RNA–Protein interactions for RNA: ENST00000553498.5

ATXN3-221, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 911 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-221ENST00000553498 ZFAND5O76080 213 aa6.67□□□□□ -1.34
ATXN3-221ENST00000553498 NADKO95544 446 aaPredicted RBP6.67□□□□□ -1.34
ATXN3-221ENST00000553498 TSPAN19P0C672 248 aa6.67□□□□□ -1.34
ATXN3-221ENST00000553498 HSMCR30P0CW71 290 aa6.67□□□□□ -1.34
ATXN3-221ENST00000553498 MYF5P13349 255 aa6.67□□□□□ -1.34
ATXN3-221ENST00000553498 ZNF12P17014 697 aa6.67□□□□□ -1.34
ATXN3-221ENST00000553498 GADD45AP24522 165 aa6.67□□□□□ -1.34
ATXN3-221ENST00000553498 ABCD3P28288 659 aa6.67□□□□□ -1.34
ATXN3-221ENST00000553498 GABRA5P31644 462 aa6.67□□□□□ -1.34
ATXN3-221ENST00000553498 CCKBRP32239 447 aa6.67□□□□□ -1.34
ATXN3-221ENST00000553498 CENPAP49450 140 aa6.67□□□□□ -1.34
ATXN3-221ENST00000553498 P2RX1P51575 399 aa6.67□□□□□ -1.34
ATXN3-221ENST00000553498 NR0B1P51843 470 aaKnown RBP6.67□□□□□ -1.34
ATXN3-221ENST00000553498 GAS1P54826 345 aa6.67□□□□□ -1.34
ATXN3-221ENST00000553498 FXYD6P3P58550 94 aa6.67□□□□□ -1.34
ATXN3-221ENST00000553498 VBP1P61758 197 aa6.67□□□□□ -1.34
ATXN3-221ENST00000553498 RNF4P78317 190 aa6.67□□□□□ -1.34
ATXN3-221ENST00000553498 C17orf67Q0P5P2 114 aa6.67□□□□□ -1.34
ATXN3-221ENST00000553498 TRAM1Q15629 374 aa6.67□□□□□ -1.34
ATXN3-221ENST00000553498 TSTQ16762 297 aaKnown RBP6.67□□□□□ -1.34
ATXN3-221ENST00000553498 ZNF404Q494X3 552 aa6.67□□□□□ -1.34
ATXN3-221ENST00000553498 PHF19Q5T6S3 580 aa6.67□□□□□ -1.34
ATXN3-221ENST00000553498 PWWP2BQ6NUJ5 590 aa6.67□□□□□ -1.34
ATXN3-221ENST00000553498 NIPAL3Q6P499 406 aa6.67□□□□□ -1.34
ATXN3-221ENST00000553498 TMPRSS9Q7Z410 1059 aa6.67□□□□□ -1.34
ATXN3-221ENST00000553498 CPEB2Q7Z5Q1 589 aaKnown RBP6.67□□□□□ -1.34
ATXN3-221ENST00000553498 ACBD7Q8N6N7 88 aa6.67□□□□□ -1.34
ATXN3-221ENST00000553498 TMEM105Q8N8V8 129 aa6.67□□□□□ -1.34
ATXN3-221ENST00000553498 POMGNT2Q8NAT1 580 aa6.67□□□□□ -1.34
ATXN3-221ENST00000553498 NFAM1Q8NET5 270 aaPredicted RBP6.67□□□□□ -1.34
ATXN3-221ENST00000553498 ZNF563Q8TA94 476 aa6.67□□□□□ -1.34
ATXN3-221ENST00000553498 TMEM234Q8WY98 164 aa6.67□□□□□ -1.34
ATXN3-221ENST00000553498 ST8SIA1Q92185 356 aa6.67□□□□□ -1.34
ATXN3-221ENST00000553498 UFD1Q92890 307 aa6.67□□□□□ -1.34
ATXN3-221ENST00000553498 NACC2Q96BF6 587 aa6.67□□□□□ -1.34
ATXN3-221ENST00000553498 OMA1Q96E52 524 aa6.67□□□□□ -1.34
ATXN3-221ENST00000553498 GAL3ST4Q96RP7 486 aa6.67□□□□□ -1.34
ATXN3-221ENST00000553498 ADOQ96SZ5 270 aa6.67□□□□□ -1.34
ATXN3-221ENST00000553498 KRTAP4-8Q9BYQ9 185 aa6.67□□□□□ -1.34
ATXN3-221ENST00000553498 FKRPQ9H9S5 495 aa6.67□□□□□ -1.34
ATXN3-221ENST00000553498 MCCC2Q9HCC0 563 aa6.67□□□□□ -1.34
ATXN3-221ENST00000553498 SDHAF3Q9NRP4 125 aa6.67□□□□□ -1.34
ATXN3-221ENST00000553498 ASB6Q9NWX5 421 aa6.67□□□□□ -1.34
ATXN3-221ENST00000553498 CRNNQ9UBG3 495 aaPredicted RBP6.67□□□□□ -1.34
ATXN3-221ENST00000553498 TNFRSF10DQ9UBN6 386 aa6.67□□□□□ -1.34
ATXN3-221ENST00000553498 GPN3Q9UHW5 284 aaPredicted RBP6.67□□□□□ -1.34
ATXN3-221ENST00000553498 ZNF229Q9UJW7 825 aa6.67□□□□□ -1.34
ATXN3-221ENST00000553498 SSR3Q9UNL2 185 aa6.67□□□□□ -1.34
ATXN3-221ENST00000553498 HIF3AQ9Y2N7 669 aa6.67□□□□□ -1.34
ATXN3-221ENST00000553498 GSTK1Q9Y2Q3 226 aa6.67□□□□□ -1.34
ATXN3-221ENST00000553498 RAXQ9Y2V3 346 aa6.67□□□□□ -1.34
ATXN3-221ENST00000553498 PEX16Q9Y5Y5 336 aa6.67□□□□□ -1.34
ATXN3-221ENST00000553498 A0A075B6Q4 140 aa6.66□□□□□ -1.34
ATXN3-221ENST00000553498 TRAV36DV7A0A075B6V5 113 aa6.66□□□□□ -1.34
ATXN3-221ENST00000553498 ARPC4-TTLL3A0A0A6YYG9 625 aa6.66□□□□□ -1.34
ATXN3-221ENST00000553498 A0A1W2PQ72 361 aa6.66□□□□□ -1.34
ATXN3-221ENST00000553498 OR2W5A6NFC9 320 aa6.66□□□□□ -1.34
ATXN3-221ENST00000553498 A8MUA0 341 aa6.66□□□□□ -1.34
ATXN3-221ENST00000553498 ZNF670-ZNF695F2Z2N8 137 aa6.66□□□□□ -1.34
ATXN3-221ENST00000553498 KPNA4O00629 521 aaPredicted RBP6.66□□□□□ -1.34
ATXN3-221ENST00000553498 SLC30A4O14863 429 aa6.66□□□□□ -1.34
ATXN3-221ENST00000553498 HCRTR2O43614 444 aa6.66□□□□□ -1.34
ATXN3-221ENST00000553498 OR2T1O43869 369 aa6.66□□□□□ -1.34
ATXN3-221ENST00000553498 ICOSLGO75144 302 aa6.66□□□□□ -1.34
ATXN3-221ENST00000553498 RFPL3O75679 317 aa6.66□□□□□ -1.34
ATXN3-221ENST00000553498 TIAF1O95411 115 aa6.66□□□□□ -1.34
ATXN3-221ENST00000553498 LDOC1O95751 146 aaPredicted RBP6.66□□□□□ -1.34
ATXN3-221ENST00000553498 TXNDC12O95881 172 aa6.66□□□□□ -1.34
ATXN3-221ENST00000553498 IL1AP01583 271 aa6.66□□□□□ -1.34
ATXN3-221ENST00000553498 HLA-DPB1P04440 258 aa6.66□□□□□ -1.34
ATXN3-221ENST00000553498 HIST1H2ABP04908 130 aa6.66□□□□□ -1.34
ATXN3-221ENST00000553498 CD1AP06126 327 aa6.66□□□□□ -1.34
ATXN3-221ENST00000553498 SP9P0CG40 484 aa6.66□□□□□ -1.34
ATXN3-221ENST00000553498 GP1BBP13224 206 aa6.66□□□□□ -1.34
ATXN3-221ENST00000553498 FUT1P19526 365 aa6.66□□□□□ -1.34
ATXN3-221ENST00000553498 CFL1P23528 166 aaKnown RBP6.66□□□□□ -1.34
ATXN3-221ENST00000553498 VAMP1P23763 118 aa6.66□□□□□ -1.34
ATXN3-221ENST00000553498 CXCR1P25024 350 aa6.66□□□□□ -1.34
ATXN3-221ENST00000553498 FKBP2P26885 142 aaKnown RBP6.66□□□□□ -1.34
ATXN3-221ENST00000553498 CD40LGP29965 261 aa6.66□□□□□ -1.34
ATXN3-221ENST00000553498 FGF9P31371 208 aaPredicted RBP6.66□□□□□ -1.34
ATXN3-221ENST00000553498 S100A5P33763 92 aa6.66□□□□□ -1.34
ATXN3-221ENST00000553498 EVI2BP34910 448 aa6.66□□□□□ -1.34
ATXN3-221ENST00000553498 MPLP40238 635 aa6.66□□□□□ -1.34
ATXN3-221ENST00000553498 ETV5P41161 510 aa6.66□□□□□ -1.34
ATXN3-221ENST00000553498 ETV1P50549 477 aa6.66□□□□□ -1.34
ATXN3-221ENST00000553498 BMXP51813 675 aa6.66□□□□□ -1.34
ATXN3-221ENST00000553498 POLR2HP52434 150 aaKnown RBP6.66□□□□□ -1.34
ATXN3-221ENST00000553498 NCS1P62166 190 aa6.66□□□□□ -1.34
ATXN3-221ENST00000553498 ACTA2P62736 377 aa6.66□□□□□ -1.34
ATXN3-221ENST00000553498 ACTG2P63267 376 aa6.66□□□□□ -1.34
ATXN3-221ENST00000553498 E2F1Q01094 437 aa6.66□□□□□ -1.34
ATXN3-221ENST00000553498 ZNF45Q02386 682 aa6.66□□□□□ -1.34
ATXN3-221ENST00000553498 HSF2Q03933 536 aa6.66□□□□□ -1.34
ATXN3-221ENST00000553498 MRPL28Q13084 256 aaKnown RBP6.66□□□□□ -1.34
ATXN3-221ENST00000553498 ITGADQ13349 1161 aa6.66□□□□□ -1.34
ATXN3-221ENST00000553498 GGTLC2Q14390 218 aa6.66□□□□□ -1.34
ATXN3-221ENST00000553498 MFSD13AQ14CX5 517 aa6.66□□□□□ -1.34
ATXN3-221ENST00000553498 CD226Q15762 336 aa6.66□□□□□ -1.34
ATXN3-221ENST00000553498 EXT1Q16394 746 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms