RNA–Protein interactions for RNA: ENST00000542244.5

DDX11-220, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 1 (best)

Gene DDX11, Length 1,193 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-220ENST00000542244 CLIP4Q8N3C7 705 aa17.42■□□□□ 0.38
DDX11-220ENST00000542244 OIT3Q8WWZ8 545 aa17.42■□□□□ 0.38
DDX11-220ENST00000542244 VPS33AQ96AX1 596 aa17.42■□□□□ 0.38
DDX11-220ENST00000542244 HS6ST2Q96MM7 605 aa17.42■□□□□ 0.38
DDX11-220ENST00000542244 AMBRA1Q9C0C7 1298 aa17.42■□□□□ 0.38
DDX11-220ENST00000542244 ALG2Q9H553 416 aa17.42■□□□□ 0.38
DDX11-220ENST00000542244 MTHFD2LQ9H903 347 aaPredicted RBP17.42■□□□□ 0.38
DDX11-220ENST00000542244 YAE1D1Q9NRH1 226 aa17.42■□□□□ 0.38
DDX11-220ENST00000542244 ABCA1O95477 2261 aa17.42■□□□□ 0.38
DDX11-220ENST00000542244 CFAP73A6NFT4 308 aa17.41■□□□□ 0.38
DDX11-220ENST00000542244 GPR171O14626 319 aa17.41■□□□□ 0.38
DDX11-220ENST00000542244 ZNF208O43345 1280 aa17.41■□□□□ 0.38
DDX11-220ENST00000542244 DNPH1O43598 174 aa17.41■□□□□ 0.38
DDX11-220ENST00000542244 SNNO75324 88 aaPredicted RBP17.41■□□□□ 0.38
DDX11-220ENST00000542244 P2RY4P51582 365 aa17.41■□□□□ 0.38
DDX11-220ENST00000542244 SLC35A1P78382 337 aa17.41■□□□□ 0.38
DDX11-220ENST00000542244 ETFDHQ16134 617 aa17.41■□□□□ 0.38
DDX11-220ENST00000542244 SPATA19Q7Z5L4 167 aa17.41■□□□□ 0.38
DDX11-220ENST00000542244 OR9I1Q8NGQ6 314 aa17.41■□□□□ 0.38
DDX11-220ENST00000542244 NANOS1Q8WY41 292 aaKnown RBP17.41■□□□□ 0.38
DDX11-220ENST00000542244 DHRS9Q9BPW9 319 aa17.41■□□□□ 0.38
DDX11-220ENST00000542244 GRIP2Q9C0E4 1043 aa17.41■□□□□ 0.38
DDX11-220ENST00000542244 SLC17A5Q9NRA2 495 aa17.41■□□□□ 0.38
DDX11-220ENST00000542244 RAB21Q9UL25 225 aa17.41■□□□□ 0.38
DDX11-220ENST00000542244 CHD3Q12873 2000 aaKnown RBP17.41■□□□□ 0.38
DDX11-220ENST00000542244 PLCE1Q9P212 2302 aa17.4■□□□□ 0.38
DDX11-220ENST00000542244 FAM234BA2RU67 622 aa17.4■□□□□ 0.38
DDX11-220ENST00000542244 LIPT2A6NK58 231 aa17.4■□□□□ 0.38
DDX11-220ENST00000542244 CD5LO43866 347 aa17.4■□□□□ 0.38
DDX11-220ENST00000542244 IL7RP16871 459 aa17.4■□□□□ 0.38
DDX11-220ENST00000542244 OR7A5Q15622 319 aa17.4■□□□□ 0.38
DDX11-220ENST00000542244 HIKESHIQ53FT3 197 aa17.4■□□□□ 0.38
DDX11-220ENST00000542244 OTUD3Q5T2D3 398 aaPredicted RBP17.4■□□□□ 0.38
DDX11-220ENST00000542244 HHATQ5VTY9 493 aa17.4■□□□□ 0.38
DDX11-220ENST00000542244 AGAP6Q5VW22 663 aa17.4■□□□□ 0.38
DDX11-220ENST00000542244 TMEM108Q6UXF1 575 aa17.4■□□□□ 0.38
DDX11-220ENST00000542244 LINGO2Q7L985 606 aa17.4■□□□□ 0.38
DDX11-220ENST00000542244 CXXC5Q7LFL8 322 aaKnown RBP17.4■□□□□ 0.38
DDX11-220ENST00000542244 CMIPQ8IY22 773 aa17.4■□□□□ 0.38
DDX11-220ENST00000542244 ZNF525Q8N782 197 aa17.4■□□□□ 0.38
DDX11-220ENST00000542244 OR10H5Q8NGA6 315 aa17.4■□□□□ 0.38
DDX11-220ENST00000542244 DDIT4LQ96D03 193 aa17.4■□□□□ 0.38
DDX11-220ENST00000542244 OR52B2Q96RD2 323 aa17.4■□□□□ 0.38
DDX11-220ENST00000542244 CBLN4Q9NTU7 201 aa17.4■□□□□ 0.38
DDX11-220ENST00000542244 POU2F3Q9UKI9 436 aa17.4■□□□□ 0.38
DDX11-220ENST00000542244 DSPPQ9NZW4 1301 aa17.4■□□□□ 0.38
DDX11-220ENST00000542244 TMEM120BA0PK00 339 aa17.39■□□□□ 0.37
DDX11-220ENST00000542244 CDHR4A6H8M9 788 aa17.39■□□□□ 0.37
DDX11-220ENST00000542244 FAAHO00519 579 aa17.39■□□□□ 0.37
DDX11-220ENST00000542244 KLF11O14901 512 aa17.39■□□□□ 0.37
DDX11-220ENST00000542244 HDAC3O15379 428 aa17.39■□□□□ 0.37
DDX11-220ENST00000542244 FRS3O43559 492 aa17.39■□□□□ 0.37
DDX11-220ENST00000542244 BCHEP06276 602 aa17.39■□□□□ 0.37
DDX11-220ENST00000542244 DBIP07108 87 aaKnown RBP17.39■□□□□ 0.37
DDX11-220ENST00000542244 NUDT7P0C024 238 aa17.39■□□□□ 0.37
DDX11-220ENST00000542244 TFPTP0C1Z6 253 aa17.39■□□□□ 0.37
DDX11-220ENST00000542244 CDH2P19022 906 aaPredicted RBP17.39■□□□□ 0.37
DDX11-220ENST00000542244 PTAFRP25105 342 aa17.39■□□□□ 0.37
DDX11-220ENST00000542244 HTR3AP46098 478 aa17.39■□□□□ 0.37
DDX11-220ENST00000542244 FABP6P51161 128 aa17.39■□□□□ 0.37
DDX11-220ENST00000542244 HOXC5Q00444 222 aa17.39■□□□□ 0.37
DDX11-220ENST00000542244 MUC15Q8N387 334 aa17.39■□□□□ 0.37
DDX11-220ENST00000542244 CADM2Q8N3J6 435 aa17.39■□□□□ 0.37
DDX11-220ENST00000542244 OR9K2Q8NGE7 335 aa17.39■□□□□ 0.37
DDX11-220ENST00000542244 OR52P1PQ8NH57 321 aa17.39■□□□□ 0.37
DDX11-220ENST00000542244 SLC38A5Q8WUX1 472 aa17.39■□□□□ 0.37
DDX11-220ENST00000542244 ATP23Q9Y6H3 246 aa17.39■□□□□ 0.37
DDX11-220ENST00000542244 ATRQ13535 2644 aa17.38■□□□□ 0.37
DDX11-220ENST00000542244 ATP6V1G2-DDX39BF2Z307 99 aa17.38■□□□□ 0.37
DDX11-220ENST00000542244 RFXANKO14593 260 aa17.38■□□□□ 0.37
DDX11-220ENST00000542244 SNUPNO95149 360 aaKnown RBP17.38■□□□□ 0.37
DDX11-220ENST00000542244 NUDT6P53370 316 aa17.38■□□□□ 0.37
DDX11-220ENST00000542244 MST1LQ2TV78 715 aa17.38■□□□□ 0.37
DDX11-220ENST00000542244 NXNQ6DKJ4 435 aa17.38■□□□□ 0.37
DDX11-220ENST00000542244 PAQR6Q6TCH4 344 aa17.38■□□□□ 0.37
DDX11-220ENST00000542244 MAELQ96JY0 434 aaKnown RBP17.38■□□□□ 0.37
DDX11-220ENST00000542244 NAA11Q9BSU3 229 aaPredicted RBP17.38■□□□□ 0.37
DDX11-220ENST00000542244 MANSC1Q9H8J5 431 aa17.38■□□□□ 0.37
DDX11-220ENST00000542244 UPB1Q9UBR1 384 aa17.38■□□□□ 0.37
DDX11-220ENST00000542244 SEC14L4Q9UDX3 406 aa17.38■□□□□ 0.37
DDX11-220ENST00000542244 ZNF443Q9Y2A4 671 aaPredicted RBP17.38■□□□□ 0.37
DDX11-220ENST00000542244 SLC9A8Q9Y2E8 581 aa17.38■□□□□ 0.37
DDX11-220ENST00000542244 COL6A5A8TX70 2615 aa17.38■□□□□ 0.37
DDX11-220ENST00000542244 AQP7P3A6NL99 342 aa17.37■□□□□ 0.37
DDX11-220ENST00000542244 EIF1BO60739 113 aaKnown RBP17.37■□□□□ 0.37
DDX11-220ENST00000542244 CRATP43155 626 aa17.37■□□□□ 0.37
DDX11-220ENST00000542244 SELENOPP49908 381 aa17.37■□□□□ 0.37
DDX11-220ENST00000542244 TUBA1BP68363 451 aa17.37■□□□□ 0.37
DDX11-220ENST00000542244 TUBA4AP68366 448 aa17.37■□□□□ 0.37
DDX11-220ENST00000542244 PDCD4Q53EL6 469 aaKnown RBP17.37■□□□□ 0.37
DDX11-220ENST00000542244 KLHL17Q6TDP4 642 aa17.37■□□□□ 0.37
DDX11-220ENST00000542244 TUBA1AQ71U36 451 aa17.37■□□□□ 0.37
DDX11-220ENST00000542244 AAED1Q7RTV5 226 aa17.37■□□□□ 0.37
DDX11-220ENST00000542244 SERPINA11Q86U17 422 aa17.37■□□□□ 0.37
DDX11-220ENST00000542244 COMTD1Q86VU5 262 aa17.37■□□□□ 0.37
DDX11-220ENST00000542244 KDM8Q8N371 416 aa17.37■□□□□ 0.37
DDX11-220ENST00000542244 TRIML2Q8N7C3 387 aa17.37■□□□□ 0.37
DDX11-220ENST00000542244 PMM1Q92871 262 aa17.37■□□□□ 0.37
DDX11-220ENST00000542244 TMEM45BQ96B21 275 aa17.37■□□□□ 0.37
DDX11-220ENST00000542244 TMEM19Q96HH6 336 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms