RNA–Protein interactions for RNA: ENST00000553488.5

ATXN3-219, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,065 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-219ENST00000553488 GNG11P61952 73 aa6.33□□□□□ -1.4
ATXN3-219ENST00000553488 POU6F2P78424 691 aaPredicted RBP6.33□□□□□ -1.4
ATXN3-219ENST00000553488 SKP2Q13309 424 aa6.33□□□□□ -1.4
ATXN3-219ENST00000553488 QPRTQ15274 297 aa6.33□□□□□ -1.4
ATXN3-219ENST00000553488 SPDYAQ5MJ70 313 aa6.33□□□□□ -1.4
ATXN3-219ENST00000553488 ZCCHC12Q6PEW1 402 aa6.33□□□□□ -1.4
ATXN3-219ENST00000553488 BHLHB9Q6PI77 547 aa6.33□□□□□ -1.4
ATXN3-219ENST00000553488 DEF8Q6ZN54 512 aa6.33□□□□□ -1.4
ATXN3-219ENST00000553488 SZRD1Q7Z422 152 aa6.33□□□□□ -1.4
ATXN3-219ENST00000553488 C17orf78Q8N4C9 275 aa6.33□□□□□ -1.4
ATXN3-219ENST00000553488 ZNF527Q8NB42 609 aa6.33□□□□□ -1.4
ATXN3-219ENST00000553488 C1orf162Q8NEQ5 155 aaPredicted RBP6.33□□□□□ -1.4
ATXN3-219ENST00000553488 OR52E4Q8NGH9 312 aa6.33□□□□□ -1.4
ATXN3-219ENST00000553488 ZFP28Q8NHY6 868 aa6.33□□□□□ -1.4
ATXN3-219ENST00000553488 APH1AQ96BI3 265 aa6.33□□□□□ -1.4
ATXN3-219ENST00000553488 FBXO17Q96EF6 278 aa6.33□□□□□ -1.4
ATXN3-219ENST00000553488 FAM120BQ96EK7 910 aaKnown RBP6.33□□□□□ -1.4
ATXN3-219ENST00000553488 OR5B2Q96R09 309 aa6.33□□□□□ -1.4
ATXN3-219ENST00000553488 STACQ99469 402 aa6.33□□□□□ -1.4
ATXN3-219ENST00000553488 BTBD2Q9BX70 525 aa6.33□□□□□ -1.4
ATXN3-219ENST00000553488 C1QTNF6Q9BXI9 259 aa6.33□□□□□ -1.4
ATXN3-219ENST00000553488 QRSL1Q9H0R6 528 aaKnown RBP6.33□□□□□ -1.4
ATXN3-219ENST00000553488 RAB17Q9H0T7 212 aa6.33□□□□□ -1.4
ATXN3-219ENST00000553488 C12orf65Q9H3J6 166 aaKnown RBP6.33□□□□□ -1.4
ATXN3-219ENST00000553488 SLC17A5Q9NRA2 495 aa6.33□□□□□ -1.4
ATXN3-219ENST00000553488 ACSS1Q9NUB1 689 aaPredicted RBP6.33□□□□□ -1.4
ATXN3-219ENST00000553488 GIN1Q9NXP7 522 aa6.33□□□□□ -1.4
ATXN3-219ENST00000553488 EMC3Q9P0I2 261 aa6.33□□□□□ -1.4
ATXN3-219ENST00000553488 TMEM216Q9P0N5 145 aa6.33□□□□□ -1.4
ATXN3-219ENST00000553488 ZNF180Q9UJW8 692 aa6.33□□□□□ -1.4
ATXN3-219ENST00000553488 UTP11Q9Y3A2 253 aaKnown RBP6.33□□□□□ -1.4
ATXN3-219ENST00000553488 ATP23Q9Y6H3 246 aa6.33□□□□□ -1.4
ATXN3-219ENST00000553488 KMT2CQ8NEZ4 4911 aaKnown RBP6.32□□□□□ -1.4
ATXN3-219ENST00000553488 WNK1Q9H4A3 2382 aa6.32□□□□□ -1.4
ATXN3-219ENST00000553488 A0A0A6YYJ9 748 aa6.32□□□□□ -1.4
ATXN3-219ENST00000553488 CENPVL1A0A0U1RR11 272 aa6.32□□□□□ -1.4
ATXN3-219ENST00000553488 CCDC151A5D8V7 595 aa6.32□□□□□ -1.4
ATXN3-219ENST00000553488 SLCO1B7G3V0H7 640 aa6.32□□□□□ -1.4
ATXN3-219ENST00000553488 SLU7O95391 586 aaKnown RBP6.32□□□□□ -1.4
ATXN3-219ENST00000553488 STAMBPO95630 424 aa6.32□□□□□ -1.4
ATXN3-219ENST00000553488 HMGN2P05204 90 aaKnown RBP6.32□□□□□ -1.4
ATXN3-219ENST00000553488 SDC1P18827 310 aa6.32□□□□□ -1.4
ATXN3-219ENST00000553488 EFNA1P20827 205 aaPredicted RBP6.32□□□□□ -1.4
ATXN3-219ENST00000553488 ATP5F1P24539 256 aaPredicted RBP6.32□□□□□ -1.4
ATXN3-219ENST00000553488 GIFP27352 417 aa6.32□□□□□ -1.4
ATXN3-219ENST00000553488 PHBP35232 272 aa6.32□□□□□ -1.4
ATXN3-219ENST00000553488 PRKAA2P54646 552 aa6.32□□□□□ -1.4
ATXN3-219ENST00000553488 CDH15P55291 814 aa6.32□□□□□ -1.4
ATXN3-219ENST00000553488 SNRPD2P62316 118 aaKnown RBP6.32□□□□□ -1.4
ATXN3-219ENST00000553488 LSAMPQ13449 338 aa6.32□□□□□ -1.4
ATXN3-219ENST00000553488 LASP1Q14847 261 aaKnown RBP6.32□□□□□ -1.4
ATXN3-219ENST00000553488 TIGD2Q4W5G0 525 aa6.32□□□□□ -1.4
ATXN3-219ENST00000553488 SYT14P1Q58G82 188 aa6.32□□□□□ -1.4
ATXN3-219ENST00000553488 DCST2Q5T1A1 773 aa6.32□□□□□ -1.4
ATXN3-219ENST00000553488 OR7E24Q6IFN5 339 aa6.32□□□□□ -1.4
ATXN3-219ENST00000553488 CDC73Q6P1J9 531 aa6.32□□□□□ -1.4
ATXN3-219ENST00000553488 TMPPEQ6ZT21 453 aa6.32□□□□□ -1.4
ATXN3-219ENST00000553488 UBE2J2Q8N2K1 259 aa6.32□□□□□ -1.4
ATXN3-219ENST00000553488 TOR1AIP2Q8NFQ8 470 aa6.32□□□□□ -1.4
ATXN3-219ENST00000553488 OR5W2Q8NH69 310 aa6.32□□□□□ -1.4
ATXN3-219ENST00000553488 SGMS2Q8NHU3 365 aa6.32□□□□□ -1.4
ATXN3-219ENST00000553488 ST8SIA1Q92185 356 aa6.32□□□□□ -1.4
ATXN3-219ENST00000553488 JADE3Q92613 823 aa6.32□□□□□ -1.4
ATXN3-219ENST00000553488 CCT7Q99832 543 aa6.32□□□□□ -1.4
ATXN3-219ENST00000553488 CDC42EP4Q9H3Q1 356 aaKnown RBP6.32□□□□□ -1.4
ATXN3-219ENST00000553488 PIGUQ9H490 435 aa6.32□□□□□ -1.4
ATXN3-219ENST00000553488 REEP4Q9H6H4 257 aa6.32□□□□□ -1.4
ATXN3-219ENST00000553488 FKRPQ9H9S5 495 aa6.32□□□□□ -1.4
ATXN3-219ENST00000553488 MID1IP1Q9NPA3 183 aa6.32□□□□□ -1.4
ATXN3-219ENST00000553488 ZCCHC3Q9NUD5 404 aaKnown RBP6.32□□□□□ -1.4
ATXN3-219ENST00000553488 ASB6Q9NWX5 421 aa6.32□□□□□ -1.4
ATXN3-219ENST00000553488 AMDHD2Q9Y303 409 aa6.32□□□□□ -1.4
ATXN3-219ENST00000553488 NOSIPQ9Y314 301 aaKnown RBP6.32□□□□□ -1.4
ATXN3-219ENST00000553488 DTNAQ9Y4J8 743 aa6.32□□□□□ -1.4
ATXN3-219ENST00000553488 PTGDR2Q9Y5Y4 395 aa6.32□□□□□ -1.4
ATXN3-219ENST00000553488 KCNE3Q9Y6H6 103 aa6.32□□□□□ -1.4
ATXN3-219ENST00000553488 TMEM89A2RUT3 159 aa6.31□□□□□ -1.4
ATXN3-219ENST00000553488 CCT8L1PA6NM43 557 aa6.31□□□□□ -1.4
ATXN3-219ENST00000553488 SULT2B1O00204 365 aa6.31□□□□□ -1.4
ATXN3-219ENST00000553488 ZNF264O43296 627 aa6.31□□□□□ -1.4
ATXN3-219ENST00000553488 TPD52L2O43399 206 aaKnown RBP6.31□□□□□ -1.4
ATXN3-219ENST00000553488 EIF4E2O60573 245 aaKnown RBP6.31□□□□□ -1.4
ATXN3-219ENST00000553488 PDE5AO76074 875 aa6.31□□□□□ -1.4
ATXN3-219ENST00000553488 URI1O94763 535 aaPredicted RBP6.31□□□□□ -1.4
ATXN3-219ENST00000553488 IGFBP1P08833 259 aaPredicted RBP6.31□□□□□ -1.4
ATXN3-219ENST00000553488 UBL4AP11441 157 aa6.31□□□□□ -1.4
ATXN3-219ENST00000553488 TAC1P20366 129 aa6.31□□□□□ -1.4
ATXN3-219ENST00000553488 GCAP28676 217 aa6.31□□□□□ -1.4
ATXN3-219ENST00000553488 SRP14P37108 136 aaKnown RBP6.31□□□□□ -1.4
ATXN3-219ENST00000553488 ASMTP46597 345 aa6.31□□□□□ -1.4
ATXN3-219ENST00000553488 PPOXP50336 477 aa6.31□□□□□ -1.4
ATXN3-219ENST00000553488 CCR4P51679 360 aa6.31□□□□□ -1.4
ATXN3-219ENST00000553488 ATP12AP54707 1039 aa6.31□□□□□ -1.4
ATXN3-219ENST00000553488 DVL1P1P54792 670 aaPredicted RBP6.31□□□□□ -1.4
ATXN3-219ENST00000553488 CSNK2A1P68400 391 aaPredicted RBP6.31□□□□□ -1.4
ATXN3-219ENST00000553488 CBFBQ13951 182 aa6.31□□□□□ -1.4
ATXN3-219ENST00000553488 MLC1Q15049 377 aa6.31□□□□□ -1.4
ATXN3-219ENST00000553488 EFNB3Q15768 340 aa6.31□□□□□ -1.4
ATXN3-219ENST00000553488 ADIPOQQ15848 244 aa6.31□□□□□ -1.4
ATXN3-219ENST00000553488 CARTPTQ16568 116 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 91 ms