RNA–Protein interactions for RNA: ENST00000547372.5

RBFOX1-208, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 5 BASIC

Gene RBFOX1, Length 3,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-208ENST00000547372 CCDC54Q8NEL0 328 aa11.06□□□□□ -0.64
RBFOX1-208ENST00000547372 OR4E2Q8NGC2 313 aa11.06□□□□□ -0.64
RBFOX1-208ENST00000547372 PIGXQ8TBF5 258 aa11.06□□□□□ -0.64
RBFOX1-208ENST00000547372 ST7LQ8TDW4 575 aa11.06□□□□□ -0.64
RBFOX1-208ENST00000547372 TGM7Q96PF1 710 aa11.06□□□□□ -0.64
RBFOX1-208ENST00000547372 BARX1Q9HBU1 254 aaPredicted RBP11.06□□□□□ -0.64
RBFOX1-208ENST00000547372 LSM7Q9UK45 103 aaKnown RBP11.06□□□□□ -0.64
RBFOX1-208ENST00000547372 SDK1Q7Z5N4 2213 aa11.06□□□□□ -0.64
RBFOX1-208ENST00000547372 FGBP02675 491 aa11.06□□□□□ -0.64
RBFOX1-208ENST00000547372 GYPBP06028 91 aa11.06□□□□□ -0.64
RBFOX1-208ENST00000547372 ARAFP10398 606 aa11.06□□□□□ -0.64
RBFOX1-208ENST00000547372 AVPR2P30518 371 aa11.06□□□□□ -0.64
RBFOX1-208ENST00000547372 OR1D2P34982 312 aa11.06□□□□□ -0.64
RBFOX1-208ENST00000547372 DHODHQ02127 395 aa11.06□□□□□ -0.64
RBFOX1-208ENST00000547372 AIMP2Q13155 320 aaKnown RBP11.06□□□□□ -0.64
RBFOX1-208ENST00000547372 SYPL1Q16563 259 aa11.06□□□□□ -0.64
RBFOX1-208ENST00000547372 FAM98AQ8NCA5 519 aaKnown RBP11.06□□□□□ -0.64
RBFOX1-208ENST00000547372 OR10D4PQ8NGN7 298 aa11.06□□□□□ -0.64
RBFOX1-208ENST00000547372 BRIX1Q8TDN6 353 aaKnown RBP11.06□□□□□ -0.64
RBFOX1-208ENST00000547372 SPOCK3Q9BQ16 436 aa11.06□□□□□ -0.64
RBFOX1-208ENST00000547372 EDEM2Q9BV94 578 aa11.06□□□□□ -0.64
RBFOX1-208ENST00000547372 ZCCHC2Q9C0B9 1178 aaKnown RBP11.06□□□□□ -0.64
RBFOX1-208ENST00000547372 TSPAN10Q9H1Z9 355 aaPredicted RBP11.06□□□□□ -0.64
RBFOX1-208ENST00000547372 IL21RQ9HBE5 538 aa11.06□□□□□ -0.64
RBFOX1-208ENST00000547372 A0A0B4J2A0 478 aa11.05□□□□□ -0.64
RBFOX1-208ENST00000547372 A0A1W2PPH5 198 aa11.05□□□□□ -0.64
RBFOX1-208ENST00000547372 OR5H14A6NHG9 310 aa11.05□□□□□ -0.64
RBFOX1-208ENST00000547372 DBX1A6NMT0 343 aa11.05□□□□□ -0.64
RBFOX1-208ENST00000547372 MBP02144 154 aa11.05□□□□□ -0.64
RBFOX1-208ENST00000547372 INHAP05111 366 aa11.05□□□□□ -0.64
RBFOX1-208ENST00000547372 OR8U8P0C7N1 319 aa11.05□□□□□ -0.64
RBFOX1-208ENST00000547372 C8orf89P0DMQ9 161 aa11.05□□□□□ -0.64
RBFOX1-208ENST00000547372 CPN1P15169 458 aa11.05□□□□□ -0.64
RBFOX1-208ENST00000547372 HPGDP15428 266 aa11.05□□□□□ -0.64
RBFOX1-208ENST00000547372 CD22P20273 847 aa11.05□□□□□ -0.64
RBFOX1-208ENST00000547372 CD80P33681 288 aa11.05□□□□□ -0.64
RBFOX1-208ENST00000547372 PCBP3P57721 371 aaKnown RBP11.05□□□□□ -0.64
RBFOX1-208ENST00000547372 TAS2R60P59551 318 aa11.05□□□□□ -0.64
RBFOX1-208ENST00000547372 PYY3Q5JQD4 70 aa11.05□□□□□ -0.64
RBFOX1-208ENST00000547372 C6orf120Q7Z4R8 191 aa11.05□□□□□ -0.64
RBFOX1-208ENST00000547372 ARRDC1Q8N5I2 433 aa11.05□□□□□ -0.64
RBFOX1-208ENST00000547372 INO80EQ8NBZ0 244 aaPredicted RBP11.05□□□□□ -0.64
RBFOX1-208ENST00000547372 RGP1Q92546 391 aaPredicted RBP11.05□□□□□ -0.64
RBFOX1-208ENST00000547372 NDC1Q9BTX1 674 aa11.05□□□□□ -0.64
RBFOX1-208ENST00000547372 PARP12Q9H0J9 701 aaKnown RBP11.05□□□□□ -0.64
RBFOX1-208ENST00000547372 SHPKQ9UHJ6 478 aa11.05□□□□□ -0.64
RBFOX1-208ENST00000547372 SMAD6O43541 496 aaKnown RBP11.05□□□□□ -0.64
RBFOX1-208ENST00000547372 ST6GAL1P15907 406 aa11.05□□□□□ -0.64
RBFOX1-208ENST00000547372 PSMA3P25788 255 aa11.05□□□□□ -0.64
RBFOX1-208ENST00000547372 ILF3Q12906 894 aaKnown RBP eCLIP11.05□□□□□ -0.64
RBFOX1-208ENST00000547372 EXOSC6Q5RKV6 272 aaKnown RBP11.05□□□□□ -0.64
RBFOX1-208ENST00000547372 Q6ZVL8 140 aa11.05□□□□□ -0.64
RBFOX1-208ENST00000547372 SKA3Q8IX90 412 aa11.05□□□□□ -0.64
RBFOX1-208ENST00000547372 OR51L1Q8NGJ5 315 aa11.05□□□□□ -0.64
RBFOX1-208ENST00000547372 OR51S1Q8NGJ8 323 aa11.05□□□□□ -0.64
RBFOX1-208ENST00000547372 OR6T1Q8NGN1 323 aa11.05□□□□□ -0.64
RBFOX1-208ENST00000547372 EID2BQ96D98 161 aa11.05□□□□□ -0.64
RBFOX1-208ENST00000547372 MARS2Q96GW9 593 aaKnown RBP11.05□□□□□ -0.64
RBFOX1-208ENST00000547372 SPAG17Q6Q759 2223 aa11.05□□□□□ -0.64
RBFOX1-208ENST00000547372 PHYHO14832 338 aa11.05□□□□□ -0.64
RBFOX1-208ENST00000547372 F2P00734 622 aa11.05□□□□□ -0.64
RBFOX1-208ENST00000547372 ADH1AP07327 375 aa11.05□□□□□ -0.64
RBFOX1-208ENST00000547372 ATP1B2P14415 290 aaPredicted RBP11.05□□□□□ -0.64
RBFOX1-208ENST00000547372 SSR2P43308 183 aa11.05□□□□□ -0.64
RBFOX1-208ENST00000547372 NUBP1P53384 320 aa11.05□□□□□ -0.64
RBFOX1-208ENST00000547372 CDK5Q00535 292 aa11.05□□□□□ -0.64
RBFOX1-208ENST00000547372 RSU1Q15404 277 aa11.05□□□□□ -0.64
RBFOX1-208ENST00000547372 FNDC3BQ53EP0 1204 aaKnown RBP11.05□□□□□ -0.64
RBFOX1-208ENST00000547372 SLC25A30Q5SVS4 291 aa11.05□□□□□ -0.64
RBFOX1-208ENST00000547372 ADGRF1Q5T601 910 aa11.05□□□□□ -0.64
RBFOX1-208ENST00000547372 PIP5KL1Q5T9C9 394 aa11.05□□□□□ -0.64
RBFOX1-208ENST00000547372 PRSS55Q6UWB4 352 aaPredicted RBP11.05□□□□□ -0.64
RBFOX1-208ENST00000547372 CYB561A3Q8NBI2 242 aa11.05□□□□□ -0.64
RBFOX1-208ENST00000547372 UBAC2Q8NBM4 344 aa11.05□□□□□ -0.64
RBFOX1-208ENST00000547372 ZNF485Q8NCK3 441 aa11.05□□□□□ -0.64
RBFOX1-208ENST00000547372 SEMA6DQ8NFY4 1073 aa11.05□□□□□ -0.64
RBFOX1-208ENST00000547372 HIST1H2BAQ96A08 127 aa11.05□□□□□ -0.64
RBFOX1-208ENST00000547372 AKR1E2Q96JD6 320 aa11.05□□□□□ -0.64
RBFOX1-208ENST00000547372 SUSD3Q96L08 255 aa11.05□□□□□ -0.64
RBFOX1-208ENST00000547372 OR14A2Q96R54 314 aa11.05□□□□□ -0.64
RBFOX1-208ENST00000547372 CCDC86Q9H6F5 360 aaKnown RBP11.05□□□□□ -0.64
RBFOX1-208ENST00000547372 FKRPQ9H9S5 495 aa11.05□□□□□ -0.64
RBFOX1-208ENST00000547372 SEBOXQ9HB31 216 aaPredicted RBP11.05□□□□□ -0.64
RBFOX1-208ENST00000547372 FBXO4Q9UKT5 387 aa11.05□□□□□ -0.64
RBFOX1-208ENST00000547372 NOP16Q9Y3C1 178 aaKnown RBP11.05□□□□□ -0.64
RBFOX1-208ENST00000547372 ZSWIM8A7E2V4 1837 aa11.05□□□□□ -0.64
RBFOX1-208ENST00000547372 LOC285556D6RIA3 1793 aa11.04□□□□□ -0.64
RBFOX1-208ENST00000547372 DRGXA6NNA5 263 aa11.04□□□□□ -0.64
RBFOX1-208ENST00000547372 EEF1E1-BLOC1S5C9J1V9 151 aa11.04□□□□□ -0.64
RBFOX1-208ENST00000547372 NEDD8-MDP1E9PL57 170 aa11.04□□□□□ -0.64
RBFOX1-208ENST00000547372 NPIPB8E9PQR5 432 aa11.04□□□□□ -0.64
RBFOX1-208ENST00000547372 PCDH8O95206 1070 aa11.04□□□□□ -0.64
RBFOX1-208ENST00000547372 CERS1P27544 350 aa11.04□□□□□ -0.64
RBFOX1-208ENST00000547372 SNRPD1P62314 119 aaKnown RBP11.04□□□□□ -0.64
RBFOX1-208ENST00000547372 CBFBQ13951 182 aa11.04□□□□□ -0.64
RBFOX1-208ENST00000547372 TRAM1Q15629 374 aa11.04□□□□□ -0.64
RBFOX1-208ENST00000547372 TP53I3Q53FA7 332 aa11.04□□□□□ -0.64
RBFOX1-208ENST00000547372 PRPF38BQ5VTL8 546 aaKnown RBP11.04□□□□□ -0.64
RBFOX1-208ENST00000547372 OR10K2Q6IF99 312 aa11.04□□□□□ -0.64
RBFOX1-208ENST00000547372 TMEM220Q6QAJ8 160 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms