RNA–Protein interactions for RNA: ENST00000556013.2

PTCSC3-201, Transcript of papillary thyroid carcinoma susceptibility candidate 3, humanhuman

TSL 1 (best) BASIC

Gene PTCSC3, Length 571 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCSC3-201ENST00000556013 A8MVM7 634 aa6.84□□□□□ -1.31
PTCSC3-201ENST00000556013 HNRNPCL2B2RXH8 293 aa6.84□□□□□ -1.31
PTCSC3-201ENST00000556013 HNRNPCL3B7ZW38 293 aa6.84□□□□□ -1.31
PTCSC3-201ENST00000556013 E7EQL1 145 aa6.84□□□□□ -1.31
PTCSC3-201ENST00000556013 RNF223E7ERA6 249 aa6.84□□□□□ -1.31
PTCSC3-201ENST00000556013 H7C417 338 aa6.84□□□□□ -1.31
PTCSC3-201ENST00000556013 SDHDO14521 159 aa6.84□□□□□ -1.31
PTCSC3-201ENST00000556013 RFXANKO14593 260 aa6.84□□□□□ -1.31
PTCSC3-201ENST00000556013 HNRNPCL1O60812 293 aaKnown RBP6.84□□□□□ -1.31
PTCSC3-201ENST00000556013 RAMP1O60894 148 aa6.84□□□□□ -1.31
PTCSC3-201ENST00000556013 ADAM11O75078 769 aa6.84□□□□□ -1.31
PTCSC3-201ENST00000556013 SNNO75324 88 aaPredicted RBP6.84□□□□□ -1.31
PTCSC3-201ENST00000556013 RAD51DO75771 328 aa6.84□□□□□ -1.31
PTCSC3-201ENST00000556013 WNT11O96014 354 aa6.84□□□□□ -1.31
PTCSC3-201ENST00000556013 IFNA2P01563 188 aa6.84□□□□□ -1.31
PTCSC3-201ENST00000556013 IGHV4-39P01824 125 aa6.84□□□□□ -1.31
PTCSC3-201ENST00000556013 CHRM4P08173 479 aa6.84□□□□□ -1.31
PTCSC3-201ENST00000556013 CSF3P09919 207 aa6.84□□□□□ -1.31
PTCSC3-201ENST00000556013 ALDOCP09972 364 aaKnown RBP6.84□□□□□ -1.31
PTCSC3-201ENST00000556013 TFPTP0C1Z6 253 aa6.84□□□□□ -1.31
PTCSC3-201ENST00000556013 HNRNPCL4P0DMR1 293 aa6.84□□□□□ -1.31
PTCSC3-201ENST00000556013 NR2F1P10589 423 aa6.84□□□□□ -1.31
PTCSC3-201ENST00000556013 IMPDH2P12268 514 aa6.84□□□□□ -1.31
PTCSC3-201ENST00000556013 IDO1P14902 403 aa6.84□□□□□ -1.31
PTCSC3-201ENST00000556013 SLC25A16P16260 332 aa6.84□□□□□ -1.31
PTCSC3-201ENST00000556013 BGNP21810 368 aa6.84□□□□□ -1.31
PTCSC3-201ENST00000556013 CXCR1P25024 350 aa6.84□□□□□ -1.31
PTCSC3-201ENST00000556013 EDNRAP25101 427 aa6.84□□□□□ -1.31
PTCSC3-201ENST00000556013 TACR3P29371 465 aa6.84□□□□□ -1.31
PTCSC3-201ENST00000556013 IL12AP29459 219 aa6.84□□□□□ -1.31
PTCSC3-201ENST00000556013 THBS2P35442 1172 aa6.84□□□□□ -1.31
PTCSC3-201ENST00000556013 ACVR1BP36896 505 aa6.84□□□□□ -1.31
PTCSC3-201ENST00000556013 CDKN1AP38936 164 aa6.84□□□□□ -1.31
PTCSC3-201ENST00000556013 ACAA2P42765 397 aaKnown RBP6.84□□□□□ -1.31
PTCSC3-201ENST00000556013 RNF144AP50876 292 aaPredicted RBP6.84□□□□□ -1.31
PTCSC3-201ENST00000556013 CRISP3P54108 245 aa6.84□□□□□ -1.31
PTCSC3-201ENST00000556013 CDH11P55287 796 aa6.84□□□□□ -1.31
PTCSC3-201ENST00000556013 PRPS1P60891 318 aa6.84□□□□□ -1.31
PTCSC3-201ENST00000556013 COPZ1P61923 177 aa6.84□□□□□ -1.31
PTCSC3-201ENST00000556013 PLAURQ03405 335 aa6.84□□□□□ -1.31
PTCSC3-201ENST00000556013 CHRNB3Q05901 458 aa6.84□□□□□ -1.31
PTCSC3-201ENST00000556013 KRTAP1-1Q07627 177 aa6.84□□□□□ -1.31
PTCSC3-201ENST00000556013 LOXL1Q08397 574 aaPredicted RBP6.84□□□□□ -1.31
PTCSC3-201ENST00000556013 FAPQ12884 760 aa6.84□□□□□ -1.31
PTCSC3-201ENST00000556013 LARS2Q15031 903 aaKnown RBP6.84□□□□□ -1.31
PTCSC3-201ENST00000556013 SYPL1Q16563 259 aa6.84□□□□□ -1.31
PTCSC3-201ENST00000556013 PDCD4Q53EL6 469 aaKnown RBP6.84□□□□□ -1.31
PTCSC3-201ENST00000556013 CEP85LQ5SZL2 805 aa6.84□□□□□ -1.31
PTCSC3-201ENST00000556013 HHATQ5VTY9 493 aa6.84□□□□□ -1.31
PTCSC3-201ENST00000556013 PRAMEF8Q5VWM4 474 aa6.84□□□□□ -1.31
PTCSC3-201ENST00000556013 PRAMEF7Q5VXH5 474 aa6.84□□□□□ -1.31
PTCSC3-201ENST00000556013 WBP2NLQ6ICG8 309 aa6.84□□□□□ -1.31
PTCSC3-201ENST00000556013 C11orf71Q6IPW1 123 aa6.84□□□□□ -1.31
PTCSC3-201ENST00000556013 SLC22A25Q6T423 547 aa6.84□□□□□ -1.31
PTCSC3-201ENST00000556013 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.84□□□□□ -1.31
PTCSC3-201ENST00000556013 CCDC103Q8IW40 242 aa6.84□□□□□ -1.31
PTCSC3-201ENST00000556013 MUC15Q8N387 334 aa6.84□□□□□ -1.31
PTCSC3-201ENST00000556013 FAM169BQ8N8A8 192 aa6.84□□□□□ -1.31
PTCSC3-201ENST00000556013 ANKFN1Q8N957 763 aa6.84□□□□□ -1.31
PTCSC3-201ENST00000556013 WDR31Q8NA23 367 aa6.84□□□□□ -1.31
PTCSC3-201ENST00000556013 MAGEE2Q8TD90 523 aaPredicted RBP6.84□□□□□ -1.31
PTCSC3-201ENST00000556013 STK35Q8TDR2 534 aa6.84□□□□□ -1.31
PTCSC3-201ENST00000556013 WDR60Q8WVS4 1066 aa6.84□□□□□ -1.31
PTCSC3-201ENST00000556013 PROX1Q92786 737 aa6.84□□□□□ -1.31
PTCSC3-201ENST00000556013 NEUROG1Q92886 237 aa6.84□□□□□ -1.31
PTCSC3-201ENST00000556013 TEX37Q96LM6 180 aa6.84□□□□□ -1.31
PTCSC3-201ENST00000556013 RMND5AQ9H871 391 aa6.84□□□□□ -1.31
PTCSC3-201ENST00000556013 C12orf10Q9HB07 376 aa6.84□□□□□ -1.31
PTCSC3-201ENST00000556013 BCL2L10Q9HD36 194 aa6.84□□□□□ -1.31
PTCSC3-201ENST00000556013 SLC17A5Q9NRA2 495 aa6.84□□□□□ -1.31
PTCSC3-201ENST00000556013 TMEM160Q9NX00 188 aa6.84□□□□□ -1.31
PTCSC3-201ENST00000556013 NPAP1Q9NZP6 1156 aa6.84□□□□□ -1.31
PTCSC3-201ENST00000556013 P2RX2Q9UBL9 471 aa6.84□□□□□ -1.31
PTCSC3-201ENST00000556013 PMF1-BGLAPU3KQ54 211 aa6.84□□□□□ -1.31
PTCSC3-201ENST00000556013 HEATR1Q9H583 2144 aaKnown RBP6.83□□□□□ -1.32
PTCSC3-201ENST00000556013 ZANQ9Y493 2812 aa6.83□□□□□ -1.32
PTCSC3-201ENST00000556013 DSPPQ9NZW4 1301 aa6.83□□□□□ -1.32
PTCSC3-201ENST00000556013 RTTNQ86VV8 2226 aa6.83□□□□□ -1.32
PTCSC3-201ENST00000556013 LOC102725191A0A1B0GVB3 256 aa6.83□□□□□ -1.32
PTCSC3-201ENST00000556013 TMEM72A0PK05 275 aa6.83□□□□□ -1.32
PTCSC3-201ENST00000556013 TMEM247A6NEH6 219 aa6.83□□□□□ -1.32
PTCSC3-201ENST00000556013 LIPT2A6NK58 231 aa6.83□□□□□ -1.32
PTCSC3-201ENST00000556013 AQP7P3A6NL99 342 aa6.83□□□□□ -1.32
PTCSC3-201ENST00000556013 CLDN24A6NM45 220 aa6.83□□□□□ -1.32
PTCSC3-201ENST00000556013 KLF11O14901 512 aa6.83□□□□□ -1.32
PTCSC3-201ENST00000556013 OR2T1O43869 369 aa6.83□□□□□ -1.32
PTCSC3-201ENST00000556013 FZD7O75084 574 aa6.83□□□□□ -1.32
PTCSC3-201ENST00000556013 NPIPB7O75200 414 aa6.83□□□□□ -1.32
PTCSC3-201ENST00000556013 BCAS1O75363 584 aaPredicted RBP6.83□□□□□ -1.32
PTCSC3-201ENST00000556013 SLC22A3O75751 556 aa6.83□□□□□ -1.32
PTCSC3-201ENST00000556013 ITGA5P08648 1049 aa6.83□□□□□ -1.32
PTCSC3-201ENST00000556013 BMP2P12643 396 aa6.83□□□□□ -1.32
PTCSC3-201ENST00000556013 MRPL19P49406 292 aaKnown RBP6.83□□□□□ -1.32
PTCSC3-201ENST00000556013 FABP6P51161 128 aa6.83□□□□□ -1.32
PTCSC3-201ENST00000556013 MVDP53602 400 aa6.83□□□□□ -1.32
PTCSC3-201ENST00000556013 IRX1P78414 480 aaPredicted RBP6.83□□□□□ -1.32
PTCSC3-201ENST00000556013 MAPK11Q15759 364 aa6.83□□□□□ -1.32
PTCSC3-201ENST00000556013 LIN52Q52LA3 116 aa6.83□□□□□ -1.32
PTCSC3-201ENST00000556013 MRPL2Q5T653 305 aaKnown RBP6.83□□□□□ -1.32
PTCSC3-201ENST00000556013 TSPO2Q5TGU0 170 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms