RNA–Protein interactions for RNA: ENST00000543123.1

RTN3-212, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 712 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-212ENST00000543123 KLHL24Q6TFL4 600 aa11.56□□□□□ -0.56
RTN3-212ENST00000543123 ABHD12BQ7Z5M8 362 aaPredicted RBP11.56□□□□□ -0.56
RTN3-212ENST00000543123 ATG4DQ86TL0 474 aaPredicted RBP11.56□□□□□ -0.56
RTN3-212ENST00000543123 CCDC103Q8IW40 242 aa11.56□□□□□ -0.56
RTN3-212ENST00000543123 OR52N5Q8NH56 324 aa11.56□□□□□ -0.56
RTN3-212ENST00000543123 MGARPQ8TDB4 240 aa11.56□□□□□ -0.56
RTN3-212ENST00000543123 NEUROG1Q92886 237 aa11.56□□□□□ -0.56
RTN3-212ENST00000543123 ITCHQ96J02 903 aa11.56□□□□□ -0.56
RTN3-212ENST00000543123 SF3B5Q9BWJ5 86 aaKnown RBP11.56□□□□□ -0.56
RTN3-212ENST00000543123 SLCO5A1Q9H2Y9 848 aa11.56□□□□□ -0.56
RTN3-212ENST00000543123 PIF1Q9H611 641 aa11.56□□□□□ -0.56
RTN3-212ENST00000543123 NPAP1Q9NZP6 1156 aa11.56□□□□□ -0.56
RTN3-212ENST00000543123 ZIM2Q9NZV7 527 aa11.56□□□□□ -0.56
RTN3-212ENST00000543123 ZNF232Q9UNY5 417 aa11.56□□□□□ -0.56
RTN3-212ENST00000543123 AMDHD2Q9Y303 409 aa11.56□□□□□ -0.56
RTN3-212ENST00000543123 CADP27708 2225 aa11.55□□□□□ -0.56
RTN3-212ENST00000543123 DNHD1Q96M86 4753 aa11.55□□□□□ -0.56
RTN3-212ENST00000543123 A0A096LPI6 279 aa11.55□□□□□ -0.56
RTN3-212ENST00000543123 TMEM72A0PK05 275 aa11.55□□□□□ -0.56
RTN3-212ENST00000543123 CDHR4A6H8M9 788 aa11.55□□□□□ -0.56
RTN3-212ENST00000543123 RNF223E7ERA6 249 aa11.55□□□□□ -0.56
RTN3-212ENST00000543123 RAMP1O60894 148 aa11.55□□□□□ -0.56
RTN3-212ENST00000543123 ADAM11O75078 769 aa11.55□□□□□ -0.56
RTN3-212ENST00000543123 ERLIN1O75477 346 aa11.55□□□□□ -0.56
RTN3-212ENST00000543123 THBS1P07996 1170 aa11.55□□□□□ -0.56
RTN3-212ENST00000543123 ZCCHC18P0CG32 403 aa11.55□□□□□ -0.56
RTN3-212ENST00000543123 CD40P25942 277 aa11.55□□□□□ -0.56
RTN3-212ENST00000543123 ZNF83P51522 516 aa11.55□□□□□ -0.56
RTN3-212ENST00000543123 WDR4P57081 412 aaKnown RBP11.55□□□□□ -0.56
RTN3-212ENST00000543123 DSTNP60981 165 aa11.55□□□□□ -0.56
RTN3-212ENST00000543123 PLAURQ03405 335 aa11.55□□□□□ -0.56
RTN3-212ENST00000543123 SLC17A1Q14916 467 aa11.55□□□□□ -0.56
RTN3-212ENST00000543123 COX20Q5RI15 118 aa11.55□□□□□ -0.56
RTN3-212ENST00000543123 OTUD3Q5T2D3 398 aaPredicted RBP11.55□□□□□ -0.56
RTN3-212ENST00000543123 WBP2NLQ6ICG8 309 aa11.55□□□□□ -0.56
RTN3-212ENST00000543123 FBXL14Q8N1E6 418 aa11.55□□□□□ -0.56
RTN3-212ENST00000543123 POMGNT2Q8NAT1 580 aa11.55□□□□□ -0.56
RTN3-212ENST00000543123 OR52P1PQ8NH57 321 aa11.55□□□□□ -0.56
RTN3-212ENST00000543123 TMEM45BQ96B21 275 aa11.55□□□□□ -0.56
RTN3-212ENST00000543123 DNAJA3Q96EY1 480 aa11.55□□□□□ -0.56
RTN3-212ENST00000543123 MAELQ96JY0 434 aaKnown RBP11.55□□□□□ -0.56
RTN3-212ENST00000543123 MUS81Q96NY9 551 aa11.55□□□□□ -0.56
RTN3-212ENST00000543123 DHRS9Q9BPW9 319 aa11.55□□□□□ -0.56
RTN3-212ENST00000543123 TAPBPLQ9BX59 468 aa11.55□□□□□ -0.56
RTN3-212ENST00000543123 REG4Q9BYZ8 158 aa11.55□□□□□ -0.56
RTN3-212ENST00000543123 ADAM19Q9H013 955 aa11.55□□□□□ -0.56
RTN3-212ENST00000543123 RAD21L1Q9H4I0 556 aa11.55□□□□□ -0.56
RTN3-212ENST00000543123 MANSC1Q9H8J5 431 aa11.55□□□□□ -0.56
RTN3-212ENST00000543123 FKRPQ9H9S5 495 aa11.55□□□□□ -0.56
RTN3-212ENST00000543123 SDR39U1Q9NRG7 319 aaPredicted RBP11.55□□□□□ -0.56
RTN3-212ENST00000543123 FLVCR1Q9Y5Y0 555 aa11.55□□□□□ -0.56
RTN3-212ENST00000543123 SLC25A15Q9Y619 301 aa11.55□□□□□ -0.56
RTN3-212ENST00000543123 DSPPQ9NZW4 1301 aa11.55□□□□□ -0.56
RTN3-212ENST00000543123 OR6C65A6NJZ3 312 aa11.54□□□□□ -0.56
RTN3-212ENST00000543123 A8MVM7 634 aa11.54□□□□□ -0.56
RTN3-212ENST00000543123 M0R1B8 84 aa11.54□□□□□ -0.56
RTN3-212ENST00000543123 UBDO15205 165 aa11.54□□□□□ -0.56
RTN3-212ENST00000543123 VAMP5O95183 116 aa11.54□□□□□ -0.56
RTN3-212ENST00000543123 WNT11O96014 354 aa11.54□□□□□ -0.56
RTN3-212ENST00000543123 IGHV4-39P01824 125 aa11.54□□□□□ -0.56
RTN3-212ENST00000543123 BCHEP06276 602 aa11.54□□□□□ -0.56
RTN3-212ENST00000543123 IMPDH2P12268 514 aa11.54□□□□□ -0.56
RTN3-212ENST00000543123 NCF2P19878 526 aaPredicted RBP11.54□□□□□ -0.56
RTN3-212ENST00000543123 PAX7P23759 505 aa11.54□□□□□ -0.56
RTN3-212ENST00000543123 ACVR1BP36896 505 aa11.54□□□□□ -0.56
RTN3-212ENST00000543123 DSCR9P59020 149 aa11.54□□□□□ -0.56
RTN3-212ENST00000543123 GABRA6Q16445 453 aa11.54□□□□□ -0.56
RTN3-212ENST00000543123 C6orf10Q5SRN2 563 aa11.54□□□□□ -0.56
RTN3-212ENST00000543123 ZNF544Q6NX49 715 aa11.54□□□□□ -0.56
RTN3-212ENST00000543123 MIER2Q8N344 545 aa11.54□□□□□ -0.56
RTN3-212ENST00000543123 CADM2Q8N3J6 435 aa11.54□□□□□ -0.56
RTN3-212ENST00000543123 AMBRA1Q9C0C7 1298 aa11.54□□□□□ -0.56
RTN3-212ENST00000543123 TPT1P8Q9HAU6 139 aa11.54□□□□□ -0.56
RTN3-212ENST00000543123 CBLN4Q9NTU7 201 aa11.54□□□□□ -0.56
RTN3-212ENST00000543123 ZNF443Q9Y2A4 671 aaPredicted RBP11.54□□□□□ -0.56
RTN3-212ENST00000543123 IFT52Q9Y366 437 aa11.54□□□□□ -0.56
RTN3-212ENST00000543123 A0A0G2JPF8 293 aa11.53□□□□□ -0.56
RTN3-212ENST00000543123 LIPT2A6NK58 231 aa11.53□□□□□ -0.56
RTN3-212ENST00000543123 AQP7P3A6NL99 342 aa11.53□□□□□ -0.56
RTN3-212ENST00000543123 HNRNPCL2B2RXH8 293 aa11.53□□□□□ -0.56
RTN3-212ENST00000543123 HNRNPCL3B7ZW38 293 aa11.53□□□□□ -0.56
RTN3-212ENST00000543123 PDLIM1O00151 329 aa11.53□□□□□ -0.56
RTN3-212ENST00000543123 TLX2O43763 284 aaPredicted RBP11.53□□□□□ -0.56
RTN3-212ENST00000543123 HNRNPCL1O60812 293 aaKnown RBP11.53□□□□□ -0.56
RTN3-212ENST00000543123 KRT33AO76009 404 aa11.53□□□□□ -0.56
RTN3-212ENST00000543123 CD8AP01732 235 aa11.53□□□□□ -0.56
RTN3-212ENST00000543123 ITGA5P08648 1049 aa11.53□□□□□ -0.56
RTN3-212ENST00000543123 HNRNPCL4P0DMR1 293 aa11.53□□□□□ -0.56
RTN3-212ENST00000543123 ETFAP13804 333 aa11.53□□□□□ -0.56
RTN3-212ENST00000543123 MPGP29372 298 aa11.53□□□□□ -0.56
RTN3-212ENST00000543123 TTKP33981 857 aa11.53□□□□□ -0.56
RTN3-212ENST00000543123 POLR2JP52435 117 aaKnown RBP11.53□□□□□ -0.56
RTN3-212ENST00000543123 NUDT6P53370 316 aa11.53□□□□□ -0.56
RTN3-212ENST00000543123 PRPS1P60891 318 aa11.53□□□□□ -0.56
RTN3-212ENST00000543123 STX1BP61266 288 aa11.53□□□□□ -0.56
RTN3-212ENST00000543123 MAGOHP61326 146 aaKnown RBP11.53□□□□□ -0.56
RTN3-212ENST00000543123 CEACAM7Q14002 265 aa11.53□□□□□ -0.56
RTN3-212ENST00000543123 OR7A5Q15622 319 aa11.53□□□□□ -0.56
RTN3-212ENST00000543123 PRAMEF8Q5VWM4 474 aa11.53□□□□□ -0.56
RTN3-212ENST00000543123 PRAMEF7Q5VXH5 474 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 96.8 ms