RNA–Protein interactions for RNA: ENST00000555907.5

RAD51B-222, Transcript of RAD51 paralog B, human

TSL 5

Gene RAD51B, Length 615 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAD51B-222	ENST00000555907	ICA1L	Q8NDH6	482 aa		10.2	□□□□□ -0.78
RAD51B-222	ENST00000555907	FAM83F	Q8NEG4	500 aa	Predicted RBP	10.2	□□□□□ -0.78
RAD51B-222	ENST00000555907	ELOA3	Q8NG57	546 aa		10.2	□□□□□ -0.78
RAD51B-222	ENST00000555907	OR4K5	Q8NGD3	323 aa		10.2	□□□□□ -0.78
RAD51B-222	ENST00000555907	TMEM255B	Q8WV15	326 aa		10.2	□□□□□ -0.78
RAD51B-222	ENST00000555907	LIPH	Q8WWY8	451 aa		10.2	□□□□□ -0.78
RAD51B-222	ENST00000555907	DNAJC9	Q8WXX5	260 aa		10.2	□□□□□ -0.78
RAD51B-222	ENST00000555907	CSMD1	Q96PZ7	3565 aa		10.2	□□□□□ -0.78
RAD51B-222	ENST00000555907	SLX1A	Q9BQ83	275 aa		10.2	□□□□□ -0.78
RAD51B-222	ENST00000555907	DGCR6L	Q9BY27	220 aa		10.2	□□□□□ -0.78
RAD51B-222	ENST00000555907	KLHL4	Q9C0H6	718 aa		10.2	□□□□□ -0.78
RAD51B-222	ENST00000555907	COQ10B	Q9H8M1	238 aa		10.2	□□□□□ -0.78
RAD51B-222	ENST00000555907	USE1	Q9NZ43	259 aa		10.2	□□□□□ -0.78
RAD51B-222	ENST00000555907	PDP1	Q9P0J1	537 aa	Predicted RBP	10.2	□□□□□ -0.78
RAD51B-222	ENST00000555907	CHRNA9	Q9UGM1	479 aa		10.2	□□□□□ -0.78
RAD51B-222	ENST00000555907	DKKL1	Q9UK85	242 aa		10.2	□□□□□ -0.78
RAD51B-222	ENST00000555907	OAZ3	Q9UMX2	235 aa		10.2	□□□□□ -0.78
RAD51B-222	ENST00000555907	MGAT4B	Q9UQ53	548 aa		10.2	□□□□□ -0.78
RAD51B-222	ENST00000555907	VDAC3	Q9Y277	283 aa		10.2	□□□□□ -0.78
RAD51B-222	ENST00000555907	MED31	Q9Y3C7	131 aa		10.2	□□□□□ -0.78
RAD51B-222	ENST00000555907	SPIN1	Q9Y657	262 aa	Predicted RBP	10.2	□□□□□ -0.78
RAD51B-222	ENST00000555907		U3KQV3	271 aa		10.2	□□□□□ -0.78
RAD51B-222	ENST00000555907	GTF3C1	Q12789	2109 aa		10.19	□□□□□ -0.78
RAD51B-222	ENST00000555907	FBN2	P35556	2912 aa		10.19	□□□□□ -0.78
RAD51B-222	ENST00000555907	ACOT7	O00154	380 aa		10.19	□□□□□ -0.78
RAD51B-222	ENST00000555907	KLF4	O43474	513 aa		10.19	□□□□□ -0.78
RAD51B-222	ENST00000555907	GMFG	O60234	142 aa		10.19	□□□□□ -0.78
RAD51B-222	ENST00000555907	HCN1	O60741	890 aa		10.19	□□□□□ -0.78
RAD51B-222	ENST00000555907	FZD7	O75084	574 aa		10.19	□□□□□ -0.78
RAD51B-222	ENST00000555907	HPR	P00739	348 aa		10.19	□□□□□ -0.78
RAD51B-222	ENST00000555907	IGHG3	P01860	377 aa		10.19	□□□□□ -0.78
RAD51B-222	ENST00000555907	ZNF23	P17027	643 aa		10.19	□□□□□ -0.78
RAD51B-222	ENST00000555907	GDF1	P27539	372 aa		10.19	□□□□□ -0.78
RAD51B-222	ENST00000555907	OMP	P47874	163 aa		10.19	□□□□□ -0.78
RAD51B-222	ENST00000555907	GSS	P48637	474 aa		10.19	□□□□□ -0.78
RAD51B-222	ENST00000555907	PTDSS1	P48651	473 aa	Known RBP	10.19	□□□□□ -0.78
RAD51B-222	ENST00000555907	UGT2B15	P54855	530 aa		10.19	□□□□□ -0.78
RAD51B-222	ENST00000555907	GFRA1	P56159	465 aa		10.19	□□□□□ -0.78
RAD51B-222	ENST00000555907	RAC1	P63000	192 aa		10.19	□□□□□ -0.78
RAD51B-222	ENST00000555907	PPP2R2B	Q00005	443 aa		10.19	□□□□□ -0.78
RAD51B-222	ENST00000555907	FOXF1	Q12946	379 aa		10.19	□□□□□ -0.78
RAD51B-222	ENST00000555907	SELENBP1	Q13228	472 aa		10.19	□□□□□ -0.78
RAD51B-222	ENST00000555907	SNCB	Q16143	134 aa		10.19	□□□□□ -0.78
RAD51B-222	ENST00000555907	BCL2A1	Q16548	175 aa		10.19	□□□□□ -0.78
RAD51B-222	ENST00000555907	ZNF800	Q2TB10	664 aa	Predicted RBP eCLIP	10.19	□□□□□ -0.78
RAD51B-222	ENST00000555907	NHSL2	Q5HYW2	709 aa		10.19	□□□□□ -0.78
RAD51B-222	ENST00000555907	RNFT1	Q5M7Z0	435 aa		10.19	□□□□□ -0.78
RAD51B-222	ENST00000555907	ZNF324B	Q6AW86	544 aa	Predicted RBP	10.19	□□□□□ -0.78
RAD51B-222	ENST00000555907	KDM4D	Q6B0I6	523 aa		10.19	□□□□□ -0.78
RAD51B-222	ENST00000555907	ZER1	Q7Z7L7	766 aa		10.19	□□□□□ -0.78
RAD51B-222	ENST00000555907	OR10G2	Q8NGC3	310 aa		10.19	□□□□□ -0.78
RAD51B-222	ENST00000555907	PIGX	Q8TBF5	258 aa		10.19	□□□□□ -0.78
RAD51B-222	ENST00000555907	GNPDA2	Q8TDQ7	276 aa		10.19	□□□□□ -0.78
RAD51B-222	ENST00000555907	SLC25A43	Q8WUT9	341 aa	Predicted RBP	10.19	□□□□□ -0.78
RAD51B-222	ENST00000555907	NRG4	Q8WWG1	115 aa		10.19	□□□□□ -0.78
RAD51B-222	ENST00000555907	EME1	Q96AY2	570 aa		10.19	□□□□□ -0.78
RAD51B-222	ENST00000555907	SDCCAG3	Q96C92	435 aa		10.19	□□□□□ -0.78
RAD51B-222	ENST00000555907	NPAS1	Q99742	590 aa		10.19	□□□□□ -0.78
RAD51B-222	ENST00000555907	SLC29A1	Q99808	456 aa		10.19	□□□□□ -0.78
RAD51B-222	ENST00000555907	CIB1	Q99828	191 aa		10.19	□□□□□ -0.78
RAD51B-222	ENST00000555907	RBM4B	Q9BQ04	359 aa	Known RBP	10.19	□□□□□ -0.78
RAD51B-222	ENST00000555907	RBM4	Q9BWF3	364 aa	Known RBP	10.19	□□□□□ -0.78
RAD51B-222	ENST00000555907	KRCC1	Q9NPI7	259 aa	Predicted RBP	10.19	□□□□□ -0.78
RAD51B-222	ENST00000555907	MEPE	Q9NQ76	525 aa	Predicted RBP	10.19	□□□□□ -0.78
RAD51B-222	ENST00000555907	TRAPPC4	Q9Y296	219 aa		10.19	□□□□□ -0.78
RAD51B-222	ENST00000555907	TMEM5	Q9Y2B1	443 aa		10.19	□□□□□ -0.78
RAD51B-222	ENST00000555907	AP4B1	Q9Y6B7	739 aa		10.19	□□□□□ -0.78
RAD51B-222	ENST00000555907	F8	P00451	2351 aa		10.18	□□□□□ -0.78
RAD51B-222	ENST00000555907	TRAV36DV7	A0A075B6V5	113 aa		10.18	□□□□□ -0.78
RAD51B-222	ENST00000555907		A0A1B0GVC2	190 aa		10.18	□□□□□ -0.78
RAD51B-222	ENST00000555907	TMEM72	A0PK05	275 aa		10.18	□□□□□ -0.78
RAD51B-222	ENST00000555907	SAC3D1	A6NKF1	404 aa		10.18	□□□□□ -0.78
RAD51B-222	ENST00000555907	PDLIM1	O00151	329 aa		10.18	□□□□□ -0.78
RAD51B-222	ENST00000555907	OR2T1	O43869	369 aa		10.18	□□□□□ -0.78
RAD51B-222	ENST00000555907	SUSD5	O60279	629 aa		10.18	□□□□□ -0.78
RAD51B-222	ENST00000555907	OR10H3	O60404	316 aa		10.18	□□□□□ -0.78
RAD51B-222	ENST00000555907	TRAPPC6A	O75865	159 aa		10.18	□□□□□ -0.78
RAD51B-222	ENST00000555907	ADA	P00813	363 aa		10.18	□□□□□ -0.78
RAD51B-222	ENST00000555907	GAST	P01350	101 aa		10.18	□□□□□ -0.78
RAD51B-222	ENST00000555907	CRYAB	P02511	175 aa	Known RBP	10.18	□□□□□ -0.78
RAD51B-222	ENST00000555907	ALPL	P05186	524 aa		10.18	□□□□□ -0.78
RAD51B-222	ENST00000555907	GSTM3	P21266	225 aa		10.18	□□□□□ -0.78
RAD51B-222	ENST00000555907	PRKACG	P22612	351 aa		10.18	□□□□□ -0.78
RAD51B-222	ENST00000555907	MAGEA5	P43359	124 aa		10.18	□□□□□ -0.78
RAD51B-222	ENST00000555907	DAP	P51397	102 aa		10.18	□□□□□ -0.78
RAD51B-222	ENST00000555907	ALDH3A2	P51648	485 aa		10.18	□□□□□ -0.78
RAD51B-222	ENST00000555907	TDGF1P3	P51864	188 aa		10.18	□□□□□ -0.78
RAD51B-222	ENST00000555907	PMP22	Q01453	160 aa		10.18	□□□□□ -0.78
RAD51B-222	ENST00000555907	DAG1	Q14118	895 aa		10.18	□□□□□ -0.78
RAD51B-222	ENST00000555907	LPCAT4	Q643R3	524 aa		10.18	□□□□□ -0.78
RAD51B-222	ENST00000555907	C3orf33	Q6P1S2	294 aa		10.18	□□□□□ -0.78
RAD51B-222	ENST00000555907	PGBD2	Q6P3X8	592 aa		10.18	□□□□□ -0.78
RAD51B-222	ENST00000555907	YRDC	Q86U90	279 aa	Known RBP	10.18	□□□□□ -0.78
RAD51B-222	ENST00000555907	SIAH3	Q8IW03	269 aa		10.18	□□□□□ -0.78
RAD51B-222	ENST00000555907	NRM	Q8IXM6	262 aa		10.18	□□□□□ -0.78
RAD51B-222	ENST00000555907	CDK20	Q8IZL9	346 aa		10.18	□□□□□ -0.78
RAD51B-222	ENST00000555907	HS3ST5	Q8IZT8	346 aa		10.18	□□□□□ -0.78
RAD51B-222	ENST00000555907	CBR4	Q8N4T8	237 aa		10.18	□□□□□ -0.78
RAD51B-222	ENST00000555907	OR14L1P	Q8NHC6	308 aa		10.18	□□□□□ -0.78
RAD51B-222	ENST00000555907	DDIT4L	Q96D03	193 aa		10.18	□□□□□ -0.78

Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms