RNA–Protein interactions for RNA: ENST00000555616.5

ACTN1-215, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 919 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-215ENST00000555616 SFXN3Q9BWM7 321 aa8.66□□□□□ -1.02
ACTN1-215ENST00000555616 RSPO3Q9BXY4 272 aaPredicted RBP8.66□□□□□ -1.02
ACTN1-215ENST00000555616 AMBRA1Q9C0C7 1298 aa8.66□□□□□ -1.02
ACTN1-215ENST00000555616 VCX3BQ9H321 246 aa8.66□□□□□ -1.02
ACTN1-215ENST00000555616 REEP1Q9H902 201 aa8.66□□□□□ -1.02
ACTN1-215ENST00000555616 TMEM27Q9HBJ8 222 aa8.66□□□□□ -1.02
ACTN1-215ENST00000555616 MCCC2Q9HCC0 563 aa8.66□□□□□ -1.02
ACTN1-215ENST00000555616 SELENONQ9NZV5 590 aa8.66□□□□□ -1.02
ACTN1-215ENST00000555616 JKAMPQ9P055 326 aa8.66□□□□□ -1.02
ACTN1-215ENST00000555616 RPS6KB2Q9UBS0 482 aa8.66□□□□□ -1.02
ACTN1-215ENST00000555616 CARD8Q9Y2G2 431 aa8.66□□□□□ -1.02
ACTN1-215ENST00000555616 CSMD2Q7Z408 3487 aa8.66□□□□□ -1.02
ACTN1-215ENST00000555616 CREBBPQ92793 2442 aa8.65□□□□□ -1.02
ACTN1-215ENST00000555616 FAAHO00519 579 aa8.65□□□□□ -1.02
ACTN1-215ENST00000555616 CASQ2O14958 399 aaPredicted RBP8.65□□□□□ -1.02
ACTN1-215ENST00000555616 RCBTB2O95199 551 aa8.65□□□□□ -1.02
ACTN1-215ENST00000555616 OR5F1O95221 314 aa8.65□□□□□ -1.02
ACTN1-215ENST00000555616 NUDT14O95848 222 aa8.65□□□□□ -1.02
ACTN1-215ENST00000555616 GKN3PP0CG01 181 aa8.65□□□□□ -1.02
ACTN1-215ENST00000555616 TMIGD3P0DMS9 266 aaPredicted RBP8.65□□□□□ -1.02
ACTN1-215ENST00000555616 THRBP10828 461 aa8.65□□□□□ -1.02
ACTN1-215ENST00000555616 PRG2P13727 222 aa8.65□□□□□ -1.02
ACTN1-215ENST00000555616 RYKP34925 604 aa8.65□□□□□ -1.02
ACTN1-215ENST00000555616 P2RX1P51575 399 aa8.65□□□□□ -1.02
ACTN1-215ENST00000555616 ARHGDIAP52565 204 aa8.65□□□□□ -1.02
ACTN1-215ENST00000555616 CLDN15P56746 228 aa8.65□□□□□ -1.02
ACTN1-215ENST00000555616 SPIBQ01892 262 aa8.65□□□□□ -1.02
ACTN1-215ENST00000555616 TLE4Q04727 773 aa8.65□□□□□ -1.02
ACTN1-215ENST00000555616 EPS8Q12929 822 aa8.65□□□□□ -1.02
ACTN1-215ENST00000555616 CBFBQ13951 182 aa8.65□□□□□ -1.02
ACTN1-215ENST00000555616 NPTX1Q15818 432 aa8.65□□□□□ -1.02
ACTN1-215ENST00000555616 NDUFAF6Q330K2 333 aa8.65□□□□□ -1.02
ACTN1-215ENST00000555616 ZNF613Q6PF04 617 aa8.65□□□□□ -1.02
ACTN1-215ENST00000555616 ARSKQ6UWY0 536 aa8.65□□□□□ -1.02
ACTN1-215ENST00000555616 RBM45Q8IUH3 476 aaKnown RBP8.65□□□□□ -1.02
ACTN1-215ENST00000555616 GTPBP8Q8N3Z3 284 aaPredicted RBP8.65□□□□□ -1.02
ACTN1-215ENST00000555616 MEIOBQ8N635 442 aa8.65□□□□□ -1.02
ACTN1-215ENST00000555616 LSMEM1Q8N8F7 131 aa8.65□□□□□ -1.02
ACTN1-215ENST00000555616 PIK3C3Q8NEB9 887 aa8.65□□□□□ -1.02
ACTN1-215ENST00000555616 OR4D11Q8NGI4 311 aa8.65□□□□□ -1.02
ACTN1-215ENST00000555616 ZNF563Q8TA94 476 aa8.65□□□□□ -1.02
ACTN1-215ENST00000555616 RNASE6Q93091 150 aaKnown RBP8.65□□□□□ -1.02
ACTN1-215ENST00000555616 ZBTB8AQ96BR9 441 aa8.65□□□□□ -1.02
ACTN1-215ENST00000555616 PKP2Q99959 881 aa8.65□□□□□ -1.02
ACTN1-215ENST00000555616 RIMS3Q9UJD0 308 aa8.65□□□□□ -1.02
ACTN1-215ENST00000555616 FOXD3Q9UJU5 478 aaPredicted RBP8.65□□□□□ -1.02
ACTN1-215ENST00000555616 ZNF337Q9Y3M9 751 aa8.65□□□□□ -1.02
ACTN1-215ENST00000555616 SAMHD1Q9Y3Z3 626 aaKnown RBP8.65□□□□□ -1.02
ACTN1-215ENST00000555616 ZNF175Q9Y473 711 aa8.65□□□□□ -1.02
ACTN1-215ENST00000555616 TESMINQ9Y4I5 508 aa8.65□□□□□ -1.02
ACTN1-215ENST00000555616 TRAPPC13A5PLN9 417 aa8.64□□□□□ -1.03
ACTN1-215ENST00000555616 SLC22A20A6NK97 555 aa8.64□□□□□ -1.03
ACTN1-215ENST00000555616 CPSF4LA6NMK7 179 aaKnown RBP8.64□□□□□ -1.03
ACTN1-215ENST00000555616 TNFRSF11BO00300 401 aa8.64□□□□□ -1.03
ACTN1-215ENST00000555616 OIP5O43482 229 aa8.64□□□□□ -1.03
ACTN1-215ENST00000555616 BCAS1O75363 584 aaPredicted RBP8.64□□□□□ -1.03
ACTN1-215ENST00000555616 DIRAS1O95057 198 aa8.64□□□□□ -1.03
ACTN1-215ENST00000555616 GADD45GO95257 159 aa8.64□□□□□ -1.03
ACTN1-215ENST00000555616 TGM6O95932 706 aa8.64□□□□□ -1.03
ACTN1-215ENST00000555616 CRHP06850 196 aa8.64□□□□□ -1.03
ACTN1-215ENST00000555616 H1F0P07305 194 aaKnown RBP8.64□□□□□ -1.03
ACTN1-215ENST00000555616 RRM2P31350 389 aa8.64□□□□□ -1.03
ACTN1-215ENST00000555616 ACAA2P42765 397 aaKnown RBP8.64□□□□□ -1.03
ACTN1-215ENST00000555616 YAP1P46937 504 aaKnown RBP8.64□□□□□ -1.03
ACTN1-215ENST00000555616 ZNF41P51814 821 aaPredicted RBP8.64□□□□□ -1.03
ACTN1-215ENST00000555616 CDH12P55289 794 aa8.64□□□□□ -1.03
ACTN1-215ENST00000555616 CLDN20P56880 219 aa8.64□□□□□ -1.03
ACTN1-215ENST00000555616 KRTAP10-9P60411 292 aa8.64□□□□□ -1.03
ACTN1-215ENST00000555616 HOXC5Q00444 222 aa8.64□□□□□ -1.03
ACTN1-215ENST00000555616 SORDQ00796 357 aa8.64□□□□□ -1.03
ACTN1-215ENST00000555616 PLAURQ03405 335 aa8.64□□□□□ -1.03
ACTN1-215ENST00000555616 ST3GAL3Q11203 375 aa8.64□□□□□ -1.03
ACTN1-215ENST00000555616 FOXF2Q12947 444 aa8.64□□□□□ -1.03
ACTN1-215ENST00000555616 PIN1Q13526 163 aaPredicted RBP8.64□□□□□ -1.03
ACTN1-215ENST00000555616 TRAM2Q15035 370 aa8.64□□□□□ -1.03
ACTN1-215ENST00000555616 PLPPR5Q32ZL2 321 aa8.64□□□□□ -1.03
ACTN1-215ENST00000555616 IQCCQ4KMZ1 466 aa8.64□□□□□ -1.03
ACTN1-215ENST00000555616 FGD3Q5JSP0 725 aa8.64□□□□□ -1.03
ACTN1-215ENST00000555616 ENTPD8Q5MY95 495 aa8.64□□□□□ -1.03
ACTN1-215ENST00000555616 SWT1Q5T5J6 900 aaKnown RBP8.64□□□□□ -1.03
ACTN1-215ENST00000555616 WBP2NLQ6ICG8 309 aa8.64□□□□□ -1.03
ACTN1-215ENST00000555616 CBLN3Q6UW01 205 aa8.64□□□□□ -1.03
ACTN1-215ENST00000555616 AMIGO2Q86SJ2 522 aa8.64□□□□□ -1.03
ACTN1-215ENST00000555616 GGNQ86UU5 652 aa8.64□□□□□ -1.03
ACTN1-215ENST00000555616 UBQLNLQ8IYU4 475 aa8.64□□□□□ -1.03
ACTN1-215ENST00000555616 OFCC1Q8IZS5 231 aa8.64□□□□□ -1.03
ACTN1-215ENST00000555616 LILRA2Q8N149 483 aa8.64□□□□□ -1.03
ACTN1-215ENST00000555616 CADM2Q8N3J6 435 aa8.64□□□□□ -1.03
ACTN1-215ENST00000555616 OR5M1Q8NGP8 315 aa8.64□□□□□ -1.03
ACTN1-215ENST00000555616 ADAMTS16Q8TE57 1224 aa8.64□□□□□ -1.03
ACTN1-215ENST00000555616 DNAJA4Q8WW22 397 aaPredicted RBP8.64□□□□□ -1.03
ACTN1-215ENST00000555616 NRG4Q8WWG1 115 aa8.64□□□□□ -1.03
ACTN1-215ENST00000555616 TMEM234Q8WY98 164 aa8.64□□□□□ -1.03
ACTN1-215ENST00000555616 ST8SIA1Q92185 356 aa8.64□□□□□ -1.03
ACTN1-215ENST00000555616 ARSGQ96EG1 525 aa8.64□□□□□ -1.03
ACTN1-215ENST00000555616 LRRC46Q96FV0 321 aa8.64□□□□□ -1.03
ACTN1-215ENST00000555616 EPYCQ99645 322 aa8.64□□□□□ -1.03
ACTN1-215ENST00000555616 WFDC6Q9BQY6 131 aa8.64□□□□□ -1.03
ACTN1-215ENST00000555616 ANKRD19PQ9H560 264 aa8.64□□□□□ -1.03
ACTN1-215ENST00000555616 NMNAT1Q9HAN9 279 aaPredicted RBP8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms