RNA–Protein interactions for RNA: ENST00000557433.5

SHMT2-231, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best)

Gene SHMT2, Length 1,904 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-231ENST00000557433 BMPERQ8N8U9 685 aa14.98□□□□□ -0.01
SHMT2-231ENST00000557433 OR52E2Q8NGJ4 325 aa14.98□□□□□ -0.01
SHMT2-231ENST00000557433 OR52I2Q8NH67 350 aa14.98□□□□□ -0.01
SHMT2-231ENST00000557433 RBM18Q96H35 190 aaKnown RBP14.98□□□□□ -0.01
SHMT2-231ENST00000557433 DDOQ99489 341 aa14.98□□□□□ -0.01
SHMT2-231ENST00000557433 SLITRK2Q9H156 845 aa14.98□□□□□ -0.01
SHMT2-231ENST00000557433 OR10A4Q9H209 315 aa14.98□□□□□ -0.01
SHMT2-231ENST00000557433 SYNPO2LQ9H987 977 aa14.98□□□□□ -0.01
SHMT2-231ENST00000557433 NOX3Q9HBY0 568 aa14.98□□□□□ -0.01
SHMT2-231ENST00000557433 ADAP2Q9NPF8 381 aa14.98□□□□□ -0.01
SHMT2-231ENST00000557433 PIPOXQ9P0Z9 390 aa14.98□□□□□ -0.01
SHMT2-231ENST00000557433 NCDNQ9UBB6 729 aa14.98□□□□□ -0.01
SHMT2-231ENST00000557433 DPP7Q9UHL4 492 aa14.98□□□□□ -0.01
SHMT2-231ENST00000557433 KCNE5Q9UJ90 142 aa14.98□□□□□ -0.01
SHMT2-231ENST00000557433 CA5BQ9Y2D0 317 aa14.98□□□□□ -0.01
SHMT2-231ENST00000557433 V9GY05 133 aa14.98□□□□□ -0.01
SHMT2-231ENST00000557433 NUMA1Q14980 2115 aa14.97□□□□□ -0.01
SHMT2-231ENST00000557433 A0A1B0GWA3 101 aa14.97□□□□□ -0.01
SHMT2-231ENST00000557433 HMSDA8MTL9 139 aa14.97□□□□□ -0.01
SHMT2-231ENST00000557433 PEX12O00623 359 aa14.97□□□□□ -0.01
SHMT2-231ENST00000557433 CTRB1P17538 263 aa14.97□□□□□ -0.01
SHMT2-231ENST00000557433 C5AR1P21730 350 aa14.97□□□□□ -0.01
SHMT2-231ENST00000557433 NFYAP23511 347 aaPredicted RBP14.97□□□□□ -0.01
SHMT2-231ENST00000557433 MAPK3P27361 379 aaPredicted RBP14.97□□□□□ -0.01
SHMT2-231ENST00000557433 CST6Q15828 149 aa14.97□□□□□ -0.01
SHMT2-231ENST00000557433 TRMT12Q53H54 448 aaKnown RBP14.97□□□□□ -0.01
SHMT2-231ENST00000557433 FCRLBQ6BAA4 426 aa14.97□□□□□ -0.01
SHMT2-231ENST00000557433 CTRB2Q6GPI1 263 aa14.97□□□□□ -0.01
SHMT2-231ENST00000557433 ESPNLQ6ZVH7 1005 aa14.97□□□□□ -0.01
SHMT2-231ENST00000557433 ABHD13Q7L211 337 aa14.97□□□□□ -0.01
SHMT2-231ENST00000557433 KCTD20Q7Z5Y7 419 aa14.97□□□□□ -0.01
SHMT2-231ENST00000557433 NAXDQ8IW45 347 aa14.97□□□□□ -0.01
SHMT2-231ENST00000557433 LCN9Q8WX39 176 aa14.97□□□□□ -0.01
SHMT2-231ENST00000557433 HAVCR1Q96D42 359 aa14.97□□□□□ -0.01
SHMT2-231ENST00000557433 RSPRY1Q96DX4 576 aa14.97□□□□□ -0.01
SHMT2-231ENST00000557433 ZMYND19Q96E35 227 aaPredicted RBP14.97□□□□□ -0.01
SHMT2-231ENST00000557433 SFXN2Q96NB2 322 aa14.97□□□□□ -0.01
SHMT2-231ENST00000557433 AIFM2Q9BRQ8 373 aa14.97□□□□□ -0.01
SHMT2-231ENST00000557433 NOX4Q9NPH5 578 aa14.97□□□□□ -0.01
SHMT2-231ENST00000557433 TAS2R10Q9NYW0 307 aa14.97□□□□□ -0.01
SHMT2-231ENST00000557433 GNG8Q9UK08 70 aa14.97□□□□□ -0.01
SHMT2-231ENST00000557433 FBXL4Q9UKA2 621 aa14.97□□□□□ -0.01
SHMT2-231ENST00000557433 PPIEQ9UNP9 301 aaKnown RBP14.97□□□□□ -0.01
SHMT2-231ENST00000557433 OR2M5A3KFT3 312 aa14.96□□□□□ -0.01
SHMT2-231ENST00000557433 MFSD2BA6NFX1 497 aa14.96□□□□□ -0.01
SHMT2-231ENST00000557433 ARPC1BO15143 372 aaKnown RBP14.96□□□□□ -0.01
SHMT2-231ENST00000557433 SCO1O75880 301 aa14.96□□□□□ -0.01
SHMT2-231ENST00000557433 NDUFB6O95139 128 aa14.96□□□□□ -0.01
SHMT2-231ENST00000557433 ACSM4P0C7M7 580 aa14.96□□□□□ -0.01
SHMT2-231ENST00000557433 PSMA6P60900 246 aaKnown RBP14.96□□□□□ -0.01
SHMT2-231ENST00000557433 PPP2CBP62714 309 aa14.96□□□□□ -0.01
SHMT2-231ENST00000557433 PPP2CAP67775 309 aa14.96□□□□□ -0.01
SHMT2-231ENST00000557433 SIM1P81133 766 aaPredicted RBP14.96□□□□□ -0.01
SHMT2-231ENST00000557433 STX4Q12846 297 aa14.96□□□□□ -0.01
SHMT2-231ENST00000557433 FHL1Q13642 323 aa14.96□□□□□ -0.01
SHMT2-231ENST00000557433 RUNX2Q13950 521 aa14.96□□□□□ -0.01
SHMT2-231ENST00000557433 KIR2DS3Q14952 304 aa14.96□□□□□ -0.01
SHMT2-231ENST00000557433 PDGFRLQ15198 375 aa14.96□□□□□ -0.01
SHMT2-231ENST00000557433 APOOLQ6UXV4 268 aa14.96□□□□□ -0.01
SHMT2-231ENST00000557433 DPY19L2P2Q6ZN68 376 aa14.96□□□□□ -0.01
SHMT2-231ENST00000557433 DNM1P46Q6ZS02 220 aa14.96□□□□□ -0.01
SHMT2-231ENST00000557433 OVCH2Q7RTZ1 564 aa14.96□□□□□ -0.01
SHMT2-231ENST00000557433 CAMKVQ8NCB2 501 aa14.96□□□□□ -0.01
SHMT2-231ENST00000557433 HOXB13Q92826 284 aaPredicted RBP14.96□□□□□ -0.01
SHMT2-231ENST00000557433 SLC25A38Q96DW6 304 aa14.96□□□□□ -0.01
SHMT2-231ENST00000557433 SCARF2Q96GP6 870 aaPredicted RBP14.96□□□□□ -0.01
SHMT2-231ENST00000557433 DPYSL5Q9BPU6 564 aa14.96□□□□□ -0.01
SHMT2-231ENST00000557433 RSPH9Q9H1X1 276 aaPredicted RBP14.96□□□□□ -0.01
SHMT2-231ENST00000557433 ING1Q9UK53 422 aaPredicted RBP14.96□□□□□ -0.01
SHMT2-231ENST00000557433 FOXJ3Q9UPW0 622 aa14.96□□□□□ -0.01
SHMT2-231ENST00000557433 ENTPD2Q9Y5L3 495 aa14.96□□□□□ -0.01
SHMT2-231ENST00000557433 ARPC4-TTLL3A0A0A6YYG9 625 aa14.96□□□□□ -0.02
SHMT2-231ENST00000557433 A0A1W2PPK0 400 aa14.96□□□□□ -0.02
SHMT2-231ENST00000557433 ARPC3O15145 178 aa14.96□□□□□ -0.02
SHMT2-231ENST00000557433 TNFSF14O43557 240 aa14.96□□□□□ -0.02
SHMT2-231ENST00000557433 GALR3O60755 368 aaPredicted RBP14.96□□□□□ -0.02
SHMT2-231ENST00000557433 PPM1BO75688 479 aa14.96□□□□□ -0.02
SHMT2-231ENST00000557433 TOXO94900 526 aa14.96□□□□□ -0.02
SHMT2-231ENST00000557433 ALDOBP05062 364 aa14.96□□□□□ -0.02
SHMT2-231ENST00000557433 GYPBP06028 91 aa14.96□□□□□ -0.02
SHMT2-231ENST00000557433 HOXD4P09016 255 aaPredicted RBP14.96□□□□□ -0.02
SHMT2-231ENST00000557433 PTH2RP49190 550 aa14.96□□□□□ -0.02
SHMT2-231ENST00000557433 RPS21P63220 83 aaKnown RBP14.96□□□□□ -0.02
SHMT2-231ENST00000557433 SGCGQ13326 291 aa14.96□□□□□ -0.02
SHMT2-231ENST00000557433 CAMK1Q14012 370 aa14.96□□□□□ -0.02
SHMT2-231ENST00000557433 TMEM69Q5SWH9 247 aa14.96□□□□□ -0.02
SHMT2-231ENST00000557433 SLC25A25Q6KCM7 469 aa14.96□□□□□ -0.02
SHMT2-231ENST00000557433 FAM122CQ6P4D5 195 aa14.96□□□□□ -0.02
SHMT2-231ENST00000557433 LRRN1Q6UXK5 716 aa14.96□□□□□ -0.02
SHMT2-231ENST00000557433 LINC00114Q6XXX2 140 aa14.96□□□□□ -0.02
SHMT2-231ENST00000557433 ZNF550Q7Z398 422 aa14.96□□□□□ -0.02
SHMT2-231ENST00000557433 THEM6Q8WUY1 208 aa14.96□□□□□ -0.02
SHMT2-231ENST00000557433 ELMOD3Q96FG2 381 aa14.96□□□□□ -0.02
SHMT2-231ENST00000557433 WBP1Q96G27 269 aa14.96□□□□□ -0.02
SHMT2-231ENST00000557433 DERL3Q96Q80 235 aa14.96□□□□□ -0.02
SHMT2-231ENST00000557433 ORAI3Q9BRQ5 295 aa14.96□□□□□ -0.02
SHMT2-231ENST00000557433 MKKSQ9NPJ1 570 aaPredicted RBP14.96□□□□□ -0.02
SHMT2-231ENST00000557433 SDHAF2Q9NX18 166 aa14.96□□□□□ -0.02
SHMT2-231ENST00000557433 FLVCR2Q9UPI3 526 aa14.96□□□□□ -0.02
SHMT2-231ENST00000557433 UBE2QL1A1L167 161 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms