RNA–Protein interactions for RNA: ENST00000555550.1

SCFD1-216, Transcript of sec1 family domain containing 1, humanhuman

TSL 4

Gene SCFD1, Length 541 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-216ENST00000555550 CCDC184Q52MB2 194 aa1.99□□□□□ -2.09
SCFD1-216ENST00000555550 LRRC10Q5BKY1 277 aa1.99□□□□□ -2.09
SCFD1-216ENST00000555550 LY6G6FQ5SQ64 297 aa1.99□□□□□ -2.09
SCFD1-216ENST00000555550 RBM43Q6ZSC3 357 aaKnown RBP1.99□□□□□ -2.09
SCFD1-216ENST00000555550 KIAA1328Q86T90 577 aa1.99□□□□□ -2.09
SCFD1-216ENST00000555550 PAQR7Q86WK9 346 aa1.99□□□□□ -2.09
SCFD1-216ENST00000555550 PCP2Q8IVA1 136 aa1.99□□□□□ -2.09
SCFD1-216ENST00000555550 RDH10Q8IZV5 341 aa1.99□□□□□ -2.09
SCFD1-216ENST00000555550 ZNF713Q8N859 430 aaPredicted RBP1.99□□□□□ -2.09
SCFD1-216ENST00000555550 DENND6BQ8NEG7 585 aa1.99□□□□□ -2.09
SCFD1-216ENST00000555550 FGF11Q92914 225 aa1.99□□□□□ -2.09
SCFD1-216ENST00000555550 FCRL1Q96LA6 429 aa1.99□□□□□ -2.09
SCFD1-216ENST00000555550 C12orf66Q96MD2 445 aa1.99□□□□□ -2.09
SCFD1-216ENST00000555550 SLC35A5Q9BS91 424 aa1.99□□□□□ -2.09
SCFD1-216ENST00000555550 SPXQ9BT56 116 aa1.99□□□□□ -2.09
SCFD1-216ENST00000555550 FICDQ9BVA6 458 aa1.99□□□□□ -2.09
SCFD1-216ENST00000555550 RHBGQ9H310 441 aa1.99□□□□□ -2.09
SCFD1-216ENST00000555550 FOLH1BQ9HBA9 442 aa1.99□□□□□ -2.09
SCFD1-216ENST00000555550 INPP5EQ9NRR6 644 aa1.99□□□□□ -2.09
SCFD1-216ENST00000555550 B9D1Q9UPM9 204 aa1.99□□□□□ -2.09
SCFD1-216ENST00000555550 CHMP2BQ9UQN3 213 aa1.99□□□□□ -2.09
SCFD1-216ENST00000555550 HEBP2Q9Y5Z4 205 aa1.99□□□□□ -2.09
SCFD1-216ENST00000555550 PCM1Q15154 2024 aa1.99□□□□□ -2.09
SCFD1-216ENST00000555550 IGLV11-55A0A075B6I3 123 aa1.98□□□□□ -2.09
SCFD1-216ENST00000555550 IGKV1D-8A0A087WSZ0 117 aa1.98□□□□□ -2.09
SCFD1-216ENST00000555550 A0A0G2JLM5 398 aa1.98□□□□□ -2.09
SCFD1-216ENST00000555550 RNF103-CHMP3A0A140T963 221 aa1.98□□□□□ -2.09
SCFD1-216ENST00000555550 A0A1B0GUS0 222 aa1.98□□□□□ -2.09
SCFD1-216ENST00000555550 TRIM64A6NGJ6 449 aa1.98□□□□□ -2.09
SCFD1-216ENST00000555550 TRIM64BA6NI03 449 aa1.98□□□□□ -2.09
SCFD1-216ENST00000555550 B4GALT2O60909 372 aa1.98□□□□□ -2.09
SCFD1-216ENST00000555550 N4BP1O75113 896 aaKnown RBP1.98□□□□□ -2.09
SCFD1-216ENST00000555550 POU2F1P14859 743 aa1.98□□□□□ -2.09
SCFD1-216ENST00000555550 ABOP16442 354 aa1.98□□□□□ -2.09
SCFD1-216ENST00000555550 FUT1P19526 365 aa1.98□□□□□ -2.09
SCFD1-216ENST00000555550 TBXA2RP21731 343 aa1.98□□□□□ -2.09
SCFD1-216ENST00000555550 ADRA1AP35348 466 aa1.98□□□□□ -2.09
SCFD1-216ENST00000555550 CXCL5P42830 114 aa1.98□□□□□ -2.09
SCFD1-216ENST00000555550 CEBPEQ15744 281 aa1.98□□□□□ -2.09
SCFD1-216ENST00000555550 TMEM183BQ1AE95 376 aa1.98□□□□□ -2.09
SCFD1-216ENST00000555550 NANOGP8Q6NSW7 305 aa1.98□□□□□ -2.09
SCFD1-216ENST00000555550 ZSCAN25Q6NSZ9 544 aa1.98□□□□□ -2.09
SCFD1-216ENST00000555550 Q6ZN92 141 aa1.98□□□□□ -2.09
SCFD1-216ENST00000555550 CATSPER4Q7RTX7 472 aa1.98□□□□□ -2.09
SCFD1-216ENST00000555550 TMEM183AQ8IXX5 376 aa1.98□□□□□ -2.09
SCFD1-216ENST00000555550 ARRDC1Q8N5I2 433 aa1.98□□□□□ -2.09
SCFD1-216ENST00000555550 DHRSXQ8N5I4 330 aa1.98□□□□□ -2.09
SCFD1-216ENST00000555550 EXOSC8Q96B26 276 aaKnown RBP1.98□□□□□ -2.09
SCFD1-216ENST00000555550 ASB9Q96DX5 294 aa1.98□□□□□ -2.09
SCFD1-216ENST00000555550 ZNF641Q96N77 438 aaPredicted RBP1.98□□□□□ -2.09
SCFD1-216ENST00000555550 CCNL2Q96S94 520 aaPredicted RBP1.98□□□□□ -2.09
SCFD1-216ENST00000555550 SUDS3Q9H7L9 328 aaPredicted RBP1.98□□□□□ -2.09
SCFD1-216ENST00000555550 NGBQ9NPG2 151 aa1.98□□□□□ -2.09
SCFD1-216ENST00000555550 CCL28Q9NRJ3 127 aa1.98□□□□□ -2.09
SCFD1-216ENST00000555550 ZNF226Q9NYT6 803 aa1.98□□□□□ -2.09
SCFD1-216ENST00000555550 KNSTRNQ9Y448 316 aa1.98□□□□□ -2.09
SCFD1-216ENST00000555550 YTHDF2Q9Y5A9 579 aaKnown RBP1.98□□□□□ -2.09
SCFD1-216ENST00000555550 SLC25A15Q9Y619 301 aa1.98□□□□□ -2.09
SCFD1-216ENST00000555550 GSAPA4D1B5 854 aa1.97□□□□□ -2.09
SCFD1-216ENST00000555550 DCTN6O00399 190 aa1.97□□□□□ -2.09
SCFD1-216ENST00000555550 BET1O15155 118 aa1.97□□□□□ -2.09
SCFD1-216ENST00000555550 MBTPS2O43462 519 aa1.97□□□□□ -2.09
SCFD1-216ENST00000555550 TPST2O60704 377 aa1.97□□□□□ -2.09
SCFD1-216ENST00000555550 SUPT3HO75486 399 aa1.97□□□□□ -2.09
SCFD1-216ENST00000555550 LRATO95237 230 aa1.97□□□□□ -2.09
SCFD1-216ENST00000555550 TRIM16O95361 564 aa1.97□□□□□ -2.09
SCFD1-216ENST00000555550 MBD3O95983 291 aa1.97□□□□□ -2.09
SCFD1-216ENST00000555550 TDGF1P13385 188 aa1.97□□□□□ -2.09
SCFD1-216ENST00000555550 HPGDP15428 266 aa1.97□□□□□ -2.09
SCFD1-216ENST00000555550 POLR2EP19388 210 aaKnown RBP1.97□□□□□ -2.09
SCFD1-216ENST00000555550 TNNI3P19429 210 aa1.97□□□□□ -2.09
SCFD1-216ENST00000555550 RFC4P35249 363 aa1.97□□□□□ -2.09
SCFD1-216ENST00000555550 HPCAL1P37235 193 aa1.97□□□□□ -2.09
SCFD1-216ENST00000555550 ARRB1P49407 418 aaPredicted RBP1.97□□□□□ -2.09
SCFD1-216ENST00000555550 UBE2AP49459 152 aa1.97□□□□□ -2.09
SCFD1-216ENST00000555550 TDGF1P3P51864 188 aa1.97□□□□□ -2.09
SCFD1-216ENST00000555550 AP3M2P53677 418 aa1.97□□□□□ -2.09
SCFD1-216ENST00000555550 HSD17B7P56937 341 aa1.97□□□□□ -2.09
SCFD1-216ENST00000555550 SMARCB1Q12824 385 aa1.97□□□□□ -2.09
SCFD1-216ENST00000555550 UBE2SQ16763 222 aa1.97□□□□□ -2.09
SCFD1-216ENST00000555550 ZNF620Q6ZNG0 422 aa1.97□□□□□ -2.09
SCFD1-216ENST00000555550 PRSS41Q7RTY9 318 aa1.97□□□□□ -2.09
SCFD1-216ENST00000555550 HMGN2P46Q86SG4 172 aa1.97□□□□□ -2.09
SCFD1-216ENST00000555550 ACOT1Q86TX2 421 aa1.97□□□□□ -2.09
SCFD1-216ENST00000555550 OR10A7Q8NGE5 316 aa1.97□□□□□ -2.09
SCFD1-216ENST00000555550 MCOLN3Q8TDD5 553 aa1.97□□□□□ -2.09
SCFD1-216ENST00000555550 SEC22AQ96IW7 307 aa1.97□□□□□ -2.09
SCFD1-216ENST00000555550 NPAS2Q99743 824 aa1.97□□□□□ -2.09
SCFD1-216ENST00000555550 NDFIP1Q9BT67 221 aa1.97□□□□□ -2.09
SCFD1-216ENST00000555550 C20orf85Q9H1P6 137 aa1.97□□□□□ -2.09
SCFD1-216ENST00000555550 TBK1Q9UHD2 729 aa1.97□□□□□ -2.09
SCFD1-216ENST00000555550 PCYOX1Q9UHG3 505 aa1.97□□□□□ -2.09
SCFD1-216ENST00000555550 HMCN1Q96RW7 5635 aa1.96□□□□□ -2.1
SCFD1-216ENST00000555550 COLCA2A8K830 154 aa1.96□□□□□ -2.1
SCFD1-216ENST00000555550 TRDCB7Z8K6 153 aa1.96□□□□□ -2.1
SCFD1-216ENST00000555550 RS1O15537 224 aa1.96□□□□□ -2.1
SCFD1-216ENST00000555550 STAMBPO95630 424 aa1.96□□□□□ -2.1
SCFD1-216ENST00000555550 LGALS2P05162 132 aa1.96□□□□□ -2.1
SCFD1-216ENST00000555550 KLK3P07288 261 aaPredicted RBP1.96□□□□□ -2.1
SCFD1-216ENST00000555550 H2BFMP0C1H6 154 aa1.96□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms