3Q68CR1 1132 aa3.59□□□□□ -1.83
PRPF39-212ENST00000557477 NIPAL3Q6P499 406 aa3.59□□□□□ -1.83
PRPF39-212ENST00000557477 TTC23LQ6PF05 361 aa3.59□□□□□ -1.83
PRPF39-212ENST00000557477 BTNL3Q6UXE8 466 aa3.59□□□□□ -1.83
PRPF39-212ENST00000557477 WASH2PQ6VEQ5 465 aa3.59□□□□□ -1.83
PRPF39-212ENST00000557477 MYPOPQ86VE0 399 aaPredicted RBP3.59□□□□□ -1.83
PRPF39-212ENST00000557477 CBWD2Q8IUF1 395 aa3.59□□□□□ -1.83
PRPF39-212ENST00000557477 TBC1D21Q8IYX1 336 aa3.59□□□□□ -1.83
PRPF39-212ENST00000557477 OR2L2Q8NH16 312 aa3.59□□□□□ -1.83
PRPF39-212ENST00000557477 PINX1Q96BK5 328 aaKnown RBP3.59□□□□□ -1.83
PRPF39-212ENST00000557477 UPRTQ96BW1 309 aa3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms