RNA–Protein interactions for RNA: ENST00000549891.5

TROAP-211, Transcript of trophinin associated protein, humanhuman

TSL 1 (best)

Gene TROAP, Length 932 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-211ENST00000549891 LOC100289279A0A1B0GTE1 492 aa11.87□□□□□ -0.51
TROAP-211ENST00000549891 CPSF4O95639 269 aaKnown RBP11.87□□□□□ -0.51
TROAP-211ENST00000549891 C8BP07358 591 aa11.87□□□□□ -0.51
TROAP-211ENST00000549891 BPGMP07738 259 aa11.87□□□□□ -0.51
TROAP-211ENST00000549891 SLC1A3P43003 542 aa11.87□□□□□ -0.51
TROAP-211ENST00000549891 NR4A2P43354 598 aa11.87□□□□□ -0.51
TROAP-211ENST00000549891 TXNL4AP83876 142 aaKnown RBP11.87□□□□□ -0.51
TROAP-211ENST00000549891 IFFO1Q0D2I5 559 aa11.87□□□□□ -0.51
TROAP-211ENST00000549891 GGTLC2Q14390 218 aa11.87□□□□□ -0.51
TROAP-211ENST00000549891 SWI5Q1ZZU3 235 aa11.87□□□□□ -0.51
TROAP-211ENST00000549891 OTUD3Q5T2D3 398 aaPredicted RBP11.87□□□□□ -0.51
TROAP-211ENST00000549891 TSPO2Q5TGU0 170 aa11.87□□□□□ -0.51
TROAP-211ENST00000549891 ANKRD46Q86W74 232 aa11.87□□□□□ -0.51
TROAP-211ENST00000549891 TRIML2Q8N7C3 387 aa11.87□□□□□ -0.51
TROAP-211ENST00000549891 ZNF540Q8NDQ6 660 aa11.87□□□□□ -0.51
TROAP-211ENST00000549891 TESCQ96BS2 214 aa11.87□□□□□ -0.51
TROAP-211ENST00000549891 FBXO17Q96EF6 278 aa11.87□□□□□ -0.51
TROAP-211ENST00000549891 BOD1Q96IK1 185 aa11.87□□□□□ -0.51
TROAP-211ENST00000549891 SLC35A5Q9BS91 424 aa11.87□□□□□ -0.51
TROAP-211ENST00000549891 SF3B5Q9BWJ5 86 aaKnown RBP11.87□□□□□ -0.51
TROAP-211ENST00000549891 PIF1Q9H611 641 aa11.87□□□□□ -0.51
TROAP-211ENST00000549891 MARCOQ9UEW3 520 aaPredicted RBP11.87□□□□□ -0.51
TROAP-211ENST00000549891 LGALS13Q9UHV8 139 aa11.87□□□□□ -0.51
TROAP-211ENST00000549891 OSGIN1Q9UJX0 560 aa11.87□□□□□ -0.51
TROAP-211ENST00000549891 FBXO9Q9UK97 447 aaPredicted RBP11.87□□□□□ -0.51
TROAP-211ENST00000549891 PRDM4Q9UKN5 801 aa11.87□□□□□ -0.51
TROAP-211ENST00000549891 MOKQ9UQ07 419 aa11.87□□□□□ -0.51
TROAP-211ENST00000549891 SVEP1Q4LDE5 3571 aa11.87□□□□□ -0.51
TROAP-211ENST00000549891 LOC390937A0A1W2PQ73 354 aa11.86□□□□□ -0.51
TROAP-211ENST00000549891 TMEM72A0PK05 275 aa11.86□□□□□ -0.51
TROAP-211ENST00000549891 CLDN24A6NM45 220 aa11.86□□□□□ -0.51
TROAP-211ENST00000549891 VWC2LB2RUY7 222 aa11.86□□□□□ -0.51
TROAP-211ENST00000549891 HAX1O00165 279 aa11.86□□□□□ -0.51
TROAP-211ENST00000549891 FAAHO00519 579 aa11.86□□□□□ -0.51
TROAP-211ENST00000549891 SCN2BO60939 215 aa11.86□□□□□ -0.51
TROAP-211ENST00000549891 KRT33AO76009 404 aa11.86□□□□□ -0.51
TROAP-211ENST00000549891 LY6HO94772 140 aa11.86□□□□□ -0.51
TROAP-211ENST00000549891 GPIP06744 558 aa11.86□□□□□ -0.51
TROAP-211ENST00000549891 IMPDH2P12268 514 aa11.86□□□□□ -0.51
TROAP-211ENST00000549891 APEHP13798 732 aaKnown RBP11.86□□□□□ -0.51
TROAP-211ENST00000549891 IL7RP16871 459 aa11.86□□□□□ -0.51
TROAP-211ENST00000549891 CDH2P19022 906 aaPredicted RBP11.86□□□□□ -0.51
TROAP-211ENST00000549891 IGFBP5P24593 272 aa11.86□□□□□ -0.51
TROAP-211ENST00000549891 TACR3P29371 465 aa11.86□□□□□ -0.51
TROAP-211ENST00000549891 CLNS1AP54105 237 aaKnown RBP11.86□□□□□ -0.51
TROAP-211ENST00000549891 SLC25A3Q00325 362 aa11.86□□□□□ -0.51
TROAP-211ENST00000549891 FUT5Q11128 374 aa11.86□□□□□ -0.51
TROAP-211ENST00000549891 PDCD2Q16342 344 aaPredicted RBP11.86□□□□□ -0.51
TROAP-211ENST00000549891 FAM120AOSQ5T036 256 aa11.86□□□□□ -0.51
TROAP-211ENST00000549891 AAED1Q7RTV5 226 aa11.86□□□□□ -0.51
TROAP-211ENST00000549891 SLC46A3Q7Z3Q1 461 aa11.86□□□□□ -0.51
TROAP-211ENST00000549891 KIRREL3Q8IZU9 778 aa11.86□□□□□ -0.51
TROAP-211ENST00000549891 CNOT9Q92600 299 aaKnown RBP11.86□□□□□ -0.51
TROAP-211ENST00000549891 ZG16BQ96DA0 208 aa11.86□□□□□ -0.51
TROAP-211ENST00000549891 TRNT1Q96Q11 434 aaKnown RBP11.86□□□□□ -0.51
TROAP-211ENST00000549891 C19orf24Q9BVV8 132 aa11.86□□□□□ -0.51
TROAP-211ENST00000549891 AKTIPQ9H8T0 292 aa11.86□□□□□ -0.51
TROAP-211ENST00000549891 CHODLQ9H9P2 273 aa11.86□□□□□ -0.51
TROAP-211ENST00000549891 MOV10Q9HCE1 1003 aaKnown RBP11.86□□□□□ -0.51
TROAP-211ENST00000549891 TMEM45AQ9NWC5 275 aa11.86□□□□□ -0.51
TROAP-211ENST00000549891 ANK2Q01484 3957 aa11.85□□□□□ -0.51
TROAP-211ENST00000549891 CFAP73A6NFT4 308 aa11.85□□□□□ -0.51
TROAP-211ENST00000549891 AGAP5A6NIR3 686 aa11.85□□□□□ -0.51
TROAP-211ENST00000549891 OR6C65A6NJZ3 312 aa11.85□□□□□ -0.51
TROAP-211ENST00000549891 HMGN4O00479 90 aa11.85□□□□□ -0.51
TROAP-211ENST00000549891 AP3D1O14617 1153 aa11.85□□□□□ -0.51
TROAP-211ENST00000549891 PDE5AO76074 875 aa11.85□□□□□ -0.51
TROAP-211ENST00000549891 SNUPNO95149 360 aaKnown RBP11.85□□□□□ -0.51
TROAP-211ENST00000549891 CRYAAP02489 173 aa11.85□□□□□ -0.51
TROAP-211ENST00000549891 MYZAPP0CAP1 466 aa11.85□□□□□ -0.51
TROAP-211ENST00000549891 CXCR1P25024 350 aa11.85□□□□□ -0.51
TROAP-211ENST00000549891 SERPINF1P36955 418 aa11.85□□□□□ -0.51
TROAP-211ENST00000549891 SQLEQ14534 574 aa11.85□□□□□ -0.51
TROAP-211ENST00000549891 CASP8Q14790 479 aa11.85□□□□□ -0.51
TROAP-211ENST00000549891 GSTA3Q16772 222 aa11.85□□□□□ -0.51
TROAP-211ENST00000549891 MST1LQ2TV78 715 aa11.85□□□□□ -0.51
TROAP-211ENST00000549891 IQCCQ4KMZ1 466 aa11.85□□□□□ -0.51
TROAP-211ENST00000549891 LIPNQ5VXI9 398 aa11.85□□□□□ -0.51
TROAP-211ENST00000549891 HMGN2P46Q86SG4 172 aa11.85□□□□□ -0.51
TROAP-211ENST00000549891 GPAT4Q86UL3 456 aa11.85□□□□□ -0.51
TROAP-211ENST00000549891 NUDCD3Q8IVD9 361 aa11.85□□□□□ -0.51
TROAP-211ENST00000549891 ZNF440Q8IYI8 595 aa11.85□□□□□ -0.51
TROAP-211ENST00000549891 LRRC34Q8IZ02 419 aa11.85□□□□□ -0.51
TROAP-211ENST00000549891 ARIH2OSQ8N7S6 290 aa11.85□□□□□ -0.51
TROAP-211ENST00000549891 OR9K2Q8NGE7 335 aa11.85□□□□□ -0.51
TROAP-211ENST00000549891 WDR60Q8WVS4 1066 aa11.85□□□□□ -0.51
TROAP-211ENST00000549891 MSI2Q96DH6 328 aaKnown RBP11.85□□□□□ -0.51
TROAP-211ENST00000549891 PPP1R36Q96LQ0 422 aa11.85□□□□□ -0.51
TROAP-211ENST00000549891 SORCS2Q96PQ0 1159 aa11.85□□□□□ -0.51
TROAP-211ENST00000549891 ZNF317Q96PQ6 595 aaPredicted RBP11.85□□□□□ -0.51
TROAP-211ENST00000549891 SLC38A2Q96QD8 506 aa11.85□□□□□ -0.51
TROAP-211ENST00000549891 VRK1Q99986 396 aaPredicted RBP11.85□□□□□ -0.51
TROAP-211ENST00000549891 KATNB1Q9BVA0 655 aa11.85□□□□□ -0.51
TROAP-211ENST00000549891 TAPBPLQ9BX59 468 aa11.85□□□□□ -0.51
TROAP-211ENST00000549891 ROPN1BQ9BZX4 212 aaPredicted RBP11.85□□□□□ -0.51
TROAP-211ENST00000549891 MTHFD2LQ9H903 347 aaPredicted RBP11.85□□□□□ -0.51
TROAP-211ENST00000549891 ROPN1Q9HAT0 212 aaPredicted RBP11.85□□□□□ -0.51
TROAP-211ENST00000549891 B9A039 149 aa11.84□□□□□ -0.51
TROAP-211ENST00000549891 ZNF587BE7ETH6 402 aa11.84□□□□□ -0.51
TROAP-211ENST00000549891 E9PBE3 544 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms