RNA–Protein interactions for RNA: ENST00000545170.5

ATXN3-216, Transcript of ataxin 3, humanhuman

TSL 5 BASIC

Gene ATXN3, Length 6,950 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-216ENST00000545170 SIDT1Q9NXL6 827 aaKnown RBP8.08□□□□□ -1.12
ATXN3-216ENST00000545170 LAMP3Q9UQV4 416 aa8.08□□□□□ -1.12
ATXN3-216ENST00000545170 NUMBLQ9Y6R0 609 aa8.08□□□□□ -1.12
ATXN3-216ENST00000545170 TULP4Q9NRJ4 1543 aa8.08□□□□□ -1.12
ATXN3-216ENST00000545170 B4DXG7 233 aa8.08□□□□□ -1.12
ATXN3-216ENST00000545170 J3KTA2 159 aa8.08□□□□□ -1.12
ATXN3-216ENST00000545170 AK1P00568 194 aa8.08□□□□□ -1.12
ATXN3-216ENST00000545170 SPP1P10451 314 aa8.08□□□□□ -1.12
ATXN3-216ENST00000545170 UBXN2BQ14CS0 331 aa8.08□□□□□ -1.12
ATXN3-216ENST00000545170 SERPINA11Q86U17 422 aa8.08□□□□□ -1.12
ATXN3-216ENST00000545170 VRK3Q8IV63 474 aa8.08□□□□□ -1.12
ATXN3-216ENST00000545170 KIAA1958Q8N8K9 716 aa8.08□□□□□ -1.12
ATXN3-216ENST00000545170 DUS2Q9NX74 493 aaKnown RBP8.08□□□□□ -1.12
ATXN3-216ENST00000545170 ZNF281Q9Y2X9 895 aa8.08□□□□□ -1.12
ATXN3-216ENST00000545170 NWD1Q149M9 1564 aa8.08□□□□□ -1.12
ATXN3-216ENST00000545170 ZNF727A8MUV8 499 aa8.08□□□□□ -1.12
ATXN3-216ENST00000545170 BMPR1BO00238 502 aa8.08□□□□□ -1.12
ATXN3-216ENST00000545170 TSPAN6O43657 245 aa8.08□□□□□ -1.12
ATXN3-216ENST00000545170 ACAA1P09110 424 aaPredicted RBP8.08□□□□□ -1.12
ATXN3-216ENST00000545170 ALDOCP09972 364 aaKnown RBP8.08□□□□□ -1.12
ATXN3-216ENST00000545170 BMPR1AP36894 532 aa8.08□□□□□ -1.12
ATXN3-216ENST00000545170 LIPAP38571 399 aa8.08□□□□□ -1.12
ATXN3-216ENST00000545170 PLGLB1Q02325 96 aa8.08□□□□□ -1.12
ATXN3-216ENST00000545170 PLGLAQ15195 96 aa8.08□□□□□ -1.12
ATXN3-216ENST00000545170 ARSIQ5FYB1 569 aa8.08□□□□□ -1.12
ATXN3-216ENST00000545170 MS4A13Q5J8X5 152 aa8.08□□□□□ -1.12
ATXN3-216ENST00000545170 CPZQ66K79 652 aa8.08□□□□□ -1.12
ATXN3-216ENST00000545170 ABHD12BQ7Z5M8 362 aaPredicted RBP8.08□□□□□ -1.12
ATXN3-216ENST00000545170 LINC00116Q8NCU8 138 aa8.08□□□□□ -1.12
ATXN3-216ENST00000545170 OR4F5Q8NH21 305 aa8.08□□□□□ -1.12
ATXN3-216ENST00000545170 DYNC2LI1Q8TCX1 351 aa8.08□□□□□ -1.12
ATXN3-216ENST00000545170 OR4F4Q96R69 305 aa8.08□□□□□ -1.12
ATXN3-216ENST00000545170 RNF167Q9H6Y7 350 aa8.08□□□□□ -1.12
ATXN3-216ENST00000545170 CAMK2AQ9UQM7 478 aa8.08□□□□□ -1.12
ATXN3-216ENST00000545170 SMIM28A0A1B0GU29 152 aa8.08□□□□□ -1.12
ATXN3-216ENST00000545170 SERTM2A0A1B0GWG4 89 aa8.08□□□□□ -1.12
ATXN3-216ENST00000545170 A6NLC8 198 aa8.08□□□□□ -1.12
ATXN3-216ENST00000545170 H7BY64 318 aa8.08□□□□□ -1.12
ATXN3-216ENST00000545170 MPPED1O15442 326 aa8.08□□□□□ -1.12
ATXN3-216ENST00000545170 SLC16A7O60669 478 aa8.08□□□□□ -1.12
ATXN3-216ENST00000545170 ACKR3P25106 362 aa8.08□□□□□ -1.12
ATXN3-216ENST00000545170 CLCNKAP51800 687 aa8.08□□□□□ -1.12
ATXN3-216ENST00000545170 PCBP4P57723 403 aaKnown RBP8.08□□□□□ -1.12
ATXN3-216ENST00000545170 ARL16Q0P5N6 197 aa8.08□□□□□ -1.12
ATXN3-216ENST00000545170 IAH1Q2TAA2 248 aaPredicted RBP8.08□□□□□ -1.12
ATXN3-216ENST00000545170 OR5B3Q8NH48 314 aa8.08□□□□□ -1.12
ATXN3-216ENST00000545170 TBC1D20Q96BZ9 403 aa8.08□□□□□ -1.12
ATXN3-216ENST00000545170 FBXL18Q96ME1 805 aa8.08□□□□□ -1.12
ATXN3-216ENST00000545170 OR5M11Q96RB7 305 aa8.08□□□□□ -1.12
ATXN3-216ENST00000545170 CMSS1Q9BQ75 279 aaKnown RBP8.08□□□□□ -1.12
ATXN3-216ENST00000545170 NXF5Q9H1B4 397 aaKnown RBP8.08□□□□□ -1.12
ATXN3-216ENST00000545170 FAM124BQ9H5Z6 455 aaPredicted RBP8.08□□□□□ -1.12
ATXN3-216ENST00000545170 SLC23A2Q9UGH3 650 aa8.08□□□□□ -1.12
ATXN3-216ENST00000545170 CORINQ9Y5Q5 1042 aa8.08□□□□□ -1.12
ATXN3-216ENST00000545170 TRAPPC1Q9Y5R8 145 aa8.08□□□□□ -1.12
ATXN3-216ENST00000545170 TAAR5O14804 337 aa8.07□□□□□ -1.12
ATXN3-216ENST00000545170 SIGLEC6O43699 453 aa8.07□□□□□ -1.12
ATXN3-216ENST00000545170 MGMTP16455 207 aa8.07□□□□□ -1.12
ATXN3-216ENST00000545170 CCKARP32238 428 aa8.07□□□□□ -1.12
ATXN3-216ENST00000545170 CRYBB1P53674 252 aaPredicted RBP8.07□□□□□ -1.12
ATXN3-216ENST00000545170 KDELC1Q6UW63 502 aa8.07□□□□□ -1.12
ATXN3-216ENST00000545170 NRIP3Q9NQ35 241 aa8.07□□□□□ -1.12
ATXN3-216ENST00000545170 STRAPQ9Y3F4 350 aaKnown RBP8.07□□□□□ -1.12
ATXN3-216ENST00000545170 IER3IP1Q9Y5U9 82 aa8.07□□□□□ -1.12
ATXN3-216ENST00000545170 SETBP1Q9Y6X0 1596 aa8.07□□□□□ -1.12
ATXN3-216ENST00000545170 KLRG2A4D1S0 409 aaPredicted RBP8.07□□□□□ -1.12
ATXN3-216ENST00000545170 C2orf72A6NCS6 295 aa8.07□□□□□ -1.12
ATXN3-216ENST00000545170 C1GALT1C1LP0DN25 315 aa8.07□□□□□ -1.12
ATXN3-216ENST00000545170 LAMP1P11279 417 aa8.07□□□□□ -1.12
ATXN3-216ENST00000545170 ITGB5P18084 799 aa8.07□□□□□ -1.12
ATXN3-216ENST00000545170 HMGCLP35914 325 aa8.07□□□□□ -1.12
ATXN3-216ENST00000545170 ACVRL1P37023 503 aa8.07□□□□□ -1.12
ATXN3-216ENST00000545170 HOXA1P49639 335 aaPredicted RBP8.07□□□□□ -1.12
ATXN3-216ENST00000545170 EMP2P54851 167 aa8.07□□□□□ -1.12
ATXN3-216ENST00000545170 CD300LGQ6UXG3 332 aa8.07□□□□□ -1.12
ATXN3-216ENST00000545170 GDPD4Q6W3E5 623 aa8.07□□□□□ -1.12
ATXN3-216ENST00000545170 FAM26EQ8N5C1 309 aa8.07□□□□□ -1.12
ATXN3-216ENST00000545170 LMNTD1Q8N9Z9 388 aa8.07□□□□□ -1.12
ATXN3-216ENST00000545170 OR9K2Q8NGE7 335 aa8.07□□□□□ -1.12
ATXN3-216ENST00000545170 IL1F10Q8WWZ1 152 aa8.07□□□□□ -1.12
ATXN3-216ENST00000545170 IGSF5Q9NSI5 407 aa8.07□□□□□ -1.12
ATXN3-216ENST00000545170 ANKRD66B4E2M5 251 aa8.07□□□□□ -1.12
ATXN3-216ENST00000545170 AP4M1O00189 453 aa8.07□□□□□ -1.12
ATXN3-216ENST00000545170 NUDT21O43809 227 aaKnown RBP8.07□□□□□ -1.12
ATXN3-216ENST00000545170 CCR9P51686 369 aa8.07□□□□□ -1.12
ATXN3-216ENST00000545170 ZNF91Q05481 1191 aa8.07□□□□□ -1.12
ATXN3-216ENST00000545170 CATSPERGQ6ZRH7 1159 aa8.07□□□□□ -1.12
ATXN3-216ENST00000545170 OVCH1Q7RTY7 1134 aa8.07□□□□□ -1.12
ATXN3-216ENST00000545170 ZDHHC14Q8IZN3 488 aa8.07□□□□□ -1.12
ATXN3-216ENST00000545170 PHYHIPLQ96FC7 376 aa8.07□□□□□ -1.12
ATXN3-216ENST00000545170 PGAP3Q96FM1 320 aaPredicted RBP8.07□□□□□ -1.12
ATXN3-216ENST00000545170 ZNF514Q96K75 400 aaPredicted RBP8.07□□□□□ -1.12
ATXN3-216ENST00000545170 TEPSINQ96N21 525 aa8.07□□□□□ -1.12
ATXN3-216ENST00000545170 PCED1AQ9H1Q7 454 aa8.07□□□□□ -1.12
ATXN3-216ENST00000545170 SUV39H2Q9H5I1 410 aa8.07□□□□□ -1.12
ATXN3-216ENST00000545170 RHOFQ9HBH0 211 aa8.07□□□□□ -1.12
ATXN3-216ENST00000545170 MYO10Q9HD67 2058 aa8.07□□□□□ -1.12
ATXN3-216ENST00000545170 A0A1W2PNV4 684 aa8.07□□□□□ -1.12
ATXN3-216ENST00000545170 A0A1W2PPQ1 181 aa8.07□□□□□ -1.12
ATXN3-216ENST00000545170 GABRB1P18505 474 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms