RNA–Protein interactions for RNA: ENST00000541259.1

DDX55-208, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-208ENST00000541259 MBOAT2Q6ZWT7 520 aa8.41□□□□□ -1.06
DDX55-208ENST00000541259 ZER1Q7Z7L7 766 aa8.41□□□□□ -1.06
DDX55-208ENST00000541259 NRMQ8IXM6 262 aa8.41□□□□□ -1.06
DDX55-208ENST00000541259 ZNF295-AS1Q8N0V1 137 aa8.41□□□□□ -1.06
DDX55-208ENST00000541259 OR5K1Q8NHB7 308 aa8.41□□□□□ -1.06
DDX55-208ENST00000541259 GIPC3Q8TF64 312 aa8.41□□□□□ -1.06
DDX55-208ENST00000541259 NRG4Q8WWG1 115 aa8.41□□□□□ -1.06
DDX55-208ENST00000541259 SMPDL3BQ92485 455 aa8.41□□□□□ -1.06
DDX55-208ENST00000541259 TAAR8Q969N4 342 aa8.41□□□□□ -1.06
DDX55-208ENST00000541259 KTI12Q96EK9 354 aaPredicted RBP8.41□□□□□ -1.06
DDX55-208ENST00000541259 ARL5BQ96KC2 179 aa8.41□□□□□ -1.06
DDX55-208ENST00000541259 HS6ST2Q96MM7 605 aa8.41□□□□□ -1.06
DDX55-208ENST00000541259 GPA33Q99795 319 aa8.41□□□□□ -1.06
DDX55-208ENST00000541259 SLC29A1Q99808 456 aa8.41□□□□□ -1.06
DDX55-208ENST00000541259 CIB1Q99828 191 aa8.41□□□□□ -1.06
DDX55-208ENST00000541259 LDAHQ9H6V9 325 aa8.41□□□□□ -1.06
DDX55-208ENST00000541259 EXO5Q9H790 373 aa8.41□□□□□ -1.06
DDX55-208ENST00000541259 SMURF2Q9HAU4 748 aa8.41□□□□□ -1.06
DDX55-208ENST00000541259 ACKR4Q9NPB9 350 aa8.41□□□□□ -1.06
DDX55-208ENST00000541259 SERINC1Q9NRX5 453 aa8.41□□□□□ -1.06
DDX55-208ENST00000541259 PDP1Q9P0J1 537 aaPredicted RBP8.41□□□□□ -1.06
DDX55-208ENST00000541259 C6orf203Q9P0P8 240 aaPredicted RBP8.41□□□□□ -1.06
DDX55-208ENST00000541259 SPRR3Q9UBC9 169 aa8.41□□□□□ -1.06
DDX55-208ENST00000541259 CHRNA9Q9UGM1 479 aa8.41□□□□□ -1.06
DDX55-208ENST00000541259 TRGV5A0A0B4J1U4 118 aa8.4□□□□□ -1.06
DDX55-208ENST00000541259 A0A0J9YW62 118 aa8.4□□□□□ -1.06
DDX55-208ENST00000541259 A0A1W2PNR3 127 aa8.4□□□□□ -1.06
DDX55-208ENST00000541259 ENO4A6NNW6 628 aa8.4□□□□□ -1.06
DDX55-208ENST00000541259 A8MVM7 634 aa8.4□□□□□ -1.06
DDX55-208ENST00000541259 G3V2T6 193 aa8.4□□□□□ -1.06
DDX55-208ENST00000541259 SOCS2O14508 198 aa8.4□□□□□ -1.06
DDX55-208ENST00000541259 ZNF208O43345 1280 aa8.4□□□□□ -1.06
DDX55-208ENST00000541259 OR10H3O60404 316 aa8.4□□□□□ -1.06
DDX55-208ENST00000541259 CH25HO95992 272 aa8.4□□□□□ -1.06
DDX55-208ENST00000541259 GASTP01350 101 aa8.4□□□□□ -1.06
DDX55-208ENST00000541259 IGHG3P01860 377 aa8.4□□□□□ -1.06
DDX55-208ENST00000541259 TFPIP10646 304 aa8.4□□□□□ -1.06
DDX55-208ENST00000541259 SFTPCP11686 197 aa8.4□□□□□ -1.06
DDX55-208ENST00000541259 IMPDH2P12268 514 aa8.4□□□□□ -1.06
DDX55-208ENST00000541259 IFI30P13284 250 aa8.4□□□□□ -1.06
DDX55-208ENST00000541259 POU2F1P14859 743 aa8.4□□□□□ -1.06
DDX55-208ENST00000541259 MAKP20794 623 aa8.4□□□□□ -1.06
DDX55-208ENST00000541259 CHMP24386 653 aa8.4□□□□□ -1.06
DDX55-208ENST00000541259 ELK4P28324 431 aa8.4□□□□□ -1.06
DDX55-208ENST00000541259 PEX2P28328 305 aa8.4□□□□□ -1.06
DDX55-208ENST00000541259 RBM34P42696 430 aaKnown RBP8.4□□□□□ -1.06
DDX55-208ENST00000541259 GPR4P46093 362 aa8.4□□□□□ -1.06
DDX55-208ENST00000541259 RPS5P46782 204 aaKnown RBP8.4□□□□□ -1.06
DDX55-208ENST00000541259 OMPP47874 163 aa8.4□□□□□ -1.06
DDX55-208ENST00000541259 LHX2P50458 406 aa8.4□□□□□ -1.06
DDX55-208ENST00000541259 DAPP51397 102 aa8.4□□□□□ -1.06
DDX55-208ENST00000541259 CLDN20P56880 219 aa8.4□□□□□ -1.06
DDX55-208ENST00000541259 RAC1P63000 192 aa8.4□□□□□ -1.06
DDX55-208ENST00000541259 PRKCDQ05655 676 aa8.4□□□□□ -1.06
DDX55-208ENST00000541259 CRYZQ08257 329 aaKnown RBP8.4□□□□□ -1.06
DDX55-208ENST00000541259 SELENBP1Q13228 472 aa8.4□□□□□ -1.06
DDX55-208ENST00000541259 TRIP10Q15642 601 aa8.4□□□□□ -1.06
DDX55-208ENST00000541259 C3AR1Q16581 482 aa8.4□□□□□ -1.06
DDX55-208ENST00000541259 LRRC36Q1X8D7 754 aa8.4□□□□□ -1.06
DDX55-208ENST00000541259 OTUD3Q5T2D3 398 aaPredicted RBP8.4□□□□□ -1.06
DDX55-208ENST00000541259 C1orf140Q5VVS0 124 aa8.4□□□□□ -1.06
DDX55-208ENST00000541259 ZNF324BQ6AW86 544 aaPredicted RBP8.4□□□□□ -1.06
DDX55-208ENST00000541259 PGBD2Q6P3X8 592 aa8.4□□□□□ -1.06
DDX55-208ENST00000541259 RRM2BQ7LG56 351 aa8.4□□□□□ -1.06
DDX55-208ENST00000541259 STK32CQ86UX6 486 aa8.4□□□□□ -1.06
DDX55-208ENST00000541259 UBQLNLQ8IYU4 475 aa8.4□□□□□ -1.06
DDX55-208ENST00000541259 SVOPLQ8N434 492 aa8.4□□□□□ -1.06
DDX55-208ENST00000541259 LRRC17Q8N6Y2 441 aa8.4□□□□□ -1.06
DDX55-208ENST00000541259 OR10G2Q8NGC3 310 aa8.4□□□□□ -1.06
DDX55-208ENST00000541259 NEIL3Q8TAT5 605 aa8.4□□□□□ -1.06
DDX55-208ENST00000541259 STK35Q8TDR2 534 aa8.4□□□□□ -1.06
DDX55-208ENST00000541259 ABTB1Q969K4 478 aaPredicted RBP8.4□□□□□ -1.06
DDX55-208ENST00000541259 SNRNP40Q96DI7 357 aaKnown RBP8.4□□□□□ -1.06
DDX55-208ENST00000541259 FAM46AQ96IP4 442 aaKnown RBP8.4□□□□□ -1.06
DDX55-208ENST00000541259 MOGAT1Q96PD6 335 aa8.4□□□□□ -1.06
DDX55-208ENST00000541259 FEVQ99581 238 aa8.4□□□□□ -1.06
DDX55-208ENST00000541259 TMEM43Q9BTV4 400 aa8.4□□□□□ -1.06
DDX55-208ENST00000541259 PTDSS2Q9BVG9 487 aa8.4□□□□□ -1.06
DDX55-208ENST00000541259 COQ10BQ9H8M1 238 aa8.4□□□□□ -1.06
DDX55-208ENST00000541259 MED31Q9Y3C7 131 aa8.4□□□□□ -1.06
DDX55-208ENST00000541259 DOCK7Q96N67 2140 aa8.39□□□□□ -1.07
DDX55-208ENST00000541259 TRAV36DV7A0A075B6V5 113 aa8.39□□□□□ -1.07
DDX55-208ENST00000541259 A0A1B0GTH9 108 aa8.39□□□□□ -1.07
DDX55-208ENST00000541259 A0A1B0GVC2 190 aa8.39□□□□□ -1.07
DDX55-208ENST00000541259 CDC42EP2O14613 210 aa8.39□□□□□ -1.07
DDX55-208ENST00000541259 TNFSF11O14788 317 aa8.39□□□□□ -1.07
DDX55-208ENST00000541259 CASQ2O14958 399 aaPredicted RBP8.39□□□□□ -1.07
DDX55-208ENST00000541259 SEC14L5O43304 696 aa8.39□□□□□ -1.07
DDX55-208ENST00000541259 CRYABP02511 175 aaKnown RBP8.39□□□□□ -1.07
DDX55-208ENST00000541259 BGLAPP02818 100 aa8.39□□□□□ -1.07
DDX55-208ENST00000541259 KLK2P20151 261 aa8.39□□□□□ -1.07
DDX55-208ENST00000541259 POU3F2P20265 443 aaPredicted RBP8.39□□□□□ -1.07
DDX55-208ENST00000541259 CTBP2P56545 445 aa8.39□□□□□ -1.07
DDX55-208ENST00000541259 CLDN18P56856 261 aa8.39□□□□□ -1.07
DDX55-208ENST00000541259 SRYQ05066 204 aa8.39□□□□□ -1.07
DDX55-208ENST00000541259 MYBPHQ13203 477 aa8.39□□□□□ -1.07
DDX55-208ENST00000541259 CTU2Q2VPK5 515 aaKnown RBP8.39□□□□□ -1.07
DDX55-208ENST00000541259 SYT14P1Q58G82 188 aa8.39□□□□□ -1.07
DDX55-208ENST00000541259 OGFRL1Q5TC84 451 aaPredicted RBP8.39□□□□□ -1.07
DDX55-208ENST00000541259 ZNF787Q6DD87 383 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms