RNA–Protein interactions for RNA: ENST00000544910.5

VPS50-220, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2 BASIC

Gene VPS50, Length 5,736 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-220ENST00000544910 AK6Q9Y3D8 172 aaKnown RBP5.36□□□□□ -1.55
VPS50-220ENST00000544910 MYLKQ15746 1914 aa5.36□□□□□ -1.55
VPS50-220ENST00000544910 C13orf42A0A1B0GVH6 325 aa5.36□□□□□ -1.55
VPS50-220ENST00000544910 STMND1H3BQB6 276 aa5.36□□□□□ -1.55
VPS50-220ENST00000544910 HSPA12AO43301 675 aa5.36□□□□□ -1.55
VPS50-220ENST00000544910 SC5DO75845 299 aa5.36□□□□□ -1.55
VPS50-220ENST00000544910 ADH7P40394 386 aa5.36□□□□□ -1.55
VPS50-220ENST00000544910 S100A10P60903 97 aa5.36□□□□□ -1.55
VPS50-220ENST00000544910 RAB11BQ15907 218 aa5.36□□□□□ -1.55
VPS50-220ENST00000544910 TATDN3Q17R31 274 aa5.36□□□□□ -1.55
VPS50-220ENST00000544910 ZNF800Q2TB10 664 aaPredicted RBP eCLIP5.36□□□□□ -1.55
VPS50-220ENST00000544910 SFXN4Q6P4A7 337 aa5.36□□□□□ -1.55
VPS50-220ENST00000544910 KCTD18Q6PI47 426 aaPredicted RBP5.36□□□□□ -1.55
VPS50-220ENST00000544910 WASH2PQ6VEQ5 465 aa5.36□□□□□ -1.55
VPS50-220ENST00000544910 GDPD3Q7L5L3 318 aa5.36□□□□□ -1.55
VPS50-220ENST00000544910 TMED4Q7Z7H5 227 aa5.36□□□□□ -1.55
VPS50-220ENST00000544910 CCDC190Q86UF4 302 aa5.36□□□□□ -1.55
VPS50-220ENST00000544910 JAGN1Q8N5M9 183 aa5.36□□□□□ -1.55
VPS50-220ENST00000544910 SYNPRQ8TBG9 265 aa5.36□□□□□ -1.55
VPS50-220ENST00000544910 ZNF578Q96N58 590 aaPredicted RBP5.36□□□□□ -1.55
VPS50-220ENST00000544910 GAL3ST1Q99999 423 aa5.36□□□□□ -1.55
VPS50-220ENST00000544910 OR10A4Q9H209 315 aa5.36□□□□□ -1.55
VPS50-220ENST00000544910 UBQLN3Q9H347 655 aa5.36□□□□□ -1.55
VPS50-220ENST00000544910 HHATLQ9HCP6 504 aa5.36□□□□□ -1.55
VPS50-220ENST00000544910 DAPP1Q9UN19 280 aa5.36□□□□□ -1.55
VPS50-220ENST00000544910 NOX1Q9Y5S8 564 aa5.36□□□□□ -1.55
VPS50-220ENST00000544910 FAM171A2A8MVW0 826 aa5.36□□□□□ -1.55
VPS50-220ENST00000544910 TLX3O43711 291 aaPredicted RBP5.36□□□□□ -1.55
VPS50-220ENST00000544910 PDGFAP04085 211 aa5.36□□□□□ -1.55
VPS50-220ENST00000544910 M6PRP20645 277 aa5.36□□□□□ -1.55
VPS50-220ENST00000544910 RIDAP52758 137 aaKnown RBP5.36□□□□□ -1.55
VPS50-220ENST00000544910 CDK5Q00535 292 aa5.36□□□□□ -1.55
VPS50-220ENST00000544910 BDH1Q02338 343 aa5.36□□□□□ -1.55
VPS50-220ENST00000544910 RASGEF1BQ0VAM2 473 aa5.36□□□□□ -1.55
VPS50-220ENST00000544910 CMIPQ8IY22 773 aa5.36□□□□□ -1.55
VPS50-220ENST00000544910 ABHD4Q8TB40 342 aa5.36□□□□□ -1.55
VPS50-220ENST00000544910 FAM174AQ8TBP5 190 aa5.36□□□□□ -1.55
VPS50-220ENST00000544910 PMM1Q92871 262 aa5.36□□□□□ -1.55
VPS50-220ENST00000544910 ZNF707Q96C28 371 aaPredicted RBP5.36□□□□□ -1.55
VPS50-220ENST00000544910 ZNF764Q96H86 408 aaPredicted RBP5.36□□□□□ -1.55
VPS50-220ENST00000544910 SHDQ96IW2 340 aa5.36□□□□□ -1.55
VPS50-220ENST00000544910 TNFRSF13CQ96RJ3 184 aa5.36□□□□□ -1.55
VPS50-220ENST00000544910 CMKLR1Q99788 373 aa5.36□□□□□ -1.55
VPS50-220ENST00000544910 SLC25A18Q9H1K4 315 aa5.36□□□□□ -1.55
VPS50-220ENST00000544910 ATG5Q9H1Y0 275 aa5.36□□□□□ -1.55
VPS50-220ENST00000544910 SIRT3Q9NTG7 399 aaPredicted RBP5.36□□□□□ -1.55
VPS50-220ENST00000544910 GFOD1Q9NXC2 390 aa5.36□□□□□ -1.55
VPS50-220ENST00000544910 B3GNT2Q9NY97 397 aa5.36□□□□□ -1.55
VPS50-220ENST00000544910 KCND3Q9UK17 655 aa5.36□□□□□ -1.55
VPS50-220ENST00000544910 SLC22A7Q9Y694 548 aa5.36□□□□□ -1.55
VPS50-220ENST00000544910 ZNF638Q14966 1978 aaKnown RBP5.36□□□□□ -1.55
VPS50-220ENST00000544910 CROCCQ5TZA2 2017 aa5.36□□□□□ -1.55
VPS50-220ENST00000544910 LOC100509620A0A075B734 347 aa5.36□□□□□ -1.55
VPS50-220ENST00000544910 A0A1W2PPL8 197 aa5.36□□□□□ -1.55
VPS50-220ENST00000544910 SOX1O00570 391 aaPredicted RBP5.36□□□□□ -1.55
VPS50-220ENST00000544910 TNFRSF10CO14798 259 aa5.36□□□□□ -1.55
VPS50-220ENST00000544910 SLC2A10O95528 541 aa5.36□□□□□ -1.55
VPS50-220ENST00000544910 C1QCP02747 245 aa5.36□□□□□ -1.55
VPS50-220ENST00000544910 GTF2F2P13984 249 aa5.36□□□□□ -1.55
VPS50-220ENST00000544910 MAT1AQ00266 395 aaKnown RBP5.36□□□□□ -1.55
VPS50-220ENST00000544910 MC2RQ01718 297 aa5.36□□□□□ -1.55
VPS50-220ENST00000544910 TRMT12Q53H54 448 aaKnown RBP5.36□□□□□ -1.55
VPS50-220ENST00000544910 KRBOX4Q5JUW0 171 aa5.36□□□□□ -1.55
VPS50-220ENST00000544910 NIPAL3Q6P499 406 aa5.36□□□□□ -1.55
VPS50-220ENST00000544910 ZNF793Q6ZN11 406 aa5.36□□□□□ -1.55
VPS50-220ENST00000544910 CA13Q8N1Q1 262 aa5.36□□□□□ -1.55
VPS50-220ENST00000544910 OR8S1Q8NH09 359 aa5.36□□□□□ -1.55
VPS50-220ENST00000544910 KLHL15Q96M94 604 aa5.36□□□□□ -1.55
VPS50-220ENST00000544910 OR2M2Q96R28 347 aa5.36□□□□□ -1.55
VPS50-220ENST00000544910 SDF2Q99470 211 aa5.36□□□□□ -1.55
VPS50-220ENST00000544910 ARHGAP9Q9BRR9 750 aa5.36□□□□□ -1.55
VPS50-220ENST00000544910 PRMT8Q9NR22 394 aaPredicted RBP5.36□□□□□ -1.55
VPS50-220ENST00000544910 CENPMQ9NSP4 180 aa5.36□□□□□ -1.55
VPS50-220ENST00000544910 GLTPQ9NZD2 209 aa5.36□□□□□ -1.55
VPS50-220ENST00000544910 A0A0G2JMP0 313 aa5.35□□□□□ -1.55
VPS50-220ENST00000544910 A0A1B0GWA3 101 aa5.35□□□□□ -1.55
VPS50-220ENST00000544910 TMEM221A6NGB7 291 aa5.35□□□□□ -1.55
VPS50-220ENST00000544910 SERINC4A6NH21 518 aa5.35□□□□□ -1.55
VPS50-220ENST00000544910 PEX12O00623 359 aa5.35□□□□□ -1.55
VPS50-220ENST00000544910 FZD7O75084 574 aa5.35□□□□□ -1.55
VPS50-220ENST00000544910 MOSPD3O75425 235 aa5.35□□□□□ -1.55
VPS50-220ENST00000544910 B3GALNT1O75752 331 aa5.35□□□□□ -1.55
VPS50-220ENST00000544910 TOXO94900 526 aa5.35□□□□□ -1.55
VPS50-220ENST00000544910 TFP02787 698 aa5.35□□□□□ -1.55
VPS50-220ENST00000544910 S1PR1P21453 382 aa5.35□□□□□ -1.55
VPS50-220ENST00000544910 FRKP42685 505 aaPredicted RBP5.35□□□□□ -1.55
VPS50-220ENST00000544910 PPP2CBP62714 309 aa5.35□□□□□ -1.55
VPS50-220ENST00000544910 PPP2CAP67775 309 aa5.35□□□□□ -1.55
VPS50-220ENST00000544910 CYCSP99999 105 aaKnown RBP5.35□□□□□ -1.55
VPS50-220ENST00000544910 TDGQ13569 410 aa5.35□□□□□ -1.55
VPS50-220ENST00000544910 ZIC1Q15915 447 aa5.35□□□□□ -1.55
VPS50-220ENST00000544910 GXYLT1Q4G148 440 aa5.35□□□□□ -1.55
VPS50-220ENST00000544910 AKR1C8PQ5T2L2 129 aa5.35□□□□□ -1.55
VPS50-220ENST00000544910 CD300LDQ6UXZ3 194 aa5.35□□□□□ -1.55
VPS50-220ENST00000544910 TMEM151BQ8IW70 566 aa5.35□□□□□ -1.55
VPS50-220ENST00000544910 SLC35F3Q8IY50 421 aa5.35□□□□□ -1.55
VPS50-220ENST00000544910 FBXL6Q8N531 539 aa5.35□□□□□ -1.55
VPS50-220ENST00000544910 LINC01555Q8NAE3 123 aa5.35□□□□□ -1.55
VPS50-220ENST00000544910 OR4M2Q8NGB6 313 aa5.35□□□□□ -1.55
VPS50-220ENST00000544910 NEK7Q8TDX7 302 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms