RNA–Protein interactions for RNA: ENST00000551716.5

CACNB3-220, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 544 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-220ENST00000551716 SF3B5Q9BWJ5 86 aaKnown RBP13.2□□□□□ -0.3
CACNB3-220ENST00000551716 SLITRK2Q9H156 845 aa13.2□□□□□ -0.3
CACNB3-220ENST00000551716 ESM1Q9NQ30 184 aa13.2□□□□□ -0.3
CACNB3-220ENST00000551716 CTPS2Q9NRF8 586 aa13.2□□□□□ -0.3
CACNB3-220ENST00000551716 REV1Q9UBZ9 1251 aa13.2□□□□□ -0.3
CACNB3-220ENST00000551716 CMAHPQ9Y471 501 aa13.2□□□□□ -0.3
CACNB3-220ENST00000551716 DUXAA6NLW8 204 aa13.19□□□□□ -0.3
CACNB3-220ENST00000551716 IGKV3-15P01624 115 aa13.19□□□□□ -0.3
CACNB3-220ENST00000551716 CALCRP30988 508 aa13.19□□□□□ -0.3
CACNB3-220ENST00000551716 ASMTP46597 345 aa13.19□□□□□ -0.3
CACNB3-220ENST00000551716 LMO4P61968 165 aa13.19□□□□□ -0.3
CACNB3-220ENST00000551716 IL13RA1P78552 427 aa13.19□□□□□ -0.3
CACNB3-220ENST00000551716 ZNF311Q5JNZ3 666 aa13.19□□□□□ -0.3
CACNB3-220ENST00000551716 HIST2H2BDQ6DRA6 164 aa13.19□□□□□ -0.3
CACNB3-220ENST00000551716 PAQR6Q6TCH4 344 aa13.19□□□□□ -0.3
CACNB3-220ENST00000551716 SYT14Q8NB59 555 aa13.19□□□□□ -0.3
CACNB3-220ENST00000551716 BCL2L2Q92843 193 aaPredicted RBP13.19□□□□□ -0.3
CACNB3-220ENST00000551716 MOAP1Q96BY2 351 aa13.19□□□□□ -0.3
CACNB3-220ENST00000551716 DDIT4LQ96D03 193 aa13.19□□□□□ -0.3
CACNB3-220ENST00000551716 AURKBQ96GD4 344 aaPredicted RBP13.19□□□□□ -0.3
CACNB3-220ENST00000551716 SDF2Q99470 211 aa13.19□□□□□ -0.3
CACNB3-220ENST00000551716 ZNF416Q9BWM5 594 aa13.19□□□□□ -0.3
CACNB3-220ENST00000551716 NARFLQ9H6Q4 476 aa13.19□□□□□ -0.3
CACNB3-220ENST00000551716 UNKLQ9H9P5 680 aaKnown RBP13.19□□□□□ -0.3
CACNB3-220ENST00000551716 G6PC2Q9NQR9 355 aa13.19□□□□□ -0.3
CACNB3-220ENST00000551716 SIRT3Q9NTG7 399 aaPredicted RBP13.19□□□□□ -0.3
CACNB3-220ENST00000551716 C1orf109Q9NX04 203 aa13.19□□□□□ -0.3
CACNB3-220ENST00000551716 PCDHGB4Q9UN71 923 aa13.19□□□□□ -0.3
CACNB3-220ENST00000551716 TRIM49D1C9J1S8 452 aa13.18□□□□□ -0.3
CACNB3-220ENST00000551716 M0R233 179 aa13.18□□□□□ -0.3
CACNB3-220ENST00000551716 SLC28A1O00337 649 aa13.18□□□□□ -0.3
CACNB3-220ENST00000551716 STX11O75558 287 aa13.18□□□□□ -0.3
CACNB3-220ENST00000551716 AK1P00568 194 aa13.18□□□□□ -0.3
CACNB3-220ENST00000551716 GSTA1P08263 222 aa13.18□□□□□ -0.3
CACNB3-220ENST00000551716 UBTFL6P0CB48 400 aaPredicted RBP13.18□□□□□ -0.3
CACNB3-220ENST00000551716 CBR1P16152 277 aa13.18□□□□□ -0.3
CACNB3-220ENST00000551716 GATA3P23771 443 aa13.18□□□□□ -0.3
CACNB3-220ENST00000551716 FOXA1P55317 472 aa13.18□□□□□ -0.3
CACNB3-220ENST00000551716 SH3BGRP55822 239 aaPredicted RBP13.18□□□□□ -0.3
CACNB3-220ENST00000551716 SPDYE7PQ495Y7 208 aa13.18□□□□□ -0.3
CACNB3-220ENST00000551716 ELFN2Q5R3F8 820 aa13.18□□□□□ -0.3
CACNB3-220ENST00000551716 ZDHHC24Q6UX98 284 aa13.18□□□□□ -0.3
CACNB3-220ENST00000551716 ADGRG3Q86Y34 549 aa13.18□□□□□ -0.3
CACNB3-220ENST00000551716 TREML1Q86YW5 311 aa13.18□□□□□ -0.3
CACNB3-220ENST00000551716 CDK20Q8IZL9 346 aa13.18□□□□□ -0.3
CACNB3-220ENST00000551716 RIBC1Q8N443 379 aaPredicted RBP13.18□□□□□ -0.3
CACNB3-220ENST00000551716 NATD1Q8N6N6 113 aa13.18□□□□□ -0.3
CACNB3-220ENST00000551716 CCDC126Q96EE4 140 aa13.18□□□□□ -0.3
CACNB3-220ENST00000551716 NAPGQ99747 312 aaPredicted RBP13.18□□□□□ -0.3
CACNB3-220ENST00000551716 FUT8Q9BYC5 575 aa13.18□□□□□ -0.3
CACNB3-220ENST00000551716 OR11A1Q9GZK7 315 aa13.18□□□□□ -0.3
CACNB3-220ENST00000551716 ZNF180Q9UJW8 692 aa13.18□□□□□ -0.3
CACNB3-220ENST00000551716 SLC35A3Q9Y2D2 325 aa13.18□□□□□ -0.3
CACNB3-220ENST00000551716 ZNF208O43345 1280 aa13.17□□□□□ -0.3
CACNB3-220ENST00000551716 PPIHO43447 177 aaKnown RBP13.17□□□□□ -0.3
CACNB3-220ENST00000551716 LGI1O95970 557 aa13.17□□□□□ -0.3
CACNB3-220ENST00000551716 AVPP01185 164 aa13.17□□□□□ -0.3
CACNB3-220ENST00000551716 IGFBP1P08833 259 aaPredicted RBP13.17□□□□□ -0.3
CACNB3-220ENST00000551716 PRTN3P24158 256 aa13.17□□□□□ -0.3
CACNB3-220ENST00000551716 COL8A2P25067 703 aa13.17□□□□□ -0.3
CACNB3-220ENST00000551716 ARR3P36575 388 aa13.17□□□□□ -0.3
CACNB3-220ENST00000551716 RPL3P39023 403 aaKnown RBP13.17□□□□□ -0.3
CACNB3-220ENST00000551716 DAG1Q14118 895 aa13.17□□□□□ -0.3
CACNB3-220ENST00000551716 GPR68Q15743 365 aa13.17□□□□□ -0.3
CACNB3-220ENST00000551716 LSM12Q3MHD2 195 aaKnown RBP13.17□□□□□ -0.3
CACNB3-220ENST00000551716 CCDC36Q8IYA8 594 aa13.17□□□□□ -0.3
CACNB3-220ENST00000551716 SPATA4Q8NEY3 305 aa13.17□□□□□ -0.3
CACNB3-220ENST00000551716 OR9K2Q8NGE7 335 aa13.17□□□□□ -0.3
CACNB3-220ENST00000551716 PSMA8Q8TAA3 256 aa13.17□□□□□ -0.3
CACNB3-220ENST00000551716 OR5P2Q8WZ92 322 aa13.17□□□□□ -0.3
CACNB3-220ENST00000551716 TSSK3Q96PN8 268 aa13.17□□□□□ -0.3
CACNB3-220ENST00000551716 PAFAH2Q99487 392 aa13.17□□□□□ -0.3
CACNB3-220ENST00000551716 TMPRSS13Q9BYE2 586 aa13.17□□□□□ -0.3
CACNB3-220ENST00000551716 TPK1Q9H3S4 243 aa13.17□□□□□ -0.3
CACNB3-220ENST00000551716 GPATCH2Q9NW75 528 aa13.17□□□□□ -0.3
CACNB3-220ENST00000551716 OXSMQ9NWU1 459 aa13.17□□□□□ -0.3
CACNB3-220ENST00000551716 TMEM216Q9P0N5 145 aa13.17□□□□□ -0.3
CACNB3-220ENST00000551716 TMED5Q9Y3A6 229 aa13.17□□□□□ -0.3
CACNB3-220ENST00000551716 CCL27Q9Y4X3 112 aa13.17□□□□□ -0.3
CACNB3-220ENST00000551716 KCNE3Q9Y6H6 103 aa13.17□□□□□ -0.3
CACNB3-220ENST00000551716 PRSS23O95084 383 aa13.16□□□□□ -0.3
CACNB3-220ENST00000551716 MPZL1O95297 269 aa13.16□□□□□ -0.3
CACNB3-220ENST00000551716 GSNP06396 782 aa13.16□□□□□ -0.3
CACNB3-220ENST00000551716 SNRPAP09012 282 aaKnown RBP13.16□□□□□ -0.3
CACNB3-220ENST00000551716 UROSP10746 265 aa13.16□□□□□ -0.3
CACNB3-220ENST00000551716 GNG11P61952 73 aa13.16□□□□□ -0.3
CACNB3-220ENST00000551716 CARM1Q86X55 608 aa13.16□□□□□ -0.3
CACNB3-220ENST00000551716 HOMEZQ8IX15 550 aa13.16□□□□□ -0.3
CACNB3-220ENST00000551716 CCNYL1Q8N7R7 359 aa13.16□□□□□ -0.3
CACNB3-220ENST00000551716 ZIC4Q8N9L1 334 aa13.16□□□□□ -0.3
CACNB3-220ENST00000551716 ANKK1Q8NFD2 765 aa13.16□□□□□ -0.3
CACNB3-220ENST00000551716 RAB39BQ96DA2 213 aa13.16□□□□□ -0.3
CACNB3-220ENST00000551716 FCRL1Q96LA6 429 aa13.16□□□□□ -0.3
CACNB3-220ENST00000551716 OR7D2Q96RA2 312 aa13.16□□□□□ -0.3
CACNB3-220ENST00000551716 GSTO2Q9H4Y5 243 aa13.16□□□□□ -0.3
CACNB3-220ENST00000551716 PPIAL4AQ9Y536 164 aa13.16□□□□□ -0.3
CACNB3-220ENST00000551716 PRKDCP78527 4128 aaKnown RBP13.16□□□□□ -0.3
CACNB3-220ENST00000551716 IGHV2OR16-5A0A0B4J2B6 119 aa13.15□□□□□ -0.3
CACNB3-220ENST00000551716 NR5A2O00482 541 aa13.15□□□□□ -0.3
CACNB3-220ENST00000551716 PLPP2O43688 288 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms