RNA–Protein interactions for RNA: ENST00000550872.1

CHMP1A-209, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-209ENST00000550872 A0A087WUJ7 227 aa14.51□□□□□ -0.09
CHMP1A-209ENST00000550872 IGHV3-15A0A0B4J1V0 119 aa14.51□□□□□ -0.09
CHMP1A-209ENST00000550872 FAM90A27PA6NNH2 459 aa14.51□□□□□ -0.09
CHMP1A-209ENST00000550872 DVL2O14641 736 aa14.51□□□□□ -0.09
CHMP1A-209ENST00000550872 CHP2O43745 196 aa14.51□□□□□ -0.09
CHMP1A-209ENST00000550872 AHSA1O95433 338 aa14.51□□□□□ -0.09
CHMP1A-209ENST00000550872 PLGP00747 810 aaPredicted RBP14.51□□□□□ -0.09
CHMP1A-209ENST00000550872 IFNW1P05000 195 aa14.51□□□□□ -0.09
CHMP1A-209ENST00000550872 BMP5P22003 454 aa14.51□□□□□ -0.09
CHMP1A-209ENST00000550872 OPRM1P35372 400 aa14.51□□□□□ -0.09
CHMP1A-209ENST00000550872 RASSF2P50749 326 aa14.51□□□□□ -0.09
CHMP1A-209ENST00000550872 TAS2R41P59536 307 aa14.51□□□□□ -0.09
CHMP1A-209ENST00000550872 SLC35A1P78382 337 aa14.51□□□□□ -0.09
CHMP1A-209ENST00000550872 PIN1Q13526 163 aaPredicted RBP14.51□□□□□ -0.09
CHMP1A-209ENST00000550872 TRIM25Q14258 630 aaKnown RBP14.51□□□□□ -0.09
CHMP1A-209ENST00000550872 CDSNQ15517 529 aa14.51□□□□□ -0.09
CHMP1A-209ENST00000550872 TSPYL5Q86VY4 417 aaPredicted RBP14.51□□□□□ -0.09
CHMP1A-209ENST00000550872 SLC41A3Q96GZ6 507 aa14.51□□□□□ -0.09
CHMP1A-209ENST00000550872 CLPTM1LQ96KA5 538 aa14.51□□□□□ -0.09
CHMP1A-209ENST00000550872 TAPBPLQ9BX59 468 aa14.51□□□□□ -0.09
CHMP1A-209ENST00000550872 UCK2Q9BZX2 261 aa14.51□□□□□ -0.09
CHMP1A-209ENST00000550872 AMBRA1Q9C0C7 1298 aa14.51□□□□□ -0.09
CHMP1A-209ENST00000550872 POLR2J2Q9GZM3 115 aaKnown RBP14.51□□□□□ -0.09
CHMP1A-209ENST00000550872 POLR2J3Q9H1A7 115 aaKnown RBP14.51□□□□□ -0.09
CHMP1A-209ENST00000550872 ACTR3BQ9P1U1 418 aa14.51□□□□□ -0.09
CHMP1A-209ENST00000550872 ZNF629Q9UEG4 869 aaPredicted RBP14.51□□□□□ -0.09
CHMP1A-209ENST00000550872 SLC7A7Q9UM01 511 aa14.51□□□□□ -0.09
CHMP1A-209ENST00000550872 CLEC4AQ9UMR7 237 aa14.51□□□□□ -0.09
CHMP1A-209ENST00000550872 CACNA1CQ13936 2221 aa14.5□□□□□ -0.09
CHMP1A-209ENST00000550872 NBPF19A0A087WUL8 3843 aa14.5□□□□□ -0.09
CHMP1A-209ENST00000550872 A1L4Q6 167 aa14.5□□□□□ -0.09
CHMP1A-209ENST00000550872 DNPH1O43598 174 aa14.5□□□□□ -0.09
CHMP1A-209ENST00000550872 NPIPB7O75200 414 aa14.5□□□□□ -0.09
CHMP1A-209ENST00000550872 PRKD3O94806 890 aa14.5□□□□□ -0.09
CHMP1A-209ENST00000550872 IL18BPO95998 194 aa14.5□□□□□ -0.09
CHMP1A-209ENST00000550872 THY1P04216 161 aa14.5□□□□□ -0.09
CHMP1A-209ENST00000550872 GPIP06744 558 aa14.5□□□□□ -0.09
CHMP1A-209ENST00000550872 CRHP06850 196 aa14.5□□□□□ -0.09
CHMP1A-209ENST00000550872 KLK2P20151 261 aa14.5□□□□□ -0.09
CHMP1A-209ENST00000550872 FPR1P21462 350 aa14.5□□□□□ -0.09
CHMP1A-209ENST00000550872 IFNA8P32881 189 aa14.5□□□□□ -0.09
CHMP1A-209ENST00000550872 YAP1P46937 504 aaKnown RBP14.5□□□□□ -0.09
CHMP1A-209ENST00000550872 SIRPAP78324 504 aa14.5□□□□□ -0.09
CHMP1A-209ENST00000550872 MS4A2Q01362 244 aa14.5□□□□□ -0.09
CHMP1A-209ENST00000550872 EGR4Q05215 589 aa14.5□□□□□ -0.09
CHMP1A-209ENST00000550872 FOXD4Q12950 439 aaPredicted RBP14.5□□□□□ -0.09
CHMP1A-209ENST00000550872 OR7A5Q15622 319 aa14.5□□□□□ -0.09
CHMP1A-209ENST00000550872 CYP2R1Q6VVX0 501 aa14.5□□□□□ -0.09
CHMP1A-209ENST00000550872 GDF7Q7Z4P5 450 aa14.5□□□□□ -0.09
CHMP1A-209ENST00000550872 P3H2Q8IVL5 708 aa14.5□□□□□ -0.09
CHMP1A-209ENST00000550872 SLC43A2Q8N370 569 aa14.5□□□□□ -0.09
CHMP1A-209ENST00000550872 CNEP1R1Q8N9A8 125 aa14.5□□□□□ -0.09
CHMP1A-209ENST00000550872 RNF128Q8TEB7 428 aa14.5□□□□□ -0.09
CHMP1A-209ENST00000550872 SLC25A36Q96CQ1 311 aa14.5□□□□□ -0.09
CHMP1A-209ENST00000550872 CCDC124Q96CT7 223 aaKnown RBP14.5□□□□□ -0.09
CHMP1A-209ENST00000550872 KTI12Q96EK9 354 aaPredicted RBP14.5□□□□□ -0.09
CHMP1A-209ENST00000550872 PYURFQ96I23 114 aa14.5□□□□□ -0.09
CHMP1A-209ENST00000550872 SFXN3Q9BWM7 321 aa14.5□□□□□ -0.09
CHMP1A-209ENST00000550872 MUC13Q9H3R2 512 aa14.5□□□□□ -0.09
CHMP1A-209ENST00000550872 GLRX2Q9NS18 164 aa14.5□□□□□ -0.09
CHMP1A-209ENST00000550872 RIMS3Q9UJD0 308 aa14.5□□□□□ -0.09
CHMP1A-209ENST00000550872 V9GYQ6 96 aa14.5□□□□□ -0.09
CHMP1A-209ENST00000550872 UNC79Q9P2D8 2635 aa14.5□□□□□ -0.09
CHMP1A-209ENST00000550872 IGKV1D-42A0A075B6H8 117 aa14.49□□□□□ -0.09
CHMP1A-209ENST00000550872 A0A1W2PNV4 684 aa14.49□□□□□ -0.09
CHMP1A-209ENST00000550872 LIPT2A6NK58 231 aa14.49□□□□□ -0.09
CHMP1A-209ENST00000550872 SMAD9O15198 467 aaKnown RBP14.49□□□□□ -0.09
CHMP1A-209ENST00000550872 EIF1BO60739 113 aaKnown RBP14.49□□□□□ -0.09
CHMP1A-209ENST00000550872 DNAJC8O75937 253 aaPredicted RBP14.49□□□□□ -0.09
CHMP1A-209ENST00000550872 OR5F1O95221 314 aa14.49□□□□□ -0.09
CHMP1A-209ENST00000550872 LYPD3O95274 346 aa14.49□□□□□ -0.09
CHMP1A-209ENST00000550872 STAMBPO95630 424 aa14.49□□□□□ -0.09
CHMP1A-209ENST00000550872 PTNP21246 168 aa14.49□□□□□ -0.09
CHMP1A-209ENST00000550872 RPS5P46782 204 aaKnown RBP14.49□□□□□ -0.09
CHMP1A-209ENST00000550872 CTBP2P56545 445 aa14.49□□□□□ -0.09
CHMP1A-209ENST00000550872 RNPS1Q15287 305 aaKnown RBP14.49□□□□□ -0.09
CHMP1A-209ENST00000550872 SLC25A35Q3KQZ1 300 aa14.49□□□□□ -0.09
CHMP1A-209ENST00000550872 EEF1A1P5Q5VTE0 462 aa14.49□□□□□ -0.09
CHMP1A-209ENST00000550872 C5orf46Q6UWT4 87 aa14.49□□□□□ -0.09
CHMP1A-209ENST00000550872 LINC00114Q6XXX2 140 aa14.49□□□□□ -0.09
CHMP1A-209ENST00000550872 DHFR2Q86XF0 187 aa14.49□□□□□ -0.09
CHMP1A-209ENST00000550872 FAM86B1Q8N7N1 296 aa14.49□□□□□ -0.09
CHMP1A-209ENST00000550872 ABHD3Q8WU67 409 aa14.49□□□□□ -0.09
CHMP1A-209ENST00000550872 GMPPAQ96IJ6 420 aaPredicted RBP14.49□□□□□ -0.09
CHMP1A-209ENST00000550872 MPP4Q96JB8 637 aa14.49□□□□□ -0.09
CHMP1A-209ENST00000550872 PRRC1Q96M27 445 aa14.49□□□□□ -0.09
CHMP1A-209ENST00000550872 EPYCQ99645 322 aa14.49□□□□□ -0.09
CHMP1A-209ENST00000550872 NAA11Q9BSU3 229 aaPredicted RBP14.49□□□□□ -0.09
CHMP1A-209ENST00000550872 KCNJ16Q9NPI9 418 aa14.49□□□□□ -0.09
CHMP1A-209ENST00000550872 UTP20O75691 2785 aaKnown RBP14.49□□□□□ -0.09
CHMP1A-209ENST00000550872 NOTCH2Q04721 2471 aa14.49□□□□□ -0.09
CHMP1A-209ENST00000550872 TRAV36DV7A0A075B6V5 113 aa14.48□□□□□ -0.09
CHMP1A-209ENST00000550872 NKX2-6A6NCS4 301 aa14.48□□□□□ -0.09
CHMP1A-209ENST00000550872 GSC2O15499 205 aa14.48□□□□□ -0.09
CHMP1A-209ENST00000550872 OR2T1O43869 369 aa14.48□□□□□ -0.09
CHMP1A-209ENST00000550872 CYTIPO60759 359 aa14.48□□□□□ -0.09
CHMP1A-209ENST00000550872 TNFSF13O75888 250 aa14.48□□□□□ -0.09
CHMP1A-209ENST00000550872 ATP6V1B2P21281 511 aa14.48□□□□□ -0.09
CHMP1A-209ENST00000550872 KIR2DL2P43627 348 aaPredicted RBP14.48□□□□□ -0.09
CHMP1A-209ENST00000550872 RASGEF1BQ0VAM2 473 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms