RNA–Protein interactions for RNA: ENST00000541982.5

CD4-210, Transcript of CD4 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD4, Length 1,187 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-210ENST00000541982 SWI5Q1ZZU3 235 aa13.6□□□□□ -0.23
CD4-210ENST00000541982 ABLIM2Q6H8Q1 611 aa13.6□□□□□ -0.23
CD4-210ENST00000541982 OLIG3Q7RTU3 272 aa13.6□□□□□ -0.23
CD4-210ENST00000541982 MTDHQ86UE4 582 aaKnown RBP13.6□□□□□ -0.23
CD4-210ENST00000541982 ANKRD46Q86W74 232 aa13.6□□□□□ -0.23
CD4-210ENST00000541982 C17orf78Q8N4C9 275 aa13.6□□□□□ -0.23
CD4-210ENST00000541982 ROPN1LQ96C74 230 aa13.6□□□□□ -0.23
CD4-210ENST00000541982 FBXO17Q96EF6 278 aa13.6□□□□□ -0.23
CD4-210ENST00000541982 NEURL3Q96EH8 262 aa13.6□□□□□ -0.23
CD4-210ENST00000541982 FOXN4Q96NZ1 517 aa13.6□□□□□ -0.23
CD4-210ENST00000541982 SORT1Q99523 831 aa13.6□□□□□ -0.23
CD4-210ENST00000541982 CCDC106Q9BWC9 280 aa13.6□□□□□ -0.23
CD4-210ENST00000541982 ADAM19Q9H013 955 aa13.6□□□□□ -0.23
CD4-210ENST00000541982 EXOSC3Q9NQT5 275 aaKnown RBP13.6□□□□□ -0.23
CD4-210ENST00000541982 MALT1Q9UDY8 824 aa13.6□□□□□ -0.23
CD4-210ENST00000541982 DNPH1O43598 174 aa13.59□□□□□ -0.23
CD4-210ENST00000541982 MRPL33O75394 65 aaKnown RBP13.59□□□□□ -0.23
CD4-210ENST00000541982 KHKP50053 298 aa13.59□□□□□ -0.23
CD4-210ENST00000541982 KCNJ10P78508 379 aa13.59□□□□□ -0.23
CD4-210ENST00000541982 TXNL4AP83876 142 aaKnown RBP13.59□□□□□ -0.23
CD4-210ENST00000541982 TGFBR3Q03167 851 aa13.59□□□□□ -0.23
CD4-210ENST00000541982 SPANXN4Q5MJ08 99 aa13.59□□□□□ -0.23
CD4-210ENST00000541982 TNFAIP8L2Q6P589 184 aaPredicted RBP13.59□□□□□ -0.23
CD4-210ENST00000541982 FRRS1Q6ZNA5 592 aa13.59□□□□□ -0.23
CD4-210ENST00000541982 GRINAQ7Z429 371 aa13.59□□□□□ -0.23
CD4-210ENST00000541982 C1orf162Q8NEQ5 155 aaPredicted RBP13.59□□□□□ -0.23
CD4-210ENST00000541982 ZNF563Q8TA94 476 aa13.59□□□□□ -0.23
CD4-210ENST00000541982 PIGXQ8TBF5 258 aa13.59□□□□□ -0.23
CD4-210ENST00000541982 ZFAND2BQ8WV99 257 aa13.59□□□□□ -0.23
CD4-210ENST00000541982 RAB8BQ92930 207 aa13.59□□□□□ -0.23
CD4-210ENST00000541982 C1orf159Q96HA4 380 aa13.59□□□□□ -0.23
CD4-210ENST00000541982 SORCS2Q96PQ0 1159 aa13.59□□□□□ -0.23
CD4-210ENST00000541982 C1QTNF6Q9BXI9 259 aa13.59□□□□□ -0.23
CD4-210ENST00000541982 CTPS2Q9NRF8 586 aa13.59□□□□□ -0.23
CD4-210ENST00000541982 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.59□□□□□ -0.23
CD4-210ENST00000541982 MARCOQ9UEW3 520 aaPredicted RBP13.59□□□□□ -0.23
CD4-210ENST00000541982 CHRNA9Q9UGM1 479 aa13.59□□□□□ -0.23
CD4-210ENST00000541982 TMEFF2Q9UIK5 374 aaPredicted RBP13.59□□□□□ -0.23
CD4-210ENST00000541982 BTNL2Q9UIR0 455 aa13.59□□□□□ -0.23
CD4-210ENST00000541982 HDGFL3Q9Y3E1 203 aa13.59□□□□□ -0.23
CD4-210ENST00000541982 A0A0A6YYJ9 748 aa13.58□□□□□ -0.24
CD4-210ENST00000541982 E9PBE3 544 aa13.58□□□□□ -0.24
CD4-210ENST00000541982 SLCO1B7G3V0H7 640 aa13.58□□□□□ -0.24
CD4-210ENST00000541982 PMS2P2O95744 297 aa13.58□□□□□ -0.24
CD4-210ENST00000541982 PCMT1P22061 227 aa13.58□□□□□ -0.24
CD4-210ENST00000541982 S100A3P33764 101 aa13.58□□□□□ -0.24
CD4-210ENST00000541982 FUT5Q11128 374 aa13.58□□□□□ -0.24
CD4-210ENST00000541982 STX3Q13277 289 aa13.58□□□□□ -0.24
CD4-210ENST00000541982 TNFAIP8L3Q5GJ75 292 aa13.58□□□□□ -0.24
CD4-210ENST00000541982 OGFOD2Q6N063 350 aa13.58□□□□□ -0.24
CD4-210ENST00000541982 UGT2A3Q6UWM9 527 aa13.58□□□□□ -0.24
CD4-210ENST00000541982 SLC46A3Q7Z3Q1 461 aa13.58□□□□□ -0.24
CD4-210ENST00000541982 WDR31Q8NA23 367 aa13.58□□□□□ -0.24
CD4-210ENST00000541982 SGMS2Q8NHU3 365 aa13.58□□□□□ -0.24
CD4-210ENST00000541982 ZG16BQ96DA0 208 aa13.58□□□□□ -0.24
CD4-210ENST00000541982 CCDC115Q96NT0 180 aa13.58□□□□□ -0.24
CD4-210ENST00000541982 VRK1Q99986 396 aaPredicted RBP13.58□□□□□ -0.24
CD4-210ENST00000541982 SLC35A5Q9BS91 424 aa13.58□□□□□ -0.24
CD4-210ENST00000541982 NUF2Q9BZD4 464 aa13.58□□□□□ -0.24
CD4-210ENST00000541982 BPESC1Q9GZL8 116 aa13.58□□□□□ -0.24
CD4-210ENST00000541982 MEAF6Q9HAF1 191 aa13.58□□□□□ -0.24
CD4-210ENST00000541982 SLC17A5Q9NRA2 495 aa13.58□□□□□ -0.24
CD4-210ENST00000541982 DCTN4Q9UJW0 460 aa13.58□□□□□ -0.24
CD4-210ENST00000541982 FBXO9Q9UK97 447 aaPredicted RBP13.58□□□□□ -0.24
CD4-210ENST00000541982 PRAMEF27A3QJZ7 478 aa13.57□□□□□ -0.24
CD4-210ENST00000541982 ZNF716A6NP11 495 aa13.57□□□□□ -0.24
CD4-210ENST00000541982 WNT11O96014 354 aa13.57□□□□□ -0.24
CD4-210ENST00000541982 ITGA5P08648 1049 aa13.57□□□□□ -0.24
CD4-210ENST00000541982 TFPIP10646 304 aa13.57□□□□□ -0.24
CD4-210ENST00000541982 BGNP21810 368 aa13.57□□□□□ -0.24
CD4-210ENST00000541982 CHI3L1P36222 383 aaPredicted RBP13.57□□□□□ -0.24
CD4-210ENST00000541982 HTR3AP46098 478 aa13.57□□□□□ -0.24
CD4-210ENST00000541982 CHN2P52757 468 aa13.57□□□□□ -0.24
CD4-210ENST00000541982 SLC16A1P53985 500 aa13.57□□□□□ -0.24
CD4-210ENST00000541982 PRPS1P60891 318 aa13.57□□□□□ -0.24
CD4-210ENST00000541982 HPCAP84074 193 aa13.57□□□□□ -0.24
CD4-210ENST00000541982 LRRC74AQ0VAA2 488 aa13.57□□□□□ -0.24
CD4-210ENST00000541982 MST1LQ2TV78 715 aa13.57□□□□□ -0.24
CD4-210ENST00000541982 FAM174BQ3ZCQ3 159 aa13.57□□□□□ -0.24
CD4-210ENST00000541982 GPAT3Q53EU6 434 aa13.57□□□□□ -0.24
CD4-210ENST00000541982 KLHL24Q6TFL4 600 aa13.57□□□□□ -0.24
CD4-210ENST00000541982 ADGRG3Q86Y34 549 aa13.57□□□□□ -0.24
CD4-210ENST00000541982 CMIPQ8IY22 773 aa13.57□□□□□ -0.24
CD4-210ENST00000541982 ARFGAP2Q8N6H7 521 aa13.57□□□□□ -0.24
CD4-210ENST00000541982 TRIML2Q8N7C3 387 aa13.57□□□□□ -0.24
CD4-210ENST00000541982 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.57□□□□□ -0.24
CD4-210ENST00000541982 HPS1Q92902 700 aa13.57□□□□□ -0.24
CD4-210ENST00000541982 KCNS3Q9BQ31 491 aa13.57□□□□□ -0.24
CD4-210ENST00000541982 PARPBPQ9NWS1 579 aa13.57□□□□□ -0.24
CD4-210ENST00000541982 UPB1Q9UBR1 384 aa13.57□□□□□ -0.24
CD4-210ENST00000541982 METRNQ9UJH8 293 aa13.57□□□□□ -0.24
CD4-210ENST00000541982 TRAPPC4Q9Y296 219 aa13.57□□□□□ -0.24
CD4-210ENST00000541982 B9A039 149 aa13.56□□□□□ -0.24
CD4-210ENST00000541982 ATP6V1G2-DDX39BF2Z307 99 aa13.56□□□□□ -0.24
CD4-210ENST00000541982 HMGN4O00479 90 aa13.56□□□□□ -0.24
CD4-210ENST00000541982 BCAS1O75363 584 aaPredicted RBP13.56□□□□□ -0.24
CD4-210ENST00000541982 RYKP34925 604 aa13.56□□□□□ -0.24
CD4-210ENST00000541982 SERPINF1P36955 418 aa13.56□□□□□ -0.24
CD4-210ENST00000541982 MAGEA8P43361 318 aa13.56□□□□□ -0.24
CD4-210ENST00000541982 ANXA11P50995 505 aaKnown RBP13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms