RNA–Protein interactions for RNA: ENST00000550376.5

PRDM4-205, Transcript of PR/SET domain 4, humanhuman

TSL 1 (best)

Gene PRDM4, Length 2,591 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4-205ENST00000550376 UFD1Q92890 307 aa19.09■□□□□ 0.65
PRDM4-205ENST00000550376 TSSK2Q96PF2 358 aa19.09■□□□□ 0.65
PRDM4-205ENST00000550376 ALG8Q9BVK2 526 aa19.09■□□□□ 0.65
PRDM4-205ENST00000550376 NUAK2Q9H093 628 aa19.09■□□□□ 0.65
PRDM4-205ENST00000550376 IGLV3-12A0A075B6K2 115 aa19.09■□□□□ 0.65
PRDM4-205ENST00000550376 SLC35F4A4IF30 521 aa19.09■□□□□ 0.65
PRDM4-205ENST00000550376 NAA10P41227 235 aaPredicted RBP19.09■□□□□ 0.65
PRDM4-205ENST00000550376 DCAF7P61962 342 aa19.09■□□□□ 0.65
PRDM4-205ENST00000550376 ZSWIM7Q19AV6 140 aa19.09■□□□□ 0.65
PRDM4-205ENST00000550376 ZNF385CQ66K41 422 aaPredicted RBP19.09■□□□□ 0.65
PRDM4-205ENST00000550376 RPTNQ6XPR3 784 aa19.09■□□□□ 0.65
PRDM4-205ENST00000550376 ZNF440Q8IYI8 595 aa19.09■□□□□ 0.65
PRDM4-205ENST00000550376 NFAM1Q8NET5 270 aaPredicted RBP19.09■□□□□ 0.65
PRDM4-205ENST00000550376 TAAR8Q969N4 342 aa19.09■□□□□ 0.65
PRDM4-205ENST00000550376 ZC3H10Q96K80 434 aaKnown RBP19.09■□□□□ 0.65
PRDM4-205ENST00000550376 EVA1AQ9H8M9 152 aa19.09■□□□□ 0.65
PRDM4-205ENST00000550376 NANSQ9NR45 359 aa19.09■□□□□ 0.65
PRDM4-205ENST00000550376 ASB6Q9NWX5 421 aa19.09■□□□□ 0.65
PRDM4-205ENST00000550376 CAB39Q9Y376 341 aaPredicted RBP19.09■□□□□ 0.65
PRDM4-205ENST00000550376 NUP210LQ5VU65 1888 aa19.08■□□□□ 0.65
PRDM4-205ENST00000550376 B4DXG7 233 aa19.08■□□□□ 0.65
PRDM4-205ENST00000550376 SLC2A5P22732 501 aa19.08■□□□□ 0.65
PRDM4-205ENST00000550376 SDC2P34741 201 aa19.08■□□□□ 0.65
PRDM4-205ENST00000550376 CLDN6P56747 220 aa19.08■□□□□ 0.65
PRDM4-205ENST00000550376 KHDRBS1Q07666 443 aaKnown RBP eCLIP19.08■□□□□ 0.65
PRDM4-205ENST00000550376 ZNF74Q16587 644 aa19.08■□□□□ 0.65
PRDM4-205ENST00000550376 PSD4Q8NDX1 1056 aa19.08■□□□□ 0.65
PRDM4-205ENST00000550376 Q96M85 177 aa19.08■□□□□ 0.65
PRDM4-205ENST00000550376 SPSB2Q99619 263 aa19.08■□□□□ 0.65
PRDM4-205ENST00000550376 WDR77Q9BQA1 342 aaPredicted RBP19.08■□□□□ 0.65
PRDM4-205ENST00000550376 CRB3Q9BUF7 120 aa19.08■□□□□ 0.65
PRDM4-205ENST00000550376 ADGRL4Q9HBW9 690 aa19.08■□□□□ 0.65
PRDM4-205ENST00000550376 ZNF337Q9Y3M9 751 aa19.08■□□□□ 0.65
PRDM4-205ENST00000550376 TRBV11-1A0A0K0K1C0 115 aa19.08■□□□□ 0.64
PRDM4-205ENST00000550376 OR6C68A6NDL8 312 aa19.08■□□□□ 0.64
PRDM4-205ENST00000550376 EVI2BP34910 448 aa19.08■□□□□ 0.64
PRDM4-205ENST00000550376 TPBGQ13641 420 aa19.08■□□□□ 0.64
PRDM4-205ENST00000550376 SMPDL3BQ92485 455 aa19.08■□□□□ 0.64
PRDM4-205ENST00000550376 DTNBP1Q96EV8 351 aa19.08■□□□□ 0.64
PRDM4-205ENST00000550376 DACH2Q96NX9 599 aa19.08■□□□□ 0.64
PRDM4-205ENST00000550376 LAT2Q9GZY6 243 aa19.08■□□□□ 0.64
PRDM4-205ENST00000550376 NPFFR2Q9Y5X5 522 aa19.08■□□□□ 0.64
PRDM4-205ENST00000550376 CD8B2A6NJW9 211 aa19.07■□□□□ 0.64
PRDM4-205ENST00000550376 D6RAR5 112 aa19.07■□□□□ 0.64
PRDM4-205ENST00000550376 ZNF670-ZNF695F2Z2N8 137 aa19.07■□□□□ 0.64
PRDM4-205ENST00000550376 H7C1C5 153 aa19.07■□□□□ 0.64
PRDM4-205ENST00000550376 CD8BP10966 210 aa19.07■□□□□ 0.64
PRDM4-205ENST00000550376 TCEA1P23193 301 aaKnown RBP19.07■□□□□ 0.64
PRDM4-205ENST00000550376 GRK6P43250 576 aa19.07■□□□□ 0.64
PRDM4-205ENST00000550376 LCN6P62502 163 aa19.07■□□□□ 0.64
PRDM4-205ENST00000550376 TMEM44Q2T9K0 475 aa19.07■□□□□ 0.64
PRDM4-205ENST00000550376 VASNQ6EMK4 673 aa19.07■□□□□ 0.64
PRDM4-205ENST00000550376 DTWD2Q8NBA8 298 aa19.07■□□□□ 0.64
PRDM4-205ENST00000550376 SLC25A36Q96CQ1 311 aa19.07■□□□□ 0.64
PRDM4-205ENST00000550376 WDR12Q9GZL7 423 aaKnown RBP19.07■□□□□ 0.64
PRDM4-205ENST00000550376 ARRDC1-AS1Q9H2J1 176 aa19.07■□□□□ 0.64
PRDM4-205ENST00000550376 MED12Q93074 2177 aa19.07■□□□□ 0.64
PRDM4-205ENST00000550376 TEX13CA0A0J9YWL9 993 aa19.07■□□□□ 0.64
PRDM4-205ENST00000550376 A0A1W2PQL4 384 aaPredicted RBP19.07■□□□□ 0.64
PRDM4-205ENST00000550376 TMEM200CA6NKL6 621 aa19.07■□□□□ 0.64
PRDM4-205ENST00000550376 ALG1L2C9J202 215 aa19.07■□□□□ 0.64
PRDM4-205ENST00000550376 TO15178 435 aa19.07■□□□□ 0.64
PRDM4-205ENST00000550376 RGS5O15539 181 aa19.07■□□□□ 0.64
PRDM4-205ENST00000550376 SBK2P0C263 348 aa19.07■□□□□ 0.64
PRDM4-205ENST00000550376 ARHGAP11AQ6P4F7 1023 aa19.07■□□□□ 0.64
PRDM4-205ENST00000550376 CENPSQ8N2Z9 138 aa19.07■□□□□ 0.64
PRDM4-205ENST00000550376 S100ZQ8WXG8 99 aa19.07■□□□□ 0.64
PRDM4-205ENST00000550376 MMP25Q9NPA2 562 aa19.07■□□□□ 0.64
PRDM4-205ENST00000550376 CNTRLQ7Z7A1 2325 aa19.06■□□□□ 0.64
PRDM4-205ENST00000550376 J3QLW9 94 aa19.06■□□□□ 0.64
PRDM4-205ENST00000550376 MASP2O00187 686 aa19.06■□□□□ 0.64
PRDM4-205ENST00000550376 FADS1O60427 444 aa19.06■□□□□ 0.64
PRDM4-205ENST00000550376 PNMTP11086 282 aa19.06■□□□□ 0.64
PRDM4-205ENST00000550376 ZNF19P17023 458 aa19.06■□□□□ 0.64
PRDM4-205ENST00000550376 GTF2E2P29084 291 aaKnown RBP19.06■□□□□ 0.64
PRDM4-205ENST00000550376 SOX6P35712 828 aa19.06■□□□□ 0.64
PRDM4-205ENST00000550376 OR12D2P58182 307 aa19.06■□□□□ 0.64
PRDM4-205ENST00000550376 PEAR1Q5VY43 1037 aaPredicted RBP19.06■□□□□ 0.64
PRDM4-205ENST00000550376 OTPQ5XKR4 325 aa19.06■□□□□ 0.64
PRDM4-205ENST00000550376 ATP6V1C2Q8NEY4 427 aa19.06■□□□□ 0.64
PRDM4-205ENST00000550376 LPAR4Q99677 370 aa19.06■□□□□ 0.64
PRDM4-205ENST00000550376 NXF2Q9GZY0 626 aaKnown RBP19.06■□□□□ 0.64
PRDM4-205ENST00000550376 EXOSC3Q9NQT5 275 aaKnown RBP19.06■□□□□ 0.64
PRDM4-205ENST00000550376 GALNT8Q9NY28 637 aa19.06■□□□□ 0.64
PRDM4-205ENST00000550376 CCDC59Q9P031 241 aaKnown RBP19.06■□□□□ 0.64
PRDM4-205ENST00000550376 SAGE2PA6NJ88 616 aa19.06■□□□□ 0.64
PRDM4-205ENST00000550376 SLC22A31A6NKX4 558 aa19.06■□□□□ 0.64
PRDM4-205ENST00000550376 PPM1BO75688 479 aa19.06■□□□□ 0.64
PRDM4-205ENST00000550376 CER1O95813 267 aa19.06■□□□□ 0.64
PRDM4-205ENST00000550376 GRPRP30550 384 aa19.06■□□□□ 0.64
PRDM4-205ENST00000550376 CDKN2AP42771 156 aaKnown RBP19.06■□□□□ 0.64
PRDM4-205ENST00000550376 PNLIPRP2P54317 469 aa19.06■□□□□ 0.64
PRDM4-205ENST00000550376 DNASE1L3Q13609 305 aa19.06■□□□□ 0.64
PRDM4-205ENST00000550376 NPEPL1Q8NDH3 523 aa19.06■□□□□ 0.64
PRDM4-205ENST00000550376 OR6K6Q8NGW6 343 aa19.06■□□□□ 0.64
PRDM4-205ENST00000550376 SMAD5Q99717 465 aaKnown RBP19.06■□□□□ 0.64
PRDM4-205ENST00000550376 OR11A1Q9GZK7 315 aa19.06■□□□□ 0.64
PRDM4-205ENST00000550376 NRIP3Q9NQ35 241 aa19.06■□□□□ 0.64
PRDM4-205ENST00000550376 ABCB10Q9NRK6 738 aa19.06■□□□□ 0.64
PRDM4-205ENST00000550376 GRIP1Q9Y3R0 1128 aa19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms