RNA–Protein interactions for RNA: ENST00000552338.5

LIMA1-211, Transcript of LIM domain and actin binding 1, humanhuman

TSL 4

Gene LIMA1, Length 555 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-211ENST00000552338 FGD3Q5JSP0 725 aa8.62□□□□□ -1.03
LIMA1-211ENST00000552338 WIPI1Q5MNZ9 446 aaPredicted RBP8.62□□□□□ -1.03
LIMA1-211ENST00000552338 C1orf140Q5VVS0 124 aa8.62□□□□□ -1.03
LIMA1-211ENST00000552338 FBXW10Q5XX13 1052 aa8.62□□□□□ -1.03
LIMA1-211ENST00000552338 ZNF730Q6ZMV8 503 aa8.62□□□□□ -1.03
LIMA1-211ENST00000552338 RASSF6Q6ZTQ3 369 aa8.62□□□□□ -1.03
LIMA1-211ENST00000552338 ESPNLQ6ZVH7 1005 aa8.62□□□□□ -1.03
LIMA1-211ENST00000552338 ADGRE4PQ86SQ3 457 aa8.62□□□□□ -1.03
LIMA1-211ENST00000552338 YRDCQ86U90 279 aaKnown RBP8.62□□□□□ -1.03
LIMA1-211ENST00000552338 GGNQ86UU5 652 aa8.62□□□□□ -1.03
LIMA1-211ENST00000552338 STK32CQ86UX6 486 aa8.62□□□□□ -1.03
LIMA1-211ENST00000552338 NRMQ8IXM6 262 aa8.62□□□□□ -1.03
LIMA1-211ENST00000552338 CDK20Q8IZL9 346 aa8.62□□□□□ -1.03
LIMA1-211ENST00000552338 SCAIQ8N9R8 606 aa8.62□□□□□ -1.03
LIMA1-211ENST00000552338 OR14L1PQ8NHC6 308 aa8.62□□□□□ -1.03
LIMA1-211ENST00000552338 PIGXQ8TBF5 258 aa8.62□□□□□ -1.03
LIMA1-211ENST00000552338 FAR1Q8WVX9 515 aa8.62□□□□□ -1.03
LIMA1-211ENST00000552338 TAAR8Q969N4 342 aa8.62□□□□□ -1.03
LIMA1-211ENST00000552338 EME1Q96AY2 570 aa8.62□□□□□ -1.03
LIMA1-211ENST00000552338 BPIFA2Q96DR5 249 aa8.62□□□□□ -1.03
LIMA1-211ENST00000552338 KTI12Q96EK9 354 aaPredicted RBP8.62□□□□□ -1.03
LIMA1-211ENST00000552338 GPR137Q96N19 417 aa8.62□□□□□ -1.03
LIMA1-211ENST00000552338 HS3ST6Q96QI5 342 aa8.62□□□□□ -1.03
LIMA1-211ENST00000552338 UBL7Q96S82 380 aaPredicted RBP8.62□□□□□ -1.03
LIMA1-211ENST00000552338 GPA33Q99795 319 aa8.62□□□□□ -1.03
LIMA1-211ENST00000552338 PRDM14Q9GZV8 571 aa8.62□□□□□ -1.03
LIMA1-211ENST00000552338 COQ10BQ9H8M1 238 aa8.62□□□□□ -1.03
LIMA1-211ENST00000552338 C20orf141Q9NUB4 165 aa8.62□□□□□ -1.03
LIMA1-211ENST00000552338 REV1Q9UBZ9 1251 aa8.62□□□□□ -1.03
LIMA1-211ENST00000552338 ENOPH1Q9UHY7 261 aa8.62□□□□□ -1.03
LIMA1-211ENST00000552338 ZNF229Q9UJW7 825 aa8.62□□□□□ -1.03
LIMA1-211ENST00000552338 SIGLEC7Q9Y286 467 aa8.62□□□□□ -1.03
LIMA1-211ENST00000552338 HIF3AQ9Y2N7 669 aa8.62□□□□□ -1.03
LIMA1-211ENST00000552338 CORINQ9Y5Q5 1042 aa8.62□□□□□ -1.03
LIMA1-211ENST00000552338 MAGED1Q9Y5V3 778 aaPredicted RBP8.62□□□□□ -1.03
LIMA1-211ENST00000552338 ZGRF1Q86YA3 2104 aa8.62□□□□□ -1.03
LIMA1-211ENST00000552338 SHANK1Q9Y566 2161 aa8.61□□□□□ -1.03
LIMA1-211ENST00000552338 A0A0J9YW62 118 aa8.61□□□□□ -1.03
LIMA1-211ENST00000552338 NPIPB13A6NJU9 1138 aa8.61□□□□□ -1.03
LIMA1-211ENST00000552338 LIPT2A6NK58 231 aa8.61□□□□□ -1.03
LIMA1-211ENST00000552338 NPIPB4C9JG80 1138 aa8.61□□□□□ -1.03
LIMA1-211ENST00000552338 PDLIM1O00151 329 aa8.61□□□□□ -1.03
LIMA1-211ENST00000552338 CDC42EP2O14613 210 aa8.61□□□□□ -1.03
LIMA1-211ENST00000552338 OR10H3O60404 316 aa8.61□□□□□ -1.03
LIMA1-211ENST00000552338 OR7A10O76100 309 aa8.61□□□□□ -1.03
LIMA1-211ENST00000552338 CELA3AP09093 270 aa8.61□□□□□ -1.03
LIMA1-211ENST00000552338 IMPDH2P12268 514 aa8.61□□□□□ -1.03
LIMA1-211ENST00000552338 MAKP20794 623 aa8.61□□□□□ -1.03
LIMA1-211ENST00000552338 PRKACGP22612 351 aa8.61□□□□□ -1.03
LIMA1-211ENST00000552338 PEX2P28328 305 aa8.61□□□□□ -1.03
LIMA1-211ENST00000552338 P2RY4P51582 365 aa8.61□□□□□ -1.03
LIMA1-211ENST00000552338 CLDN18P56856 261 aa8.61□□□□□ -1.03
LIMA1-211ENST00000552338 RAC3P60763 192 aa8.61□□□□□ -1.03
LIMA1-211ENST00000552338 ESRRGP62508 458 aa8.61□□□□□ -1.03
LIMA1-211ENST00000552338 TRIP10Q15642 601 aa8.61□□□□□ -1.03
LIMA1-211ENST00000552338 RAET1LQ5VY80 246 aa8.61□□□□□ -1.03
LIMA1-211ENST00000552338 LPCAT4Q643R3 524 aa8.61□□□□□ -1.03
LIMA1-211ENST00000552338 RPL13AP3Q6NVV1 102 aa8.61□□□□□ -1.03
LIMA1-211ENST00000552338 NHLRC1Q6VVB1 395 aa8.61□□□□□ -1.03
LIMA1-211ENST00000552338 CHERPQ8IWX8 916 aaKnown RBP8.61□□□□□ -1.03
LIMA1-211ENST00000552338 HS3ST5Q8IZT8 346 aa8.61□□□□□ -1.03
LIMA1-211ENST00000552338 CBR4Q8N4T8 237 aa8.61□□□□□ -1.03
LIMA1-211ENST00000552338 ICA1LQ8NDH6 482 aa8.61□□□□□ -1.03
LIMA1-211ENST00000552338 OR9Q2Q8NGE9 314 aa8.61□□□□□ -1.03
LIMA1-211ENST00000552338 PFN4Q8NHR9 129 aa8.61□□□□□ -1.03
LIMA1-211ENST00000552338 ABTB1Q969K4 478 aaPredicted RBP8.61□□□□□ -1.03
LIMA1-211ENST00000552338 SDCCAG3Q96C92 435 aa8.61□□□□□ -1.03
LIMA1-211ENST00000552338 SGTBQ96EQ0 304 aa8.61□□□□□ -1.03
LIMA1-211ENST00000552338 ARL5BQ96KC2 179 aa8.61□□□□□ -1.03
LIMA1-211ENST00000552338 KLHL15Q96M94 604 aa8.61□□□□□ -1.03
LIMA1-211ENST00000552338 SFXN2Q96NB2 322 aa8.61□□□□□ -1.03
LIMA1-211ENST00000552338 GPX7Q96SL4 187 aaPredicted RBP8.61□□□□□ -1.03
LIMA1-211ENST00000552338 NIPSNAP1Q9BPW8 284 aa8.61□□□□□ -1.03
LIMA1-211ENST00000552338 SLX1AQ9BQ83 275 aa8.61□□□□□ -1.03
LIMA1-211ENST00000552338 GABARAPL3Q9BY60 117 aa8.61□□□□□ -1.03
LIMA1-211ENST00000552338 VCX3BQ9H321 246 aa8.61□□□□□ -1.03
LIMA1-211ENST00000552338 ZNF71Q9NQZ8 489 aaPredicted RBP8.61□□□□□ -1.03
LIMA1-211ENST00000552338 MRPL39Q9NYK5 338 aaKnown RBP8.61□□□□□ -1.03
LIMA1-211ENST00000552338 B3GALT5Q9Y2C3 310 aa8.61□□□□□ -1.03
LIMA1-211ENST00000552338 POFUT2Q9Y2G5 429 aa8.61□□□□□ -1.03
LIMA1-211ENST00000552338 PHF3Q92576 2039 aaKnown RBP8.61□□□□□ -1.03
LIMA1-211ENST00000552338 ENO4A6NNW6 628 aa8.6□□□□□ -1.03
LIMA1-211ENST00000552338 FAM166BA8MTA8 275 aa8.6□□□□□ -1.03
LIMA1-211ENST00000552338 SHISA8B8ZZ34 492 aa8.6□□□□□ -1.03
LIMA1-211ENST00000552338 EI24O14681 340 aa8.6□□□□□ -1.03
LIMA1-211ENST00000552338 TFECO14948 347 aaPredicted RBP8.6□□□□□ -1.03
LIMA1-211ENST00000552338 ATXN7O15265 892 aaPredicted RBP8.6□□□□□ -1.03
LIMA1-211ENST00000552338 GMFGO60234 142 aa8.6□□□□□ -1.03
LIMA1-211ENST00000552338 EIF1BO60739 113 aaKnown RBP8.6□□□□□ -1.03
LIMA1-211ENST00000552338 TRAPPC6AO75865 159 aa8.6□□□□□ -1.03
LIMA1-211ENST00000552338 AHSA1O95433 338 aa8.6□□□□□ -1.03
LIMA1-211ENST00000552338 IFI30P13284 250 aa8.6□□□□□ -1.03
LIMA1-211ENST00000552338 OSMP13725 252 aa8.6□□□□□ -1.03
LIMA1-211ENST00000552338 APEHP13798 732 aaKnown RBP8.6□□□□□ -1.03
LIMA1-211ENST00000552338 FUT1P19526 365 aa8.6□□□□□ -1.03
LIMA1-211ENST00000552338 UQCRC1P31930 480 aa8.6□□□□□ -1.03
LIMA1-211ENST00000552338 IDUAP35475 653 aa8.6□□□□□ -1.03
LIMA1-211ENST00000552338 VHLP40337 213 aa8.6□□□□□ -1.03
LIMA1-211ENST00000552338 RFC3P40938 356 aa8.6□□□□□ -1.03
LIMA1-211ENST00000552338 FXYD6P3P58550 94 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms