RNA–Protein interactions for RNA: ENST00000541576.5

THBS3-210, Transcript of thrombospondin 3, humanhuman

TSL 1 (best) BASIC

Gene THBS3, Length 3,200 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-210ENST00000541576 CCDC120Q96HB5 630 aa7.93□□□□□ -1.14
THBS3-210ENST00000541576 YTHDF1Q9BYJ9 559 aaKnown RBP7.93□□□□□ -1.14
THBS3-210ENST00000541576 FBXL4Q9UKA2 621 aa7.93□□□□□ -1.14
THBS3-210ENST00000541576 CNTRLQ7Z7A1 2325 aa7.93□□□□□ -1.14
THBS3-210ENST00000541576 LOC101059948A0A1B0GTJ6 334 aa7.92□□□□□ -1.14
THBS3-210ENST00000541576 PNMA8CA0A1B0GUJ8 204 aa7.92□□□□□ -1.14
THBS3-210ENST00000541576 C12orf71A8MTZ7 269 aa7.92□□□□□ -1.14
THBS3-210ENST00000541576 TERTO14746 1132 aaKnown RBP7.92□□□□□ -1.14
THBS3-210ENST00000541576 ITGA10O75578 1167 aa7.92□□□□□ -1.14
THBS3-210ENST00000541576 UPK1BO75841 260 aa7.92□□□□□ -1.14
THBS3-210ENST00000541576 ICAM2P13598 275 aa7.92□□□□□ -1.14
THBS3-210ENST00000541576 FPR3P25089 353 aa7.92□□□□□ -1.14
THBS3-210ENST00000541576 CD82P27701 267 aa7.92□□□□□ -1.14
THBS3-210ENST00000541576 C21orf33P30042 268 aaPredicted RBP7.92□□□□□ -1.14
THBS3-210ENST00000541576 SLC6A8P48029 635 aa7.92□□□□□ -1.14
THBS3-210ENST00000541576 IDH2P48735 452 aaKnown RBP7.92□□□□□ -1.14
THBS3-210ENST00000541576 PPP5CP53041 499 aa7.92□□□□□ -1.14
THBS3-210ENST00000541576 TSPAN31Q12999 210 aa7.92□□□□□ -1.14
THBS3-210ENST00000541576 WBP2NLQ6ICG8 309 aa7.92□□□□□ -1.14
THBS3-210ENST00000541576 GDPD3Q7L5L3 318 aa7.92□□□□□ -1.14
THBS3-210ENST00000541576 KIF18BQ86Y91 864 aa7.92□□□□□ -1.14
THBS3-210ENST00000541576 HGDQ93099 445 aa7.92□□□□□ -1.14
THBS3-210ENST00000541576 HS6ST2Q96MM7 605 aa7.92□□□□□ -1.14
THBS3-210ENST00000541576 P4HTMQ9NXG6 502 aa7.92□□□□□ -1.14
THBS3-210ENST00000541576 ZNF226Q9NYT6 803 aa7.92□□□□□ -1.14
THBS3-210ENST00000541576 MED31Q9Y3C7 131 aa7.92□□□□□ -1.14
THBS3-210ENST00000541576 SMLR1H3BR10 107 aa7.92□□□□□ -1.14
THBS3-210ENST00000541576 KLF4O43474 513 aa7.92□□□□□ -1.14
THBS3-210ENST00000541576 HPP00738 406 aa7.92□□□□□ -1.14
THBS3-210ENST00000541576 FBXO45P0C2W1 286 aa7.92□□□□□ -1.14
THBS3-210ENST00000541576 RBM34P42696 430 aaKnown RBP7.92□□□□□ -1.14
THBS3-210ENST00000541576 GPR4P46093 362 aa7.92□□□□□ -1.14
THBS3-210ENST00000541576 RAB25P57735 213 aa7.92□□□□□ -1.14
THBS3-210ENST00000541576 IL10RAQ13651 578 aa7.92□□□□□ -1.14
THBS3-210ENST00000541576 MRGPREQ86SM8 312 aa7.92□□□□□ -1.14
THBS3-210ENST00000541576 MISPQ8IVT2 679 aa7.92□□□□□ -1.14
THBS3-210ENST00000541576 IL22RA1Q8N6P7 574 aa7.92□□□□□ -1.14
THBS3-210ENST00000541576 PFN4Q8NHR9 129 aa7.92□□□□□ -1.14
THBS3-210ENST00000541576 RHOXF1Q8NHV9 184 aa7.92□□□□□ -1.14
THBS3-210ENST00000541576 ZNF563Q8TA94 476 aa7.92□□□□□ -1.14
THBS3-210ENST00000541576 ADAMTS14Q8WXS8 1223 aa7.92□□□□□ -1.14
THBS3-210ENST00000541576 MUL1Q969V5 352 aa7.92□□□□□ -1.14
THBS3-210ENST00000541576 C3orf49Q96BT1 292 aa7.92□□□□□ -1.14
THBS3-210ENST00000541576 SPACA9Q96E40 222 aaPredicted RBP7.92□□□□□ -1.14
THBS3-210ENST00000541576 C20orf141Q9NUB4 165 aa7.92□□□□□ -1.14
THBS3-210ENST00000541576 SCN3BQ9NY72 215 aa7.92□□□□□ -1.14
THBS3-210ENST00000541576 SPTBN2O15020 2390 aa7.92□□□□□ -1.14
THBS3-210ENST00000541576 LOC110117498-PIK3R3F6TDL0 507 aa7.91□□□□□ -1.14
THBS3-210ENST00000541576 CTDSP2O14595 271 aa7.91□□□□□ -1.14
THBS3-210ENST00000541576 GMFGO60234 142 aa7.91□□□□□ -1.14
THBS3-210ENST00000541576 GABRB1P18505 474 aa7.91□□□□□ -1.14
THBS3-210ENST00000541576 ITPKBP27987 946 aa7.91□□□□□ -1.14
THBS3-210ENST00000541576 MXD1Q05195 221 aa7.91□□□□□ -1.14
THBS3-210ENST00000541576 RBM48Q5RL73 367 aaKnown RBP7.91□□□□□ -1.14
THBS3-210ENST00000541576 ARMC4Q5T2S8 1044 aa7.91□□□□□ -1.14
THBS3-210ENST00000541576 NRARPQ7Z6K4 114 aa7.91□□□□□ -1.14
THBS3-210ENST00000541576 RAB43Q86YS6 212 aa7.91□□□□□ -1.14
THBS3-210ENST00000541576 P3H2Q8IVL5 708 aa7.91□□□□□ -1.14
THBS3-210ENST00000541576 IQCF1Q8N6M8 205 aa7.91□□□□□ -1.14
THBS3-210ENST00000541576 OR10G3Q8NGC4 313 aa7.91□□□□□ -1.14
THBS3-210ENST00000541576 DUSP19Q8WTR2 217 aa7.91□□□□□ -1.14
THBS3-210ENST00000541576 NKD1Q969G9 470 aa7.91□□□□□ -1.14
THBS3-210ENST00000541576 ZNF426Q9BUY5 554 aa7.91□□□□□ -1.14
THBS3-210ENST00000541576 PLA2G12AQ9BZM1 189 aa7.91□□□□□ -1.14
THBS3-210ENST00000541576 EGLN3Q9H6Z9 239 aa7.91□□□□□ -1.14
THBS3-210ENST00000541576 TIGARQ9NQ88 270 aa7.91□□□□□ -1.14
THBS3-210ENST00000541576 NUFIP1Q9UHK0 495 aaKnown RBP7.91□□□□□ -1.14
THBS3-210ENST00000541576 ICAM5Q9UMF0 924 aa7.91□□□□□ -1.14
THBS3-210ENST00000541576 YARS2Q9Y2Z4 477 aaKnown RBP7.91□□□□□ -1.14
THBS3-210ENST00000541576 MRPS18BQ9Y676 258 aaKnown RBP7.91□□□□□ -1.14
THBS3-210ENST00000541576 MASP2O00187 686 aa7.91□□□□□ -1.14
THBS3-210ENST00000541576 CDC42EP2O14613 210 aa7.91□□□□□ -1.14
THBS3-210ENST00000541576 ADAM10O14672 748 aa7.91□□□□□ -1.14
THBS3-210ENST00000541576 NUDT14O95848 222 aa7.91□□□□□ -1.14
THBS3-210ENST00000541576 GADD45AP24522 165 aa7.91□□□□□ -1.14
THBS3-210ENST00000541576 SOX3P41225 446 aa7.91□□□□□ -1.14
THBS3-210ENST00000541576 CDC42P60953 191 aa7.91□□□□□ -1.14
THBS3-210ENST00000541576 PRKCDQ05655 676 aa7.91□□□□□ -1.14
THBS3-210ENST00000541576 TUBA3CQ13748 450 aa7.91□□□□□ -1.14
THBS3-210ENST00000541576 NTRK2Q16620 822 aa7.91□□□□□ -1.14
THBS3-210ENST00000541576 ZNF404Q494X3 552 aa7.91□□□□□ -1.14
THBS3-210ENST00000541576 FCRLBQ6BAA4 426 aa7.91□□□□□ -1.14
THBS3-210ENST00000541576 LINC00114Q6XXX2 140 aa7.91□□□□□ -1.14
THBS3-210ENST00000541576 RASSF6Q6ZTQ3 369 aa7.91□□□□□ -1.14
THBS3-210ENST00000541576 RPS19BP1Q86WX3 136 aaKnown RBP7.91□□□□□ -1.14
THBS3-210ENST00000541576 CDK20Q8IZL9 346 aa7.91□□□□□ -1.14
THBS3-210ENST00000541576 OR5W2Q8NH69 310 aa7.91□□□□□ -1.14
THBS3-210ENST00000541576 RANGRFQ9HD47 186 aaPredicted RBP7.91□□□□□ -1.14
THBS3-210ENST00000541576 ATP13A2Q9NQ11 1180 aa7.91□□□□□ -1.14
THBS3-210ENST00000541576 MEPEQ9NQ76 525 aaPredicted RBP7.91□□□□□ -1.14
THBS3-210ENST00000541576 IMPAD1Q9NX62 359 aa7.91□□□□□ -1.14
THBS3-210ENST00000541576 QPCTLQ9NXS2 382 aa7.91□□□□□ -1.14
THBS3-210ENST00000541576 TAS2R16Q9NYV7 291 aa7.91□□□□□ -1.14
THBS3-210ENST00000541576 KLRF1Q9NZS2 232 aa7.91□□□□□ -1.14
THBS3-210ENST00000541576 RABL2AQ9UBK7 228 aaPredicted RBP7.91□□□□□ -1.14
THBS3-210ENST00000541576 TMEM5Q9Y2B1 443 aa7.91□□□□□ -1.14
THBS3-210ENST00000541576 A0A087WUJ7 227 aa7.91□□□□□ -1.14
THBS3-210ENST00000541576 CDRT15L2A8MXV6 281 aa7.91□□□□□ -1.14
THBS3-210ENST00000541576 GNB5O14775 395 aa7.91□□□□□ -1.14
THBS3-210ENST00000541576 SLC22A1O15245 554 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms