RNA–Protein interactions for RNA: ENST00000545308.5

SNHG1-222, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 646 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-222ENST00000545308 MMP11P24347 488 aa3.26□□□□□ -1.89
SNHG1-222ENST00000545308 IGFBP5P24593 272 aa3.26□□□□□ -1.89
SNHG1-222ENST00000545308 OXTRP30559 389 aa3.26□□□□□ -1.89
SNHG1-222ENST00000545308 P2RY1P47900 373 aa3.26□□□□□ -1.89
SNHG1-222ENST00000545308 ARHGDIAP52565 204 aa3.26□□□□□ -1.89
SNHG1-222ENST00000545308 RPL8P62917 257 aaKnown RBP3.26□□□□□ -1.89
SNHG1-222ENST00000545308 ACY1Q03154 408 aa3.26□□□□□ -1.89
SNHG1-222ENST00000545308 CSTF1Q05048 431 aaKnown RBP3.26□□□□□ -1.89
SNHG1-222ENST00000545308 C1orf61Q13536 156 aa3.26□□□□□ -1.89
SNHG1-222ENST00000545308 DPYSL3Q14195 570 aa3.26□□□□□ -1.89
SNHG1-222ENST00000545308 SLC5A12Q1EHB4 618 aa3.26□□□□□ -1.89
SNHG1-222ENST00000545308 TIGITQ495A1 244 aa3.26□□□□□ -1.89
SNHG1-222ENST00000545308 SBK1Q52WX2 424 aa3.26□□□□□ -1.89
SNHG1-222ENST00000545308 C2CD6Q53TS8 623 aa3.26□□□□□ -1.89
SNHG1-222ENST00000545308 WSCD1Q658N2 575 aa3.26□□□□□ -1.89
SNHG1-222ENST00000545308 ZNF57Q68EA5 555 aaPredicted RBP3.26□□□□□ -1.89
SNHG1-222ENST00000545308 REP15Q6BDI9 236 aa3.26□□□□□ -1.89
SNHG1-222ENST00000545308 ARMCX5Q6P1M9 558 aa3.26□□□□□ -1.89
SNHG1-222ENST00000545308 SCYL2Q6P3W7 929 aa3.26□□□□□ -1.89
SNHG1-222ENST00000545308 EMBQ6PCB8 327 aa3.26□□□□□ -1.89
SNHG1-222ENST00000545308 Q6ZPB1 254 aaPredicted RBP3.26□□□□□ -1.89
SNHG1-222ENST00000545308 TAS2R42Q7RTR8 314 aa3.26□□□□□ -1.89
SNHG1-222ENST00000545308 CEACAM19Q7Z692 300 aa3.26□□□□□ -1.89
SNHG1-222ENST00000545308 CLEC4FQ8N1N0 589 aa3.26□□□□□ -1.89
SNHG1-222ENST00000545308 TMEM105Q8N8V8 129 aa3.26□□□□□ -1.89
SNHG1-222ENST00000545308 ZNF248Q8NDW4 579 aa3.26□□□□□ -1.89
SNHG1-222ENST00000545308 ZNF671Q8TAW3 534 aa3.26□□□□□ -1.89
SNHG1-222ENST00000545308 SDSLQ96GA7 329 aa3.26□□□□□ -1.89
SNHG1-222ENST00000545308 PIWIL1Q96J94 861 aaKnown RBP3.26□□□□□ -1.89
SNHG1-222ENST00000545308 SLC45A3Q96JT2 553 aa3.26□□□□□ -1.89
SNHG1-222ENST00000545308 C7orf34Q96L11 122 aa3.26□□□□□ -1.89
SNHG1-222ENST00000545308 ZNF597Q96LX8 424 aa3.26□□□□□ -1.89
SNHG1-222ENST00000545308 RIOK1Q9BRS2 568 aaKnown RBP3.26□□□□□ -1.89
SNHG1-222ENST00000545308 CHCHD5Q9BSY4 110 aa3.26□□□□□ -1.89
SNHG1-222ENST00000545308 DUSP16Q9BY84 665 aa3.26□□□□□ -1.89
SNHG1-222ENST00000545308 KRTAP4-4Q9BYR3 166 aa3.26□□□□□ -1.89
SNHG1-222ENST00000545308 ONECUT1Q9UBC0 465 aa3.26□□□□□ -1.89
SNHG1-222ENST00000545308 ZNF221Q9UK13 617 aa3.26□□□□□ -1.89
SNHG1-222ENST00000545308 ANGPTL2Q9UKU9 493 aa3.26□□□□□ -1.89
SNHG1-222ENST00000545308 CDH9Q9ULB4 789 aa3.26□□□□□ -1.89
SNHG1-222ENST00000545308 RPH3ALQ9UNE2 315 aa3.26□□□□□ -1.89
SNHG1-222ENST00000545308 RNF24Q9Y225 148 aa3.26□□□□□ -1.89
SNHG1-222ENST00000545308 NTNG1Q9Y2I2 539 aa3.26□□□□□ -1.89
SNHG1-222ENST00000545308 GVINP1Q7Z2Y8 2422 aa3.26□□□□□ -1.89
SNHG1-222ENST00000545308 MTCL1Q9Y4B5 1905 aaKnown RBP3.26□□□□□ -1.89
SNHG1-222ENST00000545308 COL4A6Q14031 1691 aa3.26□□□□□ -1.89
SNHG1-222ENST00000545308 CFAP47Q6ZTR5 3102 aa3.26□□□□□ -1.89
SNHG1-222ENST00000545308 FRMPD4Q14CM0 1322 aa3.25□□□□□ -1.89
SNHG1-222ENST00000545308 ATG2AQ2TAZ0 1938 aa3.25□□□□□ -1.89
SNHG1-222ENST00000545308 MAP1BP46821 2468 aaKnown RBP3.25□□□□□ -1.89
SNHG1-222ENST00000545308 A0A1W2PNV4 684 aa3.25□□□□□ -1.89
SNHG1-222ENST00000545308 ARHGEF35A5YM69 484 aa3.25□□□□□ -1.89
SNHG1-222ENST00000545308 TRABD2BA6NFA1 517 aa3.25□□□□□ -1.89
SNHG1-222ENST00000545308 HELTA6NFD8 242 aa3.25□□□□□ -1.89
SNHG1-222ENST00000545308 G3V4G9 280 aa3.25□□□□□ -1.89
SNHG1-222ENST00000545308 H0Y8G0 127 aa3.25□□□□□ -1.89
SNHG1-222ENST00000545308 M0QZ92 97 aa3.25□□□□□ -1.89
SNHG1-222ENST00000545308 LCMT2O60294 686 aaKnown RBP3.25□□□□□ -1.89
SNHG1-222ENST00000545308 TPST2O60704 377 aa3.25□□□□□ -1.89
SNHG1-222ENST00000545308 NDUFB10O96000 172 aa3.25□□□□□ -1.89
SNHG1-222ENST00000545308 ALPIP09923 528 aa3.25□□□□□ -1.89
SNHG1-222ENST00000545308 PNMTP11086 282 aa3.25□□□□□ -1.89
SNHG1-222ENST00000545308 UMPSP11172 480 aa3.25□□□□□ -1.89
SNHG1-222ENST00000545308 TOP1P11387 765 aaKnown RBP3.25□□□□□ -1.89
SNHG1-222ENST00000545308 PVRP15151 417 aa3.25□□□□□ -1.89
SNHG1-222ENST00000545308 ATP5A1P25705 553 aaKnown RBP3.25□□□□□ -1.89
SNHG1-222ENST00000545308 RDXP35241 583 aaKnown RBP3.25□□□□□ -1.89
SNHG1-222ENST00000545308 CAPGP40121 348 aa3.25□□□□□ -1.89
SNHG1-222ENST00000545308 OR1D4P47884 311 aa3.25□□□□□ -1.89
SNHG1-222ENST00000545308 TDO2P48775 406 aa3.25□□□□□ -1.89
SNHG1-222ENST00000545308 CEBPDP49716 269 aaPredicted RBP3.25□□□□□ -1.89
SNHG1-222ENST00000545308 AP3M2P53677 418 aa3.25□□□□□ -1.89
SNHG1-222ENST00000545308 LIM2P55344 173 aa3.25□□□□□ -1.89
SNHG1-222ENST00000545308 KRTAP10-12P60413 245 aa3.25□□□□□ -1.89
SNHG1-222ENST00000545308 BDH1Q02338 343 aa3.25□□□□□ -1.89
SNHG1-222ENST00000545308 OC90Q02509 493 aaPredicted RBP3.25□□□□□ -1.89
SNHG1-222ENST00000545308 GBE1Q04446 702 aa3.25□□□□□ -1.89
SNHG1-222ENST00000545308 FGL1Q08830 312 aa3.25□□□□□ -1.89
SNHG1-222ENST00000545308 COX10Q12887 443 aa3.25□□□□□ -1.89
SNHG1-222ENST00000545308 IL18R1Q13478 541 aa3.25□□□□□ -1.89
SNHG1-222ENST00000545308 PEX6Q13608 980 aa3.25□□□□□ -1.89
SNHG1-222ENST00000545308 CUL2Q13617 745 aa3.25□□□□□ -1.89
SNHG1-222ENST00000545308 CYLC2Q14093 348 aaPredicted RBP3.25□□□□□ -1.89
SNHG1-222ENST00000545308 GPNMBQ14956 572 aa3.25□□□□□ -1.89
SNHG1-222ENST00000545308 TMEM44Q2T9K0 475 aa3.25□□□□□ -1.89
SNHG1-222ENST00000545308 SERINC5Q86VE9 423 aa3.25□□□□□ -1.89
SNHG1-222ENST00000545308 CATSPER3Q86XQ3 398 aa3.25□□□□□ -1.89
SNHG1-222ENST00000545308 FBXO16Q8IX29 292 aaPredicted RBP3.25□□□□□ -1.89
SNHG1-222ENST00000545308 PHC2Q8IXK0 858 aa3.25□□□□□ -1.89
SNHG1-222ENST00000545308 C4orf32Q8N8J7 132 aa3.25□□□□□ -1.89
SNHG1-222ENST00000545308 AKR7LQ8NHP1 331 aa3.25□□□□□ -1.89
SNHG1-222ENST00000545308 PPTC7Q8NI37 304 aa3.25□□□□□ -1.89
SNHG1-222ENST00000545308 NPRL2Q8WTW4 380 aa3.25□□□□□ -1.89
SNHG1-222ENST00000545308 ZNF689Q96CS4 500 aaPredicted RBP3.25□□□□□ -1.89
SNHG1-222ENST00000545308 C18orf12Q96KH6 178 aa3.25□□□□□ -1.89
SNHG1-222ENST00000545308 OPRPNQ99935 248 aaPredicted RBP3.25□□□□□ -1.89
SNHG1-222ENST00000545308 ATF6BQ99941 703 aa3.25□□□□□ -1.89
SNHG1-222ENST00000545308 LRRN3Q9H3W5 708 aa3.25□□□□□ -1.89
SNHG1-222ENST00000545308 TUBB1Q9H4B7 451 aa3.25□□□□□ -1.89
SNHG1-222ENST00000545308 JPT2Q9H910 190 aa3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms