RNA–Protein interactions for RNA: ENST00000556867.1

TDP1-216, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 748 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-216ENST00000556867 POLQO75417 2590 aa20.33■□□□□ 0.84
TDP1-216ENST00000556867 A0A1B0GWA3 101 aa20.32■□□□□ 0.84
TDP1-216ENST00000556867 FAM221AA4D161 298 aa20.32■□□□□ 0.84
TDP1-216ENST00000556867 SH3D21A4FU49 640 aa20.32■□□□□ 0.84
TDP1-216ENST00000556867 LIPT2A6NK58 231 aa20.32■□□□□ 0.84
TDP1-216ENST00000556867 ZNF716A6NP11 495 aa20.32■□□□□ 0.84
TDP1-216ENST00000556867 FAM220BPB1ANY3 271 aa20.32■□□□□ 0.84
TDP1-216ENST00000556867 C16orf97H3BN30 126 aa20.32■□□□□ 0.84
TDP1-216ENST00000556867 AIM2O14862 343 aa20.32■□□□□ 0.84
TDP1-216ENST00000556867 CD247P20963 164 aa20.32■□□□□ 0.84
TDP1-216ENST00000556867 CRYBA2P53672 197 aa20.32■□□□□ 0.84
TDP1-216ENST00000556867 SLC16A1P53985 500 aa20.32■□□□□ 0.84
TDP1-216ENST00000556867 KRTAP10-9P60411 292 aa20.32■□□□□ 0.84
TDP1-216ENST00000556867 NRF1Q16656 503 aa20.32■□□□□ 0.84
TDP1-216ENST00000556867 EXOC3L2Q2M3D2 409 aa20.32■□□□□ 0.84
TDP1-216ENST00000556867 DNAJA4Q8WW22 397 aaPredicted RBP20.32■□□□□ 0.84
TDP1-216ENST00000556867 ARHGDIGQ99819 225 aa20.32■□□□□ 0.84
TDP1-216ENST00000556867 WFDC6Q9BQY6 131 aa20.32■□□□□ 0.84
TDP1-216ENST00000556867 FANCFQ9NPI8 374 aa20.32■□□□□ 0.84
TDP1-216ENST00000556867 EMC3Q9P0I2 261 aa20.32■□□□□ 0.84
TDP1-216ENST00000556867 NDRG3Q9UGV2 375 aa20.32■□□□□ 0.84
TDP1-216ENST00000556867 AP3M1Q9Y2T2 418 aa20.32■□□□□ 0.84
TDP1-216ENST00000556867 ELOA3DA6NLF2 546 aaPredicted RBP20.31■□□□□ 0.84
TDP1-216ENST00000556867 A6NNC1 897 aa20.31■□□□□ 0.84
TDP1-216ENST00000556867 ZNF814B7Z6K7 855 aa20.31■□□□□ 0.84
TDP1-216ENST00000556867 CTAG2O75638 210 aa20.31■□□□□ 0.84
TDP1-216ENST00000556867 GPIP06744 558 aa20.31■□□□□ 0.84
TDP1-216ENST00000556867 FPR1P21462 350 aa20.31■□□□□ 0.84
TDP1-216ENST00000556867 PRDX6P30041 224 aa20.31■□□□□ 0.84
TDP1-216ENST00000556867 ELOA3BQ3SY89 546 aa20.31■□□□□ 0.84
TDP1-216ENST00000556867 C1orf140Q5VVS0 124 aa20.31■□□□□ 0.84
TDP1-216ENST00000556867 FAM91A1Q658Y4 838 aa20.31■□□□□ 0.84
TDP1-216ENST00000556867 PAQR6Q6TCH4 344 aa20.31■□□□□ 0.84
TDP1-216ENST00000556867 HACD2Q6Y1H2 254 aa20.31■□□□□ 0.84
TDP1-216ENST00000556867 PIGWQ7Z7B1 504 aa20.31■□□□□ 0.84
TDP1-216ENST00000556867 RANBP3LQ86VV4 465 aaPredicted RBP20.31■□□□□ 0.84
TDP1-216ENST00000556867 ELOA3Q8NG57 546 aa20.31■□□□□ 0.84
TDP1-216ENST00000556867 RASSF5Q8WWW0 418 aa20.31■□□□□ 0.84
TDP1-216ENST00000556867 CMTM5Q96DZ9 223 aa20.31■□□□□ 0.84
TDP1-216ENST00000556867 NAA11Q9BSU3 229 aaPredicted RBP20.31■□□□□ 0.84
TDP1-216ENST00000556867 EFCAB1Q9HAE3 211 aa20.31■□□□□ 0.84
TDP1-216ENST00000556867 USP22Q9UPT9 525 aa20.31■□□□□ 0.84
TDP1-216ENST00000556867 SPG11Q96JI7 2443 aa20.31■□□□□ 0.84
TDP1-216ENST00000556867 CCT8L1PA6NM43 557 aa20.3■□□□□ 0.84
TDP1-216ENST00000556867 M0R3H8 397 aa20.3■□□□□ 0.84
TDP1-216ENST00000556867 TPST2O60704 377 aa20.3■□□□□ 0.84
TDP1-216ENST00000556867 FMO6PO60774 539 aa20.3■□□□□ 0.84
TDP1-216ENST00000556867 RAMP1O60894 148 aa20.3■□□□□ 0.84
TDP1-216ENST00000556867 GOSR1O95249 250 aa20.3■□□□□ 0.84
TDP1-216ENST00000556867 PNMTP11086 282 aa20.3■□□□□ 0.84
TDP1-216ENST00000556867 CEACAM7Q14002 265 aa20.3■□□□□ 0.84
TDP1-216ENST00000556867 C8orf82Q6P1X6 216 aaPredicted RBP20.3■□□□□ 0.84
TDP1-216ENST00000556867 ULK3Q6PHR2 472 aa20.3■□□□□ 0.84
TDP1-216ENST00000556867 GALNT5Q7Z7M9 940 aa20.3■□□□□ 0.84
TDP1-216ENST00000556867 TMEM200AQ86VY9 491 aa20.3■□□□□ 0.84
TDP1-216ENST00000556867 CCDC103Q8IW40 242 aa20.3■□□□□ 0.84
TDP1-216ENST00000556867 OR2T12Q8NG77 320 aa20.3■□□□□ 0.84
TDP1-216ENST00000556867 SLC26A7Q8TE54 656 aa20.3■□□□□ 0.84
TDP1-216ENST00000556867 HOPXQ9BPY8 73 aaPredicted RBP20.3■□□□□ 0.84
TDP1-216ENST00000556867 PRR14Q9BWN1 585 aa20.3■□□□□ 0.84
TDP1-216ENST00000556867 TMEM27Q9HBJ8 222 aa20.3■□□□□ 0.84
TDP1-216ENST00000556867 CMTM6Q9NX76 183 aa20.3■□□□□ 0.84
TDP1-216ENST00000556867 PDZD2O15018 2839 aa20.29■□□□□ 0.84
TDP1-216ENST00000556867 A0A0B4J2E0 115 aa20.29■□□□□ 0.84
TDP1-216ENST00000556867 A0A1B0GX12 115 aa20.29■□□□□ 0.84
TDP1-216ENST00000556867 GPR171O14626 319 aa20.29■□□□□ 0.84
TDP1-216ENST00000556867 AHSA1O95433 338 aa20.29■□□□□ 0.84
TDP1-216ENST00000556867 OR3A2P47893 321 aa20.29■□□□□ 0.84
TDP1-216ENST00000556867 EGR4Q05215 589 aa20.29■□□□□ 0.84
TDP1-216ENST00000556867 OR1Q1Q15612 314 aa20.29■□□□□ 0.84
TDP1-216ENST00000556867 OR7A5Q15622 319 aa20.29■□□□□ 0.84
TDP1-216ENST00000556867 ALG10BQ5I7T1 473 aa20.29■□□□□ 0.84
TDP1-216ENST00000556867 C5orf46Q6UWT4 87 aa20.29■□□□□ 0.84
TDP1-216ENST00000556867 STAC2Q6ZMT1 411 aa20.29■□□□□ 0.84
TDP1-216ENST00000556867 SLC15A3Q8IY34 581 aa20.29■□□□□ 0.84
TDP1-216ENST00000556867 GABRG1Q8N1C3 465 aa20.29■□□□□ 0.84
TDP1-216ENST00000556867 SLC47A1Q96FL8 570 aa20.29■□□□□ 0.84
TDP1-216ENST00000556867 TAPBPLQ9BX59 468 aa20.29■□□□□ 0.84
TDP1-216ENST00000556867 KLHL4Q9C0H6 718 aa20.29■□□□□ 0.84
TDP1-216ENST00000556867 ARL2BPQ9Y2Y0 163 aa20.29■□□□□ 0.84
TDP1-216ENST00000556867 CREBBPQ92793 2442 aa20.29■□□□□ 0.84
TDP1-216ENST00000556867 ANKRD17O75179 2603 aaKnown RBP20.28■□□□□ 0.84
TDP1-216ENST00000556867 FZD7O75084 574 aa20.28■□□□□ 0.84
TDP1-216ENST00000556867 PSMB1P20618 241 aaKnown RBP20.28■□□□□ 0.84
TDP1-216ENST00000556867 NUDT2P50583 147 aa20.28■□□□□ 0.84
TDP1-216ENST00000556867 NPTX1Q15818 432 aa20.28■□□□□ 0.84
TDP1-216ENST00000556867 OTUD3Q5T2D3 398 aaPredicted RBP20.28■□□□□ 0.84
TDP1-216ENST00000556867 SWT1Q5T5J6 900 aaKnown RBP20.28■□□□□ 0.84
TDP1-216ENST00000556867 MICU2Q8IYU8 434 aa20.28■□□□□ 0.84
TDP1-216ENST00000556867 OR6T1Q8NGN1 323 aa20.28■□□□□ 0.84
TDP1-216ENST00000556867 MFSD8Q8NHS3 518 aa20.28■□□□□ 0.84
TDP1-216ENST00000556867 SLC38A4Q969I6 547 aa20.28■□□□□ 0.84
TDP1-216ENST00000556867 ZNF775Q96BV0 537 aaPredicted RBP20.28■□□□□ 0.84
TDP1-216ENST00000556867 WFIKKN1Q96NZ8 548 aa20.28■□□□□ 0.84
TDP1-216ENST00000556867 MCHR1Q99705 422 aa20.28■□□□□ 0.84
TDP1-216ENST00000556867 PTDSS2Q9BVG9 487 aa20.28■□□□□ 0.84
TDP1-216ENST00000556867 RASSF1Q9NS23 344 aa20.28■□□□□ 0.84
TDP1-216ENST00000556867 SELENONQ9NZV5 590 aa20.28■□□□□ 0.84
TDP1-216ENST00000556867 IGKV1D-42A0A075B6H8 117 aa20.27■□□□□ 0.84
TDP1-216ENST00000556867 ELOVL7A1L3X0 281 aa20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms