RNA–Protein interactions for RNA: ENST00000552480.1

CACNB3-223, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, human

TSL 3

Gene CACNB3, Length 927 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNB3-223	ENST00000552480	ARSK	Q6UWY0	536 aa		11.51	□□□□□ -0.57
CACNB3-223	ENST00000552480	DPY19L2P2	Q6ZN68	376 aa		11.51	□□□□□ -0.57
CACNB3-223	ENST00000552480	GTF2IRD2	Q86UP8	949 aa		11.51	□□□□□ -0.57
CACNB3-223	ENST00000552480	GID4	Q8IVV7	300 aa		11.51	□□□□□ -0.57
CACNB3-223	ENST00000552480	SIRT6	Q8N6T7	355 aa		11.51	□□□□□ -0.57
CACNB3-223	ENST00000552480	OR4K17	Q8NGC6	315 aa		11.51	□□□□□ -0.57
CACNB3-223	ENST00000552480	OR13F1	Q8NGS4	319 aa		11.51	□□□□□ -0.57
CACNB3-223	ENST00000552480	OR6S1	Q8NH40	331 aa		11.51	□□□□□ -0.57
CACNB3-223	ENST00000552480	C9orf43	Q8TAL5	461 aa	Predicted RBP	11.51	□□□□□ -0.57
CACNB3-223	ENST00000552480	FAR1	Q8WVX9	515 aa		11.51	□□□□□ -0.57
CACNB3-223	ENST00000552480	FCGR1B	Q92637	280 aa		11.51	□□□□□ -0.57
CACNB3-223	ENST00000552480	RFK	Q969G6	155 aa		11.51	□□□□□ -0.57
CACNB3-223	ENST00000552480	TAAR8	Q969N4	342 aa		11.51	□□□□□ -0.57
CACNB3-223	ENST00000552480	DGCR14	Q96DF8	476 aa	Known RBP	11.51	□□□□□ -0.57
CACNB3-223	ENST00000552480	MRGPRX4	Q96LA9	322 aa		11.51	□□□□□ -0.57
CACNB3-223	ENST00000552480	SGCZ	Q96LD1	299 aa		11.51	□□□□□ -0.57
CACNB3-223	ENST00000552480	MOGAT1	Q96PD6	335 aa		11.51	□□□□□ -0.57
CACNB3-223	ENST00000552480	GPX7	Q96SL4	187 aa	Predicted RBP	11.51	□□□□□ -0.57
CACNB3-223	ENST00000552480	WDR70	Q9NW82	654 aa		11.51	□□□□□ -0.57
CACNB3-223	ENST00000552480	DLL3	Q9NYJ7	618 aa		11.51	□□□□□ -0.57
CACNB3-223	ENST00000552480	HIF3A	Q9Y2N7	669 aa		11.51	□□□□□ -0.57
CACNB3-223	ENST00000552480	SLC6A5	Q9Y345	797 aa		11.51	□□□□□ -0.57
CACNB3-223	ENST00000552480	CEPT1	Q9Y6K0	416 aa		11.51	□□□□□ -0.57
CACNB3-223	ENST00000552480		A0A087WZY1	265 aa		11.5	□□□□□ -0.57
CACNB3-223	ENST00000552480	IRGM	A1A4Y4	181 aa		11.5	□□□□□ -0.57
CACNB3-223	ENST00000552480	RIIAD1	A6NNX1	92 aa		11.5	□□□□□ -0.57
CACNB3-223	ENST00000552480	MCIDAS	D6RGH6	385 aa		11.5	□□□□□ -0.57
CACNB3-223	ENST00000552480		M0R3G1	203 aa		11.5	□□□□□ -0.57
CACNB3-223	ENST00000552480	SNPH	O15079	494 aa		11.5	□□□□□ -0.57
CACNB3-223	ENST00000552480	SEC14L2	O76054	403 aa		11.5	□□□□□ -0.57
CACNB3-223	ENST00000552480	WISP1	O95388	367 aa		11.5	□□□□□ -0.57
CACNB3-223	ENST00000552480	SLC2A10	O95528	541 aa		11.5	□□□□□ -0.57
CACNB3-223	ENST00000552480	IFNG	P01579	166 aa		11.5	□□□□□ -0.57
CACNB3-223	ENST00000552480	HIST1H2AB	P04908	130 aa		11.5	□□□□□ -0.57
CACNB3-223	ENST00000552480	TSPAN19	P0C672	248 aa		11.5	□□□□□ -0.57
CACNB3-223	ENST00000552480	PEPD	P12955	493 aa		11.5	□□□□□ -0.57
CACNB3-223	ENST00000552480	HK1	P19367	917 aa		11.5	□□□□□ -0.57
CACNB3-223	ENST00000552480	UQCRC1	P31930	480 aa		11.5	□□□□□ -0.57
CACNB3-223	ENST00000552480	PLA2G5	P39877	138 aa		11.5	□□□□□ -0.57
CACNB3-223	ENST00000552480	RPS5	P46782	204 aa	Known RBP	11.5	□□□□□ -0.57
CACNB3-223	ENST00000552480	ST13	P50502	369 aa	Known RBP	11.5	□□□□□ -0.57
CACNB3-223	ENST00000552480	MAP2K6	P52564	334 aa		11.5	□□□□□ -0.57
CACNB3-223	ENST00000552480	LTB	Q06643	244 aa		11.5	□□□□□ -0.57
CACNB3-223	ENST00000552480	AIMP2	Q13155	320 aa	Known RBP	11.5	□□□□□ -0.57
CACNB3-223	ENST00000552480	IRF3	Q14653	427 aa		11.5	□□□□□ -0.57
CACNB3-223	ENST00000552480	KLHL22	Q53GT1	634 aa		11.5	□□□□□ -0.57
CACNB3-223	ENST00000552480	DCAF10	Q5QP82	559 aa		11.5	□□□□□ -0.57
CACNB3-223	ENST00000552480	SLC35F1	Q5T1Q4	408 aa		11.5	□□□□□ -0.57
CACNB3-223	ENST00000552480	FAM69A	Q5T7M9	428 aa		11.5	□□□□□ -0.57
CACNB3-223	ENST00000552480	C1orf140	Q5VVS0	124 aa		11.5	□□□□□ -0.57
CACNB3-223	ENST00000552480	UBE2U	Q5VVX9	321 aa		11.5	□□□□□ -0.57
CACNB3-223	ENST00000552480	NXNL2	Q5VZ03	156 aa		11.5	□□□□□ -0.57
CACNB3-223	ENST00000552480	B3GNTL1	Q67FW5	361 aa	Predicted RBP	11.5	□□□□□ -0.57
CACNB3-223	ENST00000552480	CCDC81	Q6ZN84	652 aa		11.5	□□□□□ -0.57
CACNB3-223	ENST00000552480	HIST3H2A	Q7L7L0	130 aa		11.5	□□□□□ -0.57
CACNB3-223	ENST00000552480	CXXC5	Q7LFL8	322 aa	Known RBP	11.5	□□□□□ -0.57
CACNB3-223	ENST00000552480	MAMDC2	Q7Z304	686 aa	Predicted RBP	11.5	□□□□□ -0.57
CACNB3-223	ENST00000552480	NANOGNB	Q7Z5D8	188 aa		11.5	□□□□□ -0.57
CACNB3-223	ENST00000552480	PLCZ1	Q86YW0	608 aa		11.5	□□□□□ -0.57
CACNB3-223	ENST00000552480	WDSUB1	Q8N9V3	476 aa		11.5	□□□□□ -0.57
CACNB3-223	ENST00000552480	PSMF1	Q92530	271 aa		11.5	□□□□□ -0.57
CACNB3-223	ENST00000552480	RORB	Q92753	470 aa		11.5	□□□□□ -0.57
CACNB3-223	ENST00000552480	HIST1H2AC	Q93077	130 aa		11.5	□□□□□ -0.57
CACNB3-223	ENST00000552480	C1GALT1C1	Q96EU7	318 aa		11.5	□□□□□ -0.57
CACNB3-223	ENST00000552480	TMEM80	Q96HE8	168 aa		11.5	□□□□□ -0.57
CACNB3-223	ENST00000552480	TMEM41A	Q96HV5	264 aa		11.5	□□□□□ -0.57
CACNB3-223	ENST00000552480	FER1L6-AS2	Q96M78	137 aa		11.5	□□□□□ -0.57
CACNB3-223	ENST00000552480	ERMAP	Q96PL5	475 aa	Predicted RBP	11.5	□□□□□ -0.57
CACNB3-223	ENST00000552480	PTDSS2	Q9BVG9	487 aa		11.5	□□□□□ -0.57
CACNB3-223	ENST00000552480	TAPBPL	Q9BX59	468 aa		11.5	□□□□□ -0.57
CACNB3-223	ENST00000552480	CDCA4	Q9BXL8	241 aa		11.5	□□□□□ -0.57
CACNB3-223	ENST00000552480	LHPP	Q9H008	270 aa		11.5	□□□□□ -0.57
CACNB3-223	ENST00000552480	PTGES2	Q9H7Z7	377 aa		11.5	□□□□□ -0.57
CACNB3-223	ENST00000552480	ACOT13	Q9NPJ3	140 aa		11.5	□□□□□ -0.57
CACNB3-223	ENST00000552480	HINT3	Q9NQE9	182 aa	Known RBP	11.5	□□□□□ -0.57
CACNB3-223	ENST00000552480	MRPS18A	Q9NVS2	196 aa	Known RBP	11.5	□□□□□ -0.57
CACNB3-223	ENST00000552480	CHRNA9	Q9UGM1	479 aa		11.5	□□□□□ -0.57
CACNB3-223	ENST00000552480	KLHL21	Q9UJP4	597 aa		11.5	□□□□□ -0.57
CACNB3-223	ENST00000552480	AKAP8L	Q9ULX6	646 aa	Known RBP eCLIP	11.5	□□□□□ -0.57
CACNB3-223	ENST00000552480	VDAC3	Q9Y277	283 aa		11.5	□□□□□ -0.57
CACNB3-223	ENST00000552480	PTPRB	P23467	1997 aa		11.5	□□□□□ -0.57
CACNB3-223	ENST00000552480	PCNX2	A6NKB5	2137 aa		11.5	□□□□□ -0.57
CACNB3-223	ENST00000552480	ZC3H12D	A2A288	527 aa	Known RBP	11.49	□□□□□ -0.57
CACNB3-223	ENST00000552480	CCDC160	A6NGH7	325 aa		11.49	□□□□□ -0.57
CACNB3-223	ENST00000552480		H3BSA7	217 aa		11.49	□□□□□ -0.57
CACNB3-223	ENST00000552480	ARPC3	O15145	178 aa		11.49	□□□□□ -0.57
CACNB3-223	ENST00000552480	ZNF208	O43345	1280 aa		11.49	□□□□□ -0.57
CACNB3-223	ENST00000552480	IDH3B	O43837	385 aa		11.49	□□□□□ -0.57
CACNB3-223	ENST00000552480	OR2T1	O43869	369 aa		11.49	□□□□□ -0.57
CACNB3-223	ENST00000552480	SNX4	O95219	450 aa		11.49	□□□□□ -0.57
CACNB3-223	ENST00000552480	AHSA1	O95433	338 aa		11.49	□□□□□ -0.57
CACNB3-223	ENST00000552480		P04436	131 aa		11.49	□□□□□ -0.57
CACNB3-223	ENST00000552480	LIF	P15018	202 aa		11.49	□□□□□ -0.57
CACNB3-223	ENST00000552480	ZNF3	P17036	446 aa		11.49	□□□□□ -0.57
CACNB3-223	ENST00000552480	NOS3	P29474	1203 aa		11.49	□□□□□ -0.57
CACNB3-223	ENST00000552480	C21orf33	P30042	268 aa	Predicted RBP	11.49	□□□□□ -0.57
CACNB3-223	ENST00000552480	HTR1F	P30939	366 aa		11.49	□□□□□ -0.57
CACNB3-223	ENST00000552480	RPL4	P36578	427 aa	Known RBP	11.49	□□□□□ -0.57
CACNB3-223	ENST00000552480	AQP2	P41181	271 aa		11.49	□□□□□ -0.57
CACNB3-223	ENST00000552480	GP2	P55259	537 aa	Known RBP	11.49	□□□□□ -0.57

Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms