RNA–Protein interactions for RNA: ENST00000556220.5

ATXN3-236, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-236ENST00000556220 SLC12A4Q9UP95 1085 aa5.92□□□□□ -1.46
ATXN3-236ENST00000556220 TNPO3Q9Y5L0 923 aaKnown RBP5.92□□□□□ -1.46
ATXN3-236ENST00000556220 IGKV3D-15A0A087WSY6 115 aa5.91□□□□□ -1.46
ATXN3-236ENST00000556220 TRAV20A0A0B4J274 112 aa5.91□□□□□ -1.46
ATXN3-236ENST00000556220 A0A1W2PPM1 405 aa5.91□□□□□ -1.46
ATXN3-236ENST00000556220 TCRBV9S1A1TA0A576 114 aa5.91□□□□□ -1.46
ATXN3-236ENST00000556220 TTC36A6NLP5 189 aa5.91□□□□□ -1.46
ATXN3-236ENST00000556220 LYNX1G3V0Z9 82 aa5.91□□□□□ -1.46
ATXN3-236ENST00000556220 PDLIM1O00151 329 aa5.91□□□□□ -1.46
ATXN3-236ENST00000556220 OR7A17O14581 309 aa5.91□□□□□ -1.46
ATXN3-236ENST00000556220 FZD7O75084 574 aa5.91□□□□□ -1.46
ATXN3-236ENST00000556220 KNG1P01042 644 aa5.91□□□□□ -1.46
ATXN3-236ENST00000556220 TFP02787 698 aa5.91□□□□□ -1.46
ATXN3-236ENST00000556220 ITGA5P08648 1049 aa5.91□□□□□ -1.46
ATXN3-236ENST00000556220 IL3P08700 152 aa5.91□□□□□ -1.46
ATXN3-236ENST00000556220 LYNX1P0DP58 116 aa5.91□□□□□ -1.46
ATXN3-236ENST00000556220 GAAP10253 952 aa5.91□□□□□ -1.46
ATXN3-236ENST00000556220 GFAPP14136 432 aa5.91□□□□□ -1.46
ATXN3-236ENST00000556220 FAHP16930 419 aa5.91□□□□□ -1.46
ATXN3-236ENST00000556220 PRTN3P24158 256 aa5.91□□□□□ -1.46
ATXN3-236ENST00000556220 GCH1P30793 250 aa5.91□□□□□ -1.46
ATXN3-236ENST00000556220 SLC7A1P30825 629 aa5.91□□□□□ -1.46
ATXN3-236ENST00000556220 ARL1P40616 181 aaPredicted RBP5.91□□□□□ -1.46
ATXN3-236ENST00000556220 PRIM2P49643 509 aa5.91□□□□□ -1.46
ATXN3-236ENST00000556220 CCNG1P51959 295 aa5.91□□□□□ -1.46
ATXN3-236ENST00000556220 ALDH18A1P54886 795 aaKnown RBP5.91□□□□□ -1.46
ATXN3-236ENST00000556220 FOXG1P55316 489 aaPredicted RBP5.91□□□□□ -1.46
ATXN3-236ENST00000556220 SLC25A3Q00325 362 aa5.91□□□□□ -1.46
ATXN3-236ENST00000556220 PDK3Q15120 406 aa5.91□□□□□ -1.46
ATXN3-236ENST00000556220 SGO1Q5FBB7 561 aa5.91□□□□□ -1.46
ATXN3-236ENST00000556220 C1QL2Q7Z5L3 287 aa5.91□□□□□ -1.46
ATXN3-236ENST00000556220 Q8N1X5 172 aa5.91□□□□□ -1.46
ATXN3-236ENST00000556220 ZCCHC24Q8N2G6 241 aaKnown RBP5.91□□□□□ -1.46
ATXN3-236ENST00000556220 OR2L13Q8N349 312 aa5.91□□□□□ -1.46
ATXN3-236ENST00000556220 C17orf78Q8N4C9 275 aa5.91□□□□□ -1.46
ATXN3-236ENST00000556220 BPIFB2Q8N4F0 458 aa5.91□□□□□ -1.46
ATXN3-236ENST00000556220 C1orf52Q8N6N3 182 aaKnown RBP5.91□□□□□ -1.46
ATXN3-236ENST00000556220 FBXO36Q8NEA4 188 aa5.91□□□□□ -1.46
ATXN3-236ENST00000556220 CLDND2Q8NHS1 167 aa5.91□□□□□ -1.46
ATXN3-236ENST00000556220 RHEBL1Q8TAI7 183 aa5.91□□□□□ -1.46
ATXN3-236ENST00000556220 NANPQ8TBE9 248 aa5.91□□□□□ -1.46
ATXN3-236ENST00000556220 APH1AQ96BI3 265 aa5.91□□□□□ -1.46
ATXN3-236ENST00000556220 AJUBAQ96IF1 538 aa5.91□□□□□ -1.46
ATXN3-236ENST00000556220 MRGPRX4Q96LA9 322 aa5.91□□□□□ -1.46
ATXN3-236ENST00000556220 WWC2-AS2Q96NR7 200 aa5.91□□□□□ -1.46
ATXN3-236ENST00000556220 DOK1Q99704 481 aa5.91□□□□□ -1.46
ATXN3-236ENST00000556220 RACGAP1Q9H0H5 632 aa5.91□□□□□ -1.46
ATXN3-236ENST00000556220 MEGF9Q9H1U4 602 aa5.91□□□□□ -1.46
ATXN3-236ENST00000556220 ELOVL6Q9H5J4 265 aa5.91□□□□□ -1.46
ATXN3-236ENST00000556220 SLC52A3Q9NQ40 469 aa5.91□□□□□ -1.46
ATXN3-236ENST00000556220 G6PC2Q9NQR9 355 aa5.91□□□□□ -1.46
ATXN3-236ENST00000556220 FARSBQ9NSD9 589 aaKnown RBP5.91□□□□□ -1.46
ATXN3-236ENST00000556220 ACSS1Q9NUB1 689 aaPredicted RBP5.91□□□□□ -1.46
ATXN3-236ENST00000556220 NMRK1Q9NWW6 199 aa5.91□□□□□ -1.46
ATXN3-236ENST00000556220 MALT1Q9UDY8 824 aa5.91□□□□□ -1.46
ATXN3-236ENST00000556220 AMDHD2Q9Y303 409 aa5.91□□□□□ -1.46
ATXN3-236ENST00000556220 NOSIPQ9Y314 301 aaKnown RBP5.91□□□□□ -1.46
ATXN3-236ENST00000556220 UTP11Q9Y3A2 253 aaKnown RBP5.91□□□□□ -1.46
ATXN3-236ENST00000556220 PPIAL4AQ9Y536 164 aa5.91□□□□□ -1.46
ATXN3-236ENST00000556220 EPPK1P58107 5090 aaKnown RBP5.9□□□□□ -1.46
ATXN3-236ENST00000556220 A0A1W2PQD3 144 aa5.9□□□□□ -1.46
ATXN3-236ENST00000556220 CCDC189A1A4V9 331 aa5.9□□□□□ -1.46
ATXN3-236ENST00000556220 FAM159BA6NKW6 160 aa5.9□□□□□ -1.46
ATXN3-236ENST00000556220 MYO1GB0I1T2 1018 aa5.9□□□□□ -1.46
ATXN3-236ENST00000556220 hCG_2039718K7EN88 272 aa5.9□□□□□ -1.46
ATXN3-236ENST00000556220 PDYNP01213 254 aa5.9□□□□□ -1.46
ATXN3-236ENST00000556220 JUNP05412 331 aaKnown RBP5.9□□□□□ -1.46
ATXN3-236ENST00000556220 ABHD2P08910 425 aa5.9□□□□□ -1.46
ATXN3-236ENST00000556220 HPGDP15428 266 aa5.9□□□□□ -1.46
ATXN3-236ENST00000556220 CRABP2P29373 138 aa5.9□□□□□ -1.46
ATXN3-236ENST00000556220 ARRB2P32121 409 aa5.9□□□□□ -1.46
ATXN3-236ENST00000556220 MAP3K8P41279 467 aa5.9□□□□□ -1.46
ATXN3-236ENST00000556220 SLC1A3P43003 542 aa5.9□□□□□ -1.46
ATXN3-236ENST00000556220 NCBP2P52298 156 aaKnown RBP eCLIP5.9□□□□□ -1.465e-7■■■■□ 25.1
ATXN3-236ENST00000556220 ARL4CP56559 192 aa5.9□□□□□ -1.46
ATXN3-236ENST00000556220 PRPS1P60891 318 aa5.9□□□□□ -1.46
ATXN3-236ENST00000556220 IL1RL1Q01638 556 aa5.9□□□□□ -1.46
ATXN3-236ENST00000556220 TGFBR3Q03167 851 aa5.9□□□□□ -1.46
ATXN3-236ENST00000556220 SELENBP1Q13228 472 aa5.9□□□□□ -1.46
ATXN3-236ENST00000556220 HEPACAMQ14CZ8 416 aa5.9□□□□□ -1.46
ATXN3-236ENST00000556220 TMEM107Q6UX40 140 aa5.9□□□□□ -1.46
ATXN3-236ENST00000556220 LRIG3Q6UXM1 1119 aa5.9□□□□□ -1.46
ATXN3-236ENST00000556220 RAPH1Q70E73 1250 aa5.9□□□□□ -1.46
ATXN3-236ENST00000556220 USP51Q70EK9 711 aa5.9□□□□□ -1.46
ATXN3-236ENST00000556220 SYT14Q8NB59 555 aa5.9□□□□□ -1.46
ATXN3-236ENST00000556220 C1orf162Q8NEQ5 155 aaPredicted RBP5.9□□□□□ -1.46
ATXN3-236ENST00000556220 OR52E4Q8NGH9 312 aa5.9□□□□□ -1.46
ATXN3-236ENST00000556220 SELENOMQ8WWX9 145 aa5.9□□□□□ -1.46
ATXN3-236ENST00000556220 PIK3R3Q92569 461 aa5.9□□□□□ -1.46
ATXN3-236ENST00000556220 HOXB13Q92826 284 aaPredicted RBP5.9□□□□□ -1.46
ATXN3-236ENST00000556220 LRRC58Q96CX6 371 aa5.9□□□□□ -1.46
ATXN3-236ENST00000556220 ELP4Q96EB1 424 aa5.9□□□□□ -1.46
ATXN3-236ENST00000556220 BBS4Q96RK4 519 aa5.9□□□□□ -1.46
ATXN3-236ENST00000556220 RBBP8Q99708 897 aa5.9□□□□□ -1.46
ATXN3-236ENST00000556220 CPNE1Q99829 537 aa5.9□□□□□ -1.46
ATXN3-236ENST00000556220 C1QTNF5Q9BXJ0 243 aa5.9□□□□□ -1.46
ATXN3-236ENST00000556220 BRF2Q9HAW0 419 aa5.9□□□□□ -1.46
ATXN3-236ENST00000556220 DDX18Q9NVP1 670 aaKnown RBP5.9□□□□□ -1.46
ATXN3-236ENST00000556220 TREM2Q9NZC2 230 aa5.9□□□□□ -1.46
ATXN3-236ENST00000556220 EMC3Q9P0I2 261 aa5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms