RNA–Protein interactions for RNA: ENST00000557454.1

NEDD1-211, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 4

Gene NEDD1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-211ENST00000557454 SLC12A4Q9UP95 1085 aa7.93□□□□□ -1.14
NEDD1-211ENST00000557454 ACOT9Q9Y305 439 aa7.93□□□□□ -1.14
NEDD1-211ENST00000557454 POMT1Q9Y6A1 747 aa7.93□□□□□ -1.14
NEDD1-211ENST00000557454 ZNF503-AS2A6NEH8 195 aa7.92□□□□□ -1.14
NEDD1-211ENST00000557454 AGAP5A6NIR3 686 aa7.92□□□□□ -1.14
NEDD1-211ENST00000557454 KRT14P02533 472 aa7.92□□□□□ -1.14
NEDD1-211ENST00000557454 JUNP05412 331 aaKnown RBP7.92□□□□□ -1.14
NEDD1-211ENST00000557454 CD80P33681 288 aa7.92□□□□□ -1.14
NEDD1-211ENST00000557454 MPIP34949 423 aa7.92□□□□□ -1.14
NEDD1-211ENST00000557454 ARL1P40616 181 aaPredicted RBP7.92□□□□□ -1.14
NEDD1-211ENST00000557454 MAGEA8P43361 318 aa7.92□□□□□ -1.14
NEDD1-211ENST00000557454 NCBP2P52298 156 aaKnown RBP eCLIP7.92□□□□□ -1.14
NEDD1-211ENST00000557454 SLC12A2P55011 1212 aa7.92□□□□□ -1.14
NEDD1-211ENST00000557454 SUMO3P55854 103 aaPredicted RBP7.92□□□□□ -1.14
NEDD1-211ENST00000557454 SEC61A1P61619 476 aaKnown RBP7.92□□□□□ -1.14
NEDD1-211ENST00000557454 HERPUD1Q15011 391 aa7.92□□□□□ -1.14
NEDD1-211ENST00000557454 QPRTQ15274 297 aa7.92□□□□□ -1.14
NEDD1-211ENST00000557454 NKPD1Q17RQ9 610 aa7.92□□□□□ -1.14
NEDD1-211ENST00000557454 TIGD2Q4W5G0 525 aa7.92□□□□□ -1.14
NEDD1-211ENST00000557454 ATP6AP1LQ52LC2 224 aa7.92□□□□□ -1.14
NEDD1-211ENST00000557454 SGO1Q5FBB7 561 aa7.92□□□□□ -1.14
NEDD1-211ENST00000557454 COX20Q5RI15 118 aa7.92□□□□□ -1.14
NEDD1-211ENST00000557454 USP51Q70EK9 711 aa7.92□□□□□ -1.14
NEDD1-211ENST00000557454 MEPCEQ7L2J0 689 aaKnown RBP7.92□□□□□ -1.14
NEDD1-211ENST00000557454 LSRQ86X29 649 aaPredicted RBP7.92□□□□□ -1.14
NEDD1-211ENST00000557454 CNGA4Q8IV77 575 aa7.92□□□□□ -1.14
NEDD1-211ENST00000557454 VSTM4Q8IW00 320 aa7.92□□□□□ -1.14
NEDD1-211ENST00000557454 C1orf52Q8N6N3 182 aaKnown RBP7.92□□□□□ -1.14
NEDD1-211ENST00000557454 NAT8LQ8N9F0 302 aa7.92□□□□□ -1.14
NEDD1-211ENST00000557454 ZSCAN4Q8NAM6 433 aaPredicted RBP7.92□□□□□ -1.14
NEDD1-211ENST00000557454 RFWD2Q8NHY2 731 aa7.92□□□□□ -1.14
NEDD1-211ENST00000557454 LRRC39Q96DD0 335 aa7.92□□□□□ -1.14
NEDD1-211ENST00000557454 CFAP36Q96G28 342 aa7.92□□□□□ -1.14
NEDD1-211ENST00000557454 ALKBH3Q96Q83 286 aaPredicted RBP7.92□□□□□ -1.14
NEDD1-211ENST00000557454 C16orf95Q9H693 158 aa7.92□□□□□ -1.14
NEDD1-211ENST00000557454 MOV10Q9HCE1 1003 aaKnown RBP7.92□□□□□ -1.14
NEDD1-211ENST00000557454 ZNF346Q9UL40 294 aaKnown RBP7.92□□□□□ -1.14
NEDD1-211ENST00000557454 POLR3KQ9Y2Y1 108 aaPredicted RBP7.92□□□□□ -1.14
NEDD1-211ENST00000557454 REXO2Q9Y3B8 237 aaKnown RBP7.92□□□□□ -1.14
NEDD1-211ENST00000557454 ETV2O00321 342 aaPredicted RBP7.91□□□□□ -1.14
NEDD1-211ENST00000557454 KRT33AO76009 404 aa7.91□□□□□ -1.14
NEDD1-211ENST00000557454 ZNF432O94892 652 aa7.91□□□□□ -1.14
NEDD1-211ENST00000557454 KCNK2O95069 426 aa7.91□□□□□ -1.14
NEDD1-211ENST00000557454 TFPIP10646 304 aa7.91□□□□□ -1.14
NEDD1-211ENST00000557454 BCKDHAP12694 445 aa7.91□□□□□ -1.14
NEDD1-211ENST00000557454 CBR1P16152 277 aa7.91□□□□□ -1.14
NEDD1-211ENST00000557454 CCR4P51679 360 aa7.91□□□□□ -1.14
NEDD1-211ENST00000557454 TRA2BP62995 288 aaKnown RBP7.91□□□□□ -1.14
NEDD1-211ENST00000557454 TEKQ02763 1124 aa7.91□□□□□ -1.14
NEDD1-211ENST00000557454 PAX8Q06710 450 aa7.91□□□□□ -1.14
NEDD1-211ENST00000557454 TBX2Q13207 712 aaPredicted RBP7.91□□□□□ -1.14
NEDD1-211ENST00000557454 CDK5R2Q13319 367 aa7.91□□□□□ -1.14
NEDD1-211ENST00000557454 PRSS53Q2L4Q9 553 aa7.91□□□□□ -1.14
NEDD1-211ENST00000557454 MMEL1Q495T6 779 aa7.91□□□□□ -1.14
NEDD1-211ENST00000557454 CCNJQ5T5M9 372 aa7.91□□□□□ -1.14
NEDD1-211ENST00000557454 FAM219BQ5XKK7 198 aa7.91□□□□□ -1.14
NEDD1-211ENST00000557454 TTC19Q6DKK2 380 aaPredicted RBP7.91□□□□□ -1.14
NEDD1-211ENST00000557454 GOLGA7Q7Z5G4 137 aa7.91□□□□□ -1.14
NEDD1-211ENST00000557454 ABHD12BQ7Z5M8 362 aaPredicted RBP7.91□□□□□ -1.14
NEDD1-211ENST00000557454 C1orf174Q8IYL3 243 aa7.91□□□□□ -1.14
NEDD1-211ENST00000557454 CCDC170Q8IYT3 715 aa7.91□□□□□ -1.14
NEDD1-211ENST00000557454 ALDH16A1Q8IZ83 802 aa7.91□□□□□ -1.14
NEDD1-211ENST00000557454 LYG1Q8N1E2 194 aa7.91□□□□□ -1.14
NEDD1-211ENST00000557454 TMCO5AQ8N6Q1 288 aa7.91□□□□□ -1.14
NEDD1-211ENST00000557454 POMGNT2Q8NAT1 580 aa7.91□□□□□ -1.14
NEDD1-211ENST00000557454 MAGEE2Q8TD90 523 aaPredicted RBP7.91□□□□□ -1.14
NEDD1-211ENST00000557454 SSMEM1Q8WWF3 244 aa7.91□□□□□ -1.14
NEDD1-211ENST00000557454 ARL8AQ96BM9 186 aa7.91□□□□□ -1.14
NEDD1-211ENST00000557454 UPRTQ96BW1 309 aa7.91□□□□□ -1.14
NEDD1-211ENST00000557454 AURKBQ96GD4 344 aaPredicted RBP7.91□□□□□ -1.14
NEDD1-211ENST00000557454 IPPKQ9H8X2 491 aa7.91□□□□□ -1.14
NEDD1-211ENST00000557454 DUSP13Q9UII6 198 aa7.91□□□□□ -1.14
NEDD1-211ENST00000557454 ZNF816-ZNF321PA0A0X1KG74 233 aa7.9□□□□□ -1.14
NEDD1-211ENST00000557454 C17orf100A8MU93 164 aa7.9□□□□□ -1.14
NEDD1-211ENST00000557454 MYO1GB0I1T2 1018 aa7.9□□□□□ -1.14
NEDD1-211ENST00000557454 ZNF587BE7ETH6 402 aa7.9□□□□□ -1.14
NEDD1-211ENST00000557454 NKX2-2O95096 273 aa7.9□□□□□ -1.14
NEDD1-211ENST00000557454 PMS2P2O95744 297 aa7.9□□□□□ -1.14
NEDD1-211ENST00000557454 PPIAL4GP0DN37 164 aa7.9□□□□□ -1.14
NEDD1-211ENST00000557454 IGLL1P15814 213 aa7.9□□□□□ -1.14
NEDD1-211ENST00000557454 TYK2P29597 1187 aa7.9□□□□□ -1.14
NEDD1-211ENST00000557454 GLRXP35754 106 aa7.9□□□□□ -1.14
NEDD1-211ENST00000557454 KRTAP10-11P60412 298 aa7.9□□□□□ -1.14
NEDD1-211ENST00000557454 LCP2Q13094 533 aa7.9□□□□□ -1.14
NEDD1-211ENST00000557454 IFT88Q13099 833 aa7.9□□□□□ -1.14
NEDD1-211ENST00000557454 HNRNPA0Q13151 305 aaKnown RBP7.9□□□□□ -1.14
NEDD1-211ENST00000557454 GTF2H2Q13888 395 aa7.9□□□□□ -1.14
NEDD1-211ENST00000557454 HFEQ30201 348 aa7.9□□□□□ -1.14
NEDD1-211ENST00000557454 HP1BP3Q5SSJ5 553 aaPredicted RBP7.9□□□□□ -1.14
NEDD1-211ENST00000557454 RNASEH2BQ5TBB1 312 aaKnown RBP7.9□□□□□ -1.14
NEDD1-211ENST00000557454 GTF2H2CQ6P1K8 395 aa7.9□□□□□ -1.14
NEDD1-211ENST00000557454 PGBD2Q6P3X8 592 aa7.9□□□□□ -1.14
NEDD1-211ENST00000557454 TMEM154Q6P9G4 183 aa7.9□□□□□ -1.14
NEDD1-211ENST00000557454 PAQR6Q6TCH4 344 aa7.9□□□□□ -1.14
NEDD1-211ENST00000557454 LINGO2Q7L985 606 aa7.9□□□□□ -1.14
NEDD1-211ENST00000557454 MTERF4Q7Z6M4 381 aaKnown RBP7.9□□□□□ -1.14
NEDD1-211ENST00000557454 MDP1Q86V88 176 aa7.9□□□□□ -1.14
NEDD1-211ENST00000557454 MMGT1Q8N4V1 131 aa7.9□□□□□ -1.14
NEDD1-211ENST00000557454 OR4S1Q8NGB4 309 aa7.9□□□□□ -1.14
NEDD1-211ENST00000557454 STAG3L4Q8TBR4 150 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms