RNA–Protein interactions for RNA: ENST00000545432.5

RTN3-214, Transcript of reticulon 3, humanhuman

TSL 4

Gene RTN3, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-214ENST00000545432 C1orf229Q6ZS94 237 aaPredicted RBP12.73□□□□□ -0.37
RTN3-214ENST00000545432 ABHD12BQ7Z5M8 362 aaPredicted RBP12.73□□□□□ -0.37
RTN3-214ENST00000545432 CNPY4Q8N129 248 aa12.73□□□□□ -0.37
RTN3-214ENST00000545432 ZCCHC24Q8N2G6 241 aaKnown RBP12.73□□□□□ -0.37
RTN3-214ENST00000545432 OR7A2PQ8NGA2 310 aa12.73□□□□□ -0.37
RTN3-214ENST00000545432 MIPOL1Q8TD10 442 aa12.73□□□□□ -0.37
RTN3-214ENST00000545432 NAA11Q9BSU3 229 aaPredicted RBP12.73□□□□□ -0.37
RTN3-214ENST00000545432 NELFAQ9H3P2 528 aa12.73□□□□□ -0.37
RTN3-214ENST00000545432 TMEM45AQ9NWC5 275 aa12.73□□□□□ -0.37
RTN3-214ENST00000545432 HIF1ANQ9NWT6 349 aa12.73□□□□□ -0.37
RTN3-214ENST00000545432 SLC35A3Q9Y2D2 325 aa12.73□□□□□ -0.37
RTN3-214ENST00000545432 DNAJC15Q9Y5T4 150 aa12.73□□□□□ -0.37
RTN3-214ENST00000545432 PRKDCP78527 4128 aaKnown RBP12.72□□□□□ -0.37
RTN3-214ENST00000545432 hCG_2039718K7EN88 272 aa12.72□□□□□ -0.37
RTN3-214ENST00000545432 AZIN1O14977 448 aa12.72□□□□□ -0.37
RTN3-214ENST00000545432 CRCPO75575 148 aa12.72□□□□□ -0.37
RTN3-214ENST00000545432 CYP7B1O75881 506 aa12.72□□□□□ -0.37
RTN3-214ENST00000545432 PROCP04070 461 aa12.72□□□□□ -0.37
RTN3-214ENST00000545432 ERCC1P07992 297 aaPredicted RBP12.72□□□□□ -0.37
RTN3-214ENST00000545432 FGF4P08620 206 aa12.72□□□□□ -0.37
RTN3-214ENST00000545432 ABHD2P08910 425 aa12.72□□□□□ -0.37
RTN3-214ENST00000545432 NPR2P20594 1047 aa12.72□□□□□ -0.37
RTN3-214ENST00000545432 THBS4P35443 961 aa12.72□□□□□ -0.37
RTN3-214ENST00000545432 SLC1A3P43003 542 aa12.72□□□□□ -0.37
RTN3-214ENST00000545432 HTR3AP46098 478 aa12.72□□□□□ -0.37
RTN3-214ENST00000545432 EVX1P49640 407 aa12.72□□□□□ -0.37
RTN3-214ENST00000545432 RPL38P63173 70 aaKnown RBP12.72□□□□□ -0.37
RTN3-214ENST00000545432 UGT3A2Q3SY77 523 aa12.72□□□□□ -0.37
RTN3-214ENST00000545432 RIMKLAQ8IXN7 391 aa12.72□□□□□ -0.37
RTN3-214ENST00000545432 OR5D16Q8NGK9 328 aa12.72□□□□□ -0.37
RTN3-214ENST00000545432 CLDND2Q8NHS1 167 aa12.72□□□□□ -0.37
RTN3-214ENST00000545432 ANKRD27Q96NW4 1050 aa12.72□□□□□ -0.37
RTN3-214ENST00000545432 ZNF385AQ96PM9 386 aaKnown RBP12.72□□□□□ -0.37
RTN3-214ENST00000545432 JMJD8Q96S16 334 aa12.72□□□□□ -0.37
RTN3-214ENST00000545432 KCNS3Q9BQ31 491 aa12.72□□□□□ -0.37
RTN3-214ENST00000545432 POLE3Q9NRF9 147 aa12.72□□□□□ -0.37
RTN3-214ENST00000545432 OXSMQ9NWU1 459 aa12.72□□□□□ -0.37
RTN3-214ENST00000545432 PRDM4Q9UKN5 801 aa12.72□□□□□ -0.37
RTN3-214ENST00000545432 MKLN1Q9UL63 735 aa12.72□□□□□ -0.37
RTN3-214ENST00000545432 EXOC1LA0A1B0GW35 172 aa12.71□□□□□ -0.37
RTN3-214ENST00000545432 VSTM5A8MXK1 200 aa12.71□□□□□ -0.37
RTN3-214ENST00000545432 FAAHO00519 579 aa12.71□□□□□ -0.37
RTN3-214ENST00000545432 C6orf47O95873 294 aa12.71□□□□□ -0.37
RTN3-214ENST00000545432 TFP02787 698 aa12.71□□□□□ -0.37
RTN3-214ENST00000545432 MSMBP08118 114 aa12.71□□□□□ -0.37
RTN3-214ENST00000545432 MYL2P10916 166 aa12.71□□□□□ -0.37
RTN3-214ENST00000545432 HPCAL1P37235 193 aa12.71□□□□□ -0.37
RTN3-214ENST00000545432 P2RY4P51582 365 aa12.71□□□□□ -0.37
RTN3-214ENST00000545432 ADRM1Q16186 407 aa12.71□□□□□ -0.37
RTN3-214ENST00000545432 PDCD2Q16342 344 aaPredicted RBP12.71□□□□□ -0.37
RTN3-214ENST00000545432 SLC9B1Q4ZJI4 515 aa12.71□□□□□ -0.37
RTN3-214ENST00000545432 ELFN2Q5R3F8 820 aa12.71□□□□□ -0.37
RTN3-214ENST00000545432 LIPMQ5VYY2 423 aa12.71□□□□□ -0.37
RTN3-214ENST00000545432 ANKK1Q8NFD2 765 aa12.71□□□□□ -0.37
RTN3-214ENST00000545432 OR9K2Q8NGE7 335 aa12.71□□□□□ -0.37
RTN3-214ENST00000545432 ZNF563Q8TA94 476 aa12.71□□□□□ -0.37
RTN3-214ENST00000545432 AURKBQ96GD4 344 aaPredicted RBP12.71□□□□□ -0.37
RTN3-214ENST00000545432 FMO2Q99518 471 aa12.71□□□□□ -0.37
RTN3-214ENST00000545432 SEC61A2Q9H9S3 476 aa12.71□□□□□ -0.37
RTN3-214ENST00000545432 G6PC2Q9NQR9 355 aa12.71□□□□□ -0.37
RTN3-214ENST00000545432 OSGIN1Q9UJX0 560 aa12.71□□□□□ -0.37
RTN3-214ENST00000545432 USP22Q9UPT9 525 aa12.71□□□□□ -0.37
RTN3-214ENST00000545432 GRIP1Q9Y3R0 1128 aa12.71□□□□□ -0.37
RTN3-214ENST00000545432 A0A0G2JK05 382 aa12.7□□□□□ -0.38
RTN3-214ENST00000545432 OR6C65A6NJZ3 312 aa12.7□□□□□ -0.38
RTN3-214ENST00000545432 TMEM229AB2RXF0 380 aa12.7□□□□□ -0.38
RTN3-214ENST00000545432 TMEM114B3SHH9 223 aa12.7□□□□□ -0.38
RTN3-214ENST00000545432 LYNX1G3V0Z9 82 aa12.7□□□□□ -0.38
RTN3-214ENST00000545432 RPL36A-HNRNPH2H7BZ11 118 aa12.7□□□□□ -0.38
RTN3-214ENST00000545432 LYPLA1O75608 230 aaPredicted RBP12.7□□□□□ -0.38
RTN3-214ENST00000545432 AVPP01185 164 aa12.7□□□□□ -0.38
RTN3-214ENST00000545432 LINC00032P0C843 101 aa12.7□□□□□ -0.38
RTN3-214ENST00000545432 LYNX1P0DP58 116 aa12.7□□□□□ -0.38
RTN3-214ENST00000545432 CBR1P16152 277 aa12.7□□□□□ -0.38
RTN3-214ENST00000545432 MATN1P21941 496 aa12.7□□□□□ -0.38
RTN3-214ENST00000545432 LMO4P61968 165 aa12.7□□□□□ -0.38
RTN3-214ENST00000545432 HBA1P69905 142 aa12.7□□□□□ -0.38
RTN3-214ENST00000545432 CCNIQ14094 377 aa12.7□□□□□ -0.38
RTN3-214ENST00000545432 KANK2Q63ZY3 851 aa12.7□□□□□ -0.38
RTN3-214ENST00000545432 TYW3Q6IPR3 259 aaKnown RBP12.7□□□□□ -0.38
RTN3-214ENST00000545432 C8orf74Q6P047 294 aa12.7□□□□□ -0.38
RTN3-214ENST00000545432 SHISA2Q6UWI4 295 aa12.7□□□□□ -0.38
RTN3-214ENST00000545432 LINGO2Q7L985 606 aa12.7□□□□□ -0.38
RTN3-214ENST00000545432 OLIG3Q7RTU3 272 aa12.7□□□□□ -0.38
RTN3-214ENST00000545432 AAED1Q7RTV5 226 aa12.7□□□□□ -0.38
RTN3-214ENST00000545432 C6orf120Q7Z4R8 191 aa12.7□□□□□ -0.38
RTN3-214ENST00000545432 SVOPLQ8N434 492 aa12.7□□□□□ -0.38
RTN3-214ENST00000545432 TEX29Q8N6K0 151 aa12.7□□□□□ -0.38
RTN3-214ENST00000545432 TMEM99Q8N816 258 aa12.7□□□□□ -0.38
RTN3-214ENST00000545432 DDIT4LQ96D03 193 aa12.7□□□□□ -0.38
RTN3-214ENST00000545432 ZG16BQ96DA0 208 aa12.7□□□□□ -0.38
RTN3-214ENST00000545432 DNAJA3Q96EY1 480 aa12.7□□□□□ -0.38
RTN3-214ENST00000545432 ATAD3AQ9NVI7 634 aa12.7□□□□□ -0.38
RTN3-214ENST00000545432 TMED7-TICAM2A0A0A6YYA0 188 aa12.69□□□□□ -0.38
RTN3-214ENST00000545432 IGHV2OR16-5A0A0B4J2B6 119 aa12.69□□□□□ -0.38
RTN3-214ENST00000545432 TMEM72A0PK05 275 aa12.69□□□□□ -0.38
RTN3-214ENST00000545432 LIPT2A6NK58 231 aa12.69□□□□□ -0.38
RTN3-214ENST00000545432 AQP7P3A6NL99 342 aa12.69□□□□□ -0.38
RTN3-214ENST00000545432 NR5A2O00482 541 aa12.69□□□□□ -0.38
RTN3-214ENST00000545432 PLIN3O60664 434 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms