RNA–Protein interactions for RNA: ENST00000557439.5

XRCC3-218, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 5

Gene XRCC3, Length 2,599 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-218ENST00000557439 HOXC4P09017 264 aaPredicted RBP16.25■□□□□ 0.19
XRCC3-218ENST00000557439 EPXP11678 715 aa16.25■□□□□ 0.19
XRCC3-218ENST00000557439 PTHLHP12272 177 aa16.25■□□□□ 0.19
XRCC3-218ENST00000557439 RAB38P57729 211 aa16.25■□□□□ 0.19
XRCC3-218ENST00000557439 STX4Q12846 297 aa16.25■□□□□ 0.19
XRCC3-218ENST00000557439 CDK5R1Q15078 307 aa16.25■□□□□ 0.19
XRCC3-218ENST00000557439 ARHGAP11AQ6P4F7 1023 aa16.25■□□□□ 0.19
XRCC3-218ENST00000557439 SLC35F2Q8IXU6 374 aa16.25■□□□□ 0.19
XRCC3-218ENST00000557439 LGALS14Q8TCE9 139 aa16.25■□□□□ 0.19
XRCC3-218ENST00000557439 CLIP3Q96DZ5 547 aa16.25■□□□□ 0.19
XRCC3-218ENST00000557439 TWSG1Q9GZX9 223 aa16.25■□□□□ 0.19
XRCC3-218ENST00000557439 SLC23A1Q9UHI7 598 aa16.25■□□□□ 0.19
XRCC3-218ENST00000557439 ARID1BQ8NFD5 2236 aaPredicted RBP16.25■□□□□ 0.19
XRCC3-218ENST00000557439 ALX3O95076 343 aa16.25■□□□□ 0.19
XRCC3-218ENST00000557439 IFNGP01579 166 aa16.25■□□□□ 0.19
XRCC3-218ENST00000557439 SLC35E2P0CK97 266 aa16.25■□□□□ 0.19
XRCC3-218ENST00000557439 TNK1Q13470 666 aa16.25■□□□□ 0.19
XRCC3-218ENST00000557439 ZCCHC12Q6PEW1 402 aa16.25■□□□□ 0.19
XRCC3-218ENST00000557439 TOMM5Q8N4H5 51 aa16.25■□□□□ 0.19
XRCC3-218ENST00000557439 OR51Q1Q8NH59 317 aa16.25■□□□□ 0.19
XRCC3-218ENST00000557439 MOSPD2Q8NHP6 518 aa16.25■□□□□ 0.19
XRCC3-218ENST00000557439 GRPEL2Q8TAA5 225 aa16.25■□□□□ 0.19
XRCC3-218ENST00000557439 DACT3Q96B18 629 aaPredicted RBP16.25■□□□□ 0.19
XRCC3-218ENST00000557439 CNN2Q99439 309 aaKnown RBP16.25■□□□□ 0.19
XRCC3-218ENST00000557439 IRF2BPLQ9H1B7 796 aa16.25■□□□□ 0.19
XRCC3-218ENST00000557439 MED28Q9H204 178 aa16.25■□□□□ 0.19
XRCC3-218ENST00000557439 FKRPQ9H9S5 495 aa16.25■□□□□ 0.19
XRCC3-218ENST00000557439 POT1Q9NUX5 634 aa16.25■□□□□ 0.19
XRCC3-218ENST00000557439 C2orf42Q9NWW7 574 aa16.25■□□□□ 0.19
XRCC3-218ENST00000557439 RPS6KB2Q9UBS0 482 aa16.25■□□□□ 0.19
XRCC3-218ENST00000557439 ENTPD2Q9Y5L3 495 aa16.25■□□□□ 0.19
XRCC3-218ENST00000557439 LRP4O75096 1905 aa16.24■□□□□ 0.19
XRCC3-218ENST00000557439 B4DGG1 531 aa16.24■□□□□ 0.19
XRCC3-218ENST00000557439 UBE2IP63279 158 aaKnown RBP16.24■□□□□ 0.19
XRCC3-218ENST00000557439 TIGD3Q6B0B8 471 aa16.24■□□□□ 0.19
XRCC3-218ENST00000557439 ZNF687Q8N1G0 1237 aa16.24■□□□□ 0.19
XRCC3-218ENST00000557439 ZNF655Q8N720 491 aaPredicted RBP16.24■□□□□ 0.19
XRCC3-218ENST00000557439 ZNF511Q8NB15 262 aa16.24■□□□□ 0.19
XRCC3-218ENST00000557439 KCTD12Q96CX2 325 aaKnown RBP16.24■□□□□ 0.19
XRCC3-218ENST00000557439 SMIM19Q96E16 107 aa16.24■□□□□ 0.19
XRCC3-218ENST00000557439 RBM18Q96H35 190 aaKnown RBP16.24■□□□□ 0.19
XRCC3-218ENST00000557439 HSPA12BQ96MM6 686 aa16.24■□□□□ 0.19
XRCC3-218ENST00000557439 VSTM2LQ96N03 204 aa16.24■□□□□ 0.19
XRCC3-218ENST00000557439 C14orf105Q9NVL8 296 aa16.24■□□□□ 0.19
XRCC3-218ENST00000557439 NKIRAS2Q9NYR9 191 aa16.24■□□□□ 0.19
XRCC3-218ENST00000557439 ERVK-19Q9WJR5 959 aa16.24■□□□□ 0.19
XRCC3-218ENST00000557439 PIAS3Q9Y6X2 628 aa16.24■□□□□ 0.19
XRCC3-218ENST00000557439 SEC16AO15027 2179 aa16.24■□□□□ 0.19
XRCC3-218ENST00000557439 NDUFB2O95178 105 aa16.24■□□□□ 0.19
XRCC3-218ENST00000557439 TCRBP04435 133 aa16.24■□□□□ 0.19
XRCC3-218ENST00000557439 WNT1P04628 370 aa16.24■□□□□ 0.19
XRCC3-218ENST00000557439 TAS2R43P59537 309 aa16.24■□□□□ 0.19
XRCC3-218ENST00000557439 SIRPAP78324 504 aa16.24■□□□□ 0.19
XRCC3-218ENST00000557439 PYHIN1Q6K0P9 492 aa16.24■□□□□ 0.19
XRCC3-218ENST00000557439 TPRA1Q86W33 373 aa16.24■□□□□ 0.19
XRCC3-218ENST00000557439 ZNF433Q8N7K0 673 aaPredicted RBP16.24■□□□□ 0.19
XRCC3-218ENST00000557439 ZNF524Q96C55 264 aa16.24■□□□□ 0.19
XRCC3-218ENST00000557439 TRIM2Q9C040 744 aa16.24■□□□□ 0.19
XRCC3-218ENST00000557439 NIPAL2Q9H841 368 aa16.24■□□□□ 0.19
XRCC3-218ENST00000557439 NOX4Q9NPH5 578 aa16.24■□□□□ 0.19
XRCC3-218ENST00000557439 SLCO1C1Q9NYB5 712 aa16.24■□□□□ 0.19
XRCC3-218ENST00000557439 CLEC1BQ9P126 229 aa16.24■□□□□ 0.19
XRCC3-218ENST00000557439 TMA7Q9Y2S6 64 aaKnown RBP16.24■□□□□ 0.19
XRCC3-218ENST00000557439 C17orf51A8MQB3 221 aa16.23■□□□□ 0.19
XRCC3-218ENST00000557439 BLOC1S5-TXNDC5H3BN57 136 aa16.23■□□□□ 0.19
XRCC3-218ENST00000557439 PIN1P1O15428 100 aa16.23■□□□□ 0.19
XRCC3-218ENST00000557439 FLRT2O43155 660 aa16.23■□□□□ 0.19
XRCC3-218ENST00000557439 OIP5O43482 229 aa16.23■□□□□ 0.19
XRCC3-218ENST00000557439 FOXS1O43638 330 aa16.23■□□□□ 0.19
XRCC3-218ENST00000557439 NDUFB5O43674 189 aa16.23■□□□□ 0.19
XRCC3-218ENST00000557439 RPP14O95059 124 aaKnown RBP16.23■□□□□ 0.19
XRCC3-218ENST00000557439 AK1P00568 194 aa16.23■□□□□ 0.19
XRCC3-218ENST00000557439 CSTAP01040 98 aa16.23■□□□□ 0.19
XRCC3-218ENST00000557439 GABRG2P18507 467 aa16.23■□□□□ 0.19
XRCC3-218ENST00000557439 RPS27P42677 84 aaKnown RBP16.23■□□□□ 0.19
XRCC3-218ENST00000557439 NANOS3P60323 173 aaKnown RBP16.23■□□□□ 0.19
XRCC3-218ENST00000557439 HHEXQ03014 270 aa16.23■□□□□ 0.19
XRCC3-218ENST00000557439 ZNHIT3Q15649 155 aaPredicted RBP16.23■□□□□ 0.19
XRCC3-218ENST00000557439 OR11H4Q8NGC9 324 aa16.23■□□□□ 0.19
XRCC3-218ENST00000557439 ZNF671Q8TAW3 534 aa16.23■□□□□ 0.19
XRCC3-218ENST00000557439 SGTBQ96EQ0 304 aa16.23■□□□□ 0.19
XRCC3-218ENST00000557439 GFI1Q99684 422 aa16.23■□□□□ 0.19
XRCC3-218ENST00000557439 HAO2Q9NYQ3 351 aa16.23■□□□□ 0.19
XRCC3-218ENST00000557439 NCDNQ9UBB6 729 aa16.23■□□□□ 0.19
XRCC3-218ENST00000557439 SERTAD3Q9UJW9 196 aa16.23■□□□□ 0.19
XRCC3-218ENST00000557439 TEX13CA0A0J9YWL9 993 aa16.23■□□□□ 0.19
XRCC3-218ENST00000557439 ARHGEF9O43307 516 aa16.23■□□□□ 0.19
XRCC3-218ENST00000557439 CT45A8P0DMV1 189 aa16.23■□□□□ 0.19
XRCC3-218ENST00000557439 CT45A9P0DMV2 189 aa16.23■□□□□ 0.19
XRCC3-218ENST00000557439 AKT2P31751 481 aa16.23■□□□□ 0.19
XRCC3-218ENST00000557439 PPM1FP49593 454 aaPredicted RBP16.23■□□□□ 0.19
XRCC3-218ENST00000557439 CCR4P51679 360 aa16.23■□□□□ 0.19
XRCC3-218ENST00000557439 ACTC1P68032 377 aa16.23■□□□□ 0.19
XRCC3-218ENST00000557439 ACTA1P68133 377 aa16.23■□□□□ 0.19
XRCC3-218ENST00000557439 EIF2B5Q13144 721 aaKnown RBP16.23■□□□□ 0.19
XRCC3-218ENST00000557439 CT45A2Q5DJT8 189 aa16.23■□□□□ 0.19
XRCC3-218ENST00000557439 ULK3Q6PHR2 472 aa16.23■□□□□ 0.19
XRCC3-218ENST00000557439 LINC00114Q6XXX2 140 aa16.23■□□□□ 0.19
XRCC3-218ENST00000557439 LIX1LQ8IVB5 337 aa16.23■□□□□ 0.19
XRCC3-218ENST00000557439 NPEPL1Q8NDH3 523 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms