RNA–Protein interactions for RNA: ENST00000553186.5

RBFOX1-215, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 2,196 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-215ENST00000553186 COMMD3-BMI1R4GMX3 469 aa17.74■□□□□ 0.43
RBFOX1-215ENST00000553186 GVINP1Q7Z2Y8 2422 aa17.74■□□□□ 0.43
RBFOX1-215ENST00000553186 CNOT1A5YKK6 2376 aaKnown RBP17.73■□□□□ 0.43
RBFOX1-215ENST00000553186 TNFSF12-TNFSF13A0A0A6YY99 330 aa17.73■□□□□ 0.43
RBFOX1-215ENST00000553186 TMEM72A0PK05 275 aa17.73■□□□□ 0.43
RBFOX1-215ENST00000553186 MCIDASD6RGH6 385 aa17.73■□□□□ 0.43
RBFOX1-215ENST00000553186 SUSD5O60279 629 aa17.73■□□□□ 0.43
RBFOX1-215ENST00000553186 HTR3AP46098 478 aa17.73■□□□□ 0.43
RBFOX1-215ENST00000553186 RPS5P46782 204 aaKnown RBP17.73■□□□□ 0.43
RBFOX1-215ENST00000553186 ZNF468Q5VIY5 522 aaPredicted RBP17.73■□□□□ 0.43
RBFOX1-215ENST00000553186 NXNL2Q5VZ03 156 aa17.73■□□□□ 0.43
RBFOX1-215ENST00000553186 DTX1Q86Y01 620 aa17.73■□□□□ 0.43
RBFOX1-215ENST00000553186 CPOQ8IVL8 374 aa17.73■□□□□ 0.43
RBFOX1-215ENST00000553186 DND1Q8IYX4 353 aaKnown RBP17.73■□□□□ 0.43
RBFOX1-215ENST00000553186 WDSUB1Q8N9V3 476 aa17.73■□□□□ 0.43
RBFOX1-215ENST00000553186 BBS1Q8NFJ9 593 aa17.73■□□□□ 0.43
RBFOX1-215ENST00000553186 PTDSS2Q9BVG9 487 aa17.73■□□□□ 0.43
RBFOX1-215ENST00000553186 TAPBPLQ9BX59 468 aa17.73■□□□□ 0.43
RBFOX1-215ENST00000553186 RYDENQ9NUL5 291 aaKnown RBP17.73■□□□□ 0.43
RBFOX1-215ENST00000553186 FAM183AA6NL82 134 aa17.73■□□□□ 0.43
RBFOX1-215ENST00000553186 CEACAM1P13688 526 aa17.73■□□□□ 0.43
RBFOX1-215ENST00000553186 ATP1A4Q13733 1029 aa17.73■□□□□ 0.43
RBFOX1-215ENST00000553186 PRAMEF20Q5VT98 475 aa17.73■□□□□ 0.43
RBFOX1-215ENST00000553186 ASCL5Q7RTU5 278 aa17.73■□□□□ 0.43
RBFOX1-215ENST00000553186 IGFN1Q86VF2 1251 aa17.73■□□□□ 0.43
RBFOX1-215ENST00000553186 TMEM156Q8N614 296 aa17.73■□□□□ 0.43
RBFOX1-215ENST00000553186 C10orf53Q8N6V4 93 aa17.73■□□□□ 0.43
RBFOX1-215ENST00000553186 PAQR8Q8TEZ7 354 aa17.73■□□□□ 0.43
RBFOX1-215ENST00000553186 PSMF1Q92530 271 aa17.73■□□□□ 0.43
RBFOX1-215ENST00000553186 ISOC1Q96CN7 298 aa17.73■□□□□ 0.43
RBFOX1-215ENST00000553186 GPX7Q96SL4 187 aaPredicted RBP17.73■□□□□ 0.43
RBFOX1-215ENST00000553186 NAA50Q9GZZ1 169 aaKnown RBP17.73■□□□□ 0.43
RBFOX1-215ENST00000553186 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP17.73■□□□□ 0.43
RBFOX1-215ENST00000553186 TRAV36DV7A0A075B6V5 113 aa17.72■□□□□ 0.43
RBFOX1-215ENST00000553186 SNTNA6NMZ2 147 aa17.72■□□□□ 0.43
RBFOX1-215ENST00000553186 ZNF701M0R085 212 aaPredicted RBP17.72■□□□□ 0.43
RBFOX1-215ENST00000553186 PTHP01270 115 aa17.72■□□□□ 0.43
RBFOX1-215ENST00000553186 TSPAN19P0C672 248 aa17.72■□□□□ 0.43
RBFOX1-215ENST00000553186 CCL3P10147 92 aa17.72■□□□□ 0.43
RBFOX1-215ENST00000553186 PRPS1P60891 318 aa17.72■□□□□ 0.43
RBFOX1-215ENST00000553186 B3GNTL1Q67FW5 361 aaPredicted RBP17.72■□□□□ 0.43
RBFOX1-215ENST00000553186 DPY19L2P2Q6ZN68 376 aa17.72■□□□□ 0.43
RBFOX1-215ENST00000553186 CXXC5Q7LFL8 322 aaKnown RBP17.72■□□□□ 0.43
RBFOX1-215ENST00000553186 SIRT6Q8N6T7 355 aa17.72■□□□□ 0.43
RBFOX1-215ENST00000553186 OR2M3Q8NG83 312 aa17.72■□□□□ 0.43
RBFOX1-215ENST00000553186 MOSPD2Q8NHP6 518 aa17.72■□□□□ 0.43
RBFOX1-215ENST00000553186 FCGR1BQ92637 280 aa17.72■□□□□ 0.43
RBFOX1-215ENST00000553186 PTP4A1Q93096 173 aa17.72■□□□□ 0.43
RBFOX1-215ENST00000553186 NMD3Q96D46 503 aaKnown RBP17.72■□□□□ 0.43
RBFOX1-215ENST00000553186 TMEM80Q96HE8 168 aa17.72■□□□□ 0.43
RBFOX1-215ENST00000553186 DOK1Q99704 481 aa17.72■□□□□ 0.43
RBFOX1-215ENST00000553186 FKRPQ9H9S5 495 aa17.72■□□□□ 0.43
RBFOX1-215ENST00000553186 PROK2Q9HC23 129 aa17.72■□□□□ 0.43
RBFOX1-215ENST00000553186 NRIP3Q9NQ35 241 aa17.72■□□□□ 0.43
RBFOX1-215ENST00000553186 FBXL2Q9UKC9 423 aa17.72■□□□□ 0.43
RBFOX1-215ENST00000553186 VDAC3Q9Y277 283 aa17.72■□□□□ 0.43
RBFOX1-215ENST00000553186 A8MVM7 634 aa17.72■□□□□ 0.43
RBFOX1-215ENST00000553186 SLC25A12O75746 678 aa17.72■□□□□ 0.43
RBFOX1-215ENST00000553186 BGLAPP02818 100 aa17.72■□□□□ 0.43
RBFOX1-215ENST00000553186 ADORA3P0DMS8 318 aa17.72■□□□□ 0.43
RBFOX1-215ENST00000553186 CD82P27701 267 aa17.72■□□□□ 0.43
RBFOX1-215ENST00000553186 UQCRC1P31930 480 aa17.72■□□□□ 0.43
RBFOX1-215ENST00000553186 MTNR1AP48039 350 aa17.72■□□□□ 0.43
RBFOX1-215ENST00000553186 CDH11P55287 796 aa17.72■□□□□ 0.43
RBFOX1-215ENST00000553186 TMEM44Q2T9K0 475 aa17.72■□□□□ 0.43
RBFOX1-215ENST00000553186 PLBD1Q6P4A8 553 aa17.72■□□□□ 0.43
RBFOX1-215ENST00000553186 RAB43Q86YS6 212 aa17.72■□□□□ 0.43
RBFOX1-215ENST00000553186 FADS6Q8N9I5 356 aa17.72■□□□□ 0.43
RBFOX1-215ENST00000553186 LRRC75AQ8NAA5 344 aa17.72■□□□□ 0.43
RBFOX1-215ENST00000553186 OR52I1Q8NGK6 324 aa17.72■□□□□ 0.43
RBFOX1-215ENST00000553186 ZNF420Q8TAQ5 688 aaPredicted RBP17.72■□□□□ 0.43
RBFOX1-215ENST00000553186 RFKQ969G6 155 aa17.72■□□□□ 0.43
RBFOX1-215ENST00000553186 LGALS12Q96DT0 336 aa17.72■□□□□ 0.43
RBFOX1-215ENST00000553186 ERMAPQ96PL5 475 aaPredicted RBP17.72■□□□□ 0.43
RBFOX1-215ENST00000553186 HCAR1Q9BXC0 346 aa17.72■□□□□ 0.43
RBFOX1-215ENST00000553186 YIPF3Q9GZM5 350 aa17.72■□□□□ 0.43
RBFOX1-215ENST00000553186 ZNF229Q9UJW7 825 aa17.72■□□□□ 0.43
RBFOX1-215ENST00000553186 ADAM18Q9Y3Q7 739 aa17.72■□□□□ 0.43
RBFOX1-215ENST00000553186 AQP2P41181 271 aa17.71■□□□□ 0.43
RBFOX1-215ENST00000553186 PLPPR5Q32ZL2 321 aa17.71■□□□□ 0.43
RBFOX1-215ENST00000553186 SLC25A53Q5H9E4 307 aa17.71■□□□□ 0.43
RBFOX1-215ENST00000553186 ARHGAP11AQ6P4F7 1023 aa17.71■□□□□ 0.43
RBFOX1-215ENST00000553186 IL22RA1Q8N6P7 574 aa17.71■□□□□ 0.43
RBFOX1-215ENST00000553186 RNFT2Q96EX2 444 aa17.71■□□□□ 0.43
RBFOX1-215ENST00000553186 ANGPTL4Q9BY76 406 aa17.71■□□□□ 0.43
RBFOX1-215ENST00000553186 ASCL3Q9NQ33 180 aa17.71■□□□□ 0.43
RBFOX1-215ENST00000553186 HPF1Q9NWY4 346 aa17.71■□□□□ 0.43
RBFOX1-215ENST00000553186 IER3IP1Q9Y5U9 82 aa17.71■□□□□ 0.43
RBFOX1-215ENST00000553186 MPDZO75970 2070 aa17.71■□□□□ 0.43
RBFOX1-215ENST00000553186 BLOC1S5-TXNDC5H3BN57 136 aa17.7■□□□□ 0.42
RBFOX1-215ENST00000553186 ARPC3O15145 178 aa17.7■□□□□ 0.42
RBFOX1-215ENST00000553186 HK1P19367 917 aa17.7■□□□□ 0.42
RBFOX1-215ENST00000553186 PSMB9P28065 219 aa17.7■□□□□ 0.42
RBFOX1-215ENST00000553186 NOS3P29474 1203 aa17.7■□□□□ 0.42
RBFOX1-215ENST00000553186 RBMS1P29558 406 aaKnown RBP17.7■□□□□ 0.42
RBFOX1-215ENST00000553186 HTR1FP30939 366 aa17.7■□□□□ 0.42
RBFOX1-215ENST00000553186 APOBEC1P41238 236 aaKnown RBP17.7■□□□□ 0.42
RBFOX1-215ENST00000553186 RAB40BQ12829 278 aa17.7■□□□□ 0.42
RBFOX1-215ENST00000553186 FOXF1Q12946 379 aa17.7■□□□□ 0.42
RBFOX1-215ENST00000553186 ITGADQ13349 1161 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms