RNA–Protein interactions for RNA: ENST00000541005.1

LTBR-208, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 583 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-208ENST00000541005 CNOT4O95628 575 aaKnown RBP11.64□□□□□ -0.55
LTBR-208ENST00000541005 LGI1O95970 557 aa11.64□□□□□ -0.55
LTBR-208ENST00000541005 PPP3CBP16298 524 aa11.64□□□□□ -0.55
LTBR-208ENST00000541005 PSMB1P20618 241 aaKnown RBP11.64□□□□□ -0.55
LTBR-208ENST00000541005 IDUAP35475 653 aa11.64□□□□□ -0.55
LTBR-208ENST00000541005 OR3A2P47893 321 aa11.64□□□□□ -0.55
LTBR-208ENST00000541005 KCNJ5P48544 419 aa11.64□□□□□ -0.55
LTBR-208ENST00000541005 CRYBA2P53672 197 aa11.64□□□□□ -0.55
LTBR-208ENST00000541005 OR2B6P58173 313 aa11.64□□□□□ -0.55
LTBR-208ENST00000541005 HOXC5Q00444 222 aa11.64□□□□□ -0.55
LTBR-208ENST00000541005 VEZF1Q14119 521 aa11.64□□□□□ -0.55
LTBR-208ENST00000541005 NRF1Q16656 503 aa11.64□□□□□ -0.55
LTBR-208ENST00000541005 FAM91A1Q658Y4 838 aa11.64□□□□□ -0.55
LTBR-208ENST00000541005 ERICH5Q6P6B1 374 aa11.64□□□□□ -0.55
LTBR-208ENST00000541005 STAC2Q6ZMT1 411 aa11.64□□□□□ -0.55
LTBR-208ENST00000541005 ARPINQ7Z6K5 226 aa11.64□□□□□ -0.55
LTBR-208ENST00000541005 TMEM200AQ86VY9 491 aa11.64□□□□□ -0.55
LTBR-208ENST00000541005 GABRG1Q8N1C3 465 aa11.64□□□□□ -0.55
LTBR-208ENST00000541005 OR52E4Q8NGH9 312 aa11.64□□□□□ -0.55
LTBR-208ENST00000541005 DNAJA4Q8WW22 397 aaPredicted RBP11.64□□□□□ -0.55
LTBR-208ENST00000541005 TAMM41Q96BW9 452 aa11.64□□□□□ -0.55
LTBR-208ENST00000541005 RCN3Q96D15 328 aa11.64□□□□□ -0.55
LTBR-208ENST00000541005 ZNF300Q96RE9 604 aaPredicted RBP11.64□□□□□ -0.55
LTBR-208ENST00000541005 ARHGDIGQ99819 225 aa11.64□□□□□ -0.55
LTBR-208ENST00000541005 ELAC2Q9BQ52 826 aaKnown RBP11.64□□□□□ -0.55
LTBR-208ENST00000541005 ECSITQ9BQ95 431 aa11.64□□□□□ -0.55
LTBR-208ENST00000541005 GPATCH1Q9BRR8 931 aaKnown RBP11.64□□□□□ -0.55
LTBR-208ENST00000541005 C12orf49Q9H741 205 aa11.64□□□□□ -0.55
LTBR-208ENST00000541005 KLHL28Q9NXS3 571 aa11.64□□□□□ -0.55
LTBR-208ENST00000541005 AP3M1Q9Y2T2 418 aa11.64□□□□□ -0.55
LTBR-208ENST00000541005 CSMD2Q7Z408 3487 aa11.64□□□□□ -0.55
LTBR-208ENST00000541005 CSMD1Q96PZ7 3565 aa11.64□□□□□ -0.55
LTBR-208ENST00000541005 ARID1AO14497 2285 aa11.63□□□□□ -0.55
LTBR-208ENST00000541005 A0A0B4J2E0 115 aa11.63□□□□□ -0.55
LTBR-208ENST00000541005 A0A1B0GWA3 101 aa11.63□□□□□ -0.55
LTBR-208ENST00000541005 A0A1B0GX12 115 aa11.63□□□□□ -0.55
LTBR-208ENST00000541005 GMNCA6NCL1 334 aa11.63□□□□□ -0.55
LTBR-208ENST00000541005 FAM220BPB1ANY3 271 aa11.63□□□□□ -0.55
LTBR-208ENST00000541005 M0QX08 132 aa11.63□□□□□ -0.55
LTBR-208ENST00000541005 RAMP1O60894 148 aa11.63□□□□□ -0.55
LTBR-208ENST00000541005 GPIP06744 558 aa11.63□□□□□ -0.55
LTBR-208ENST00000541005 PNMTP11086 282 aa11.63□□□□□ -0.55
LTBR-208ENST00000541005 COX4I1P13073 169 aa11.63□□□□□ -0.55
LTBR-208ENST00000541005 CD247P20963 164 aa11.63□□□□□ -0.55
LTBR-208ENST00000541005 NCALDP61601 193 aa11.63□□□□□ -0.55
LTBR-208ENST00000541005 EGR4Q05215 589 aa11.63□□□□□ -0.55
LTBR-208ENST00000541005 P2RY6Q15077 328 aa11.63□□□□□ -0.55
LTBR-208ENST00000541005 DUSP7Q16829 419 aa11.63□□□□□ -0.55
LTBR-208ENST00000541005 SWT1Q5T5J6 900 aaKnown RBP11.63□□□□□ -0.55
LTBR-208ENST00000541005 C1orf140Q5VVS0 124 aa11.63□□□□□ -0.55
LTBR-208ENST00000541005 C8orf82Q6P1X6 216 aaPredicted RBP11.63□□□□□ -0.55
LTBR-208ENST00000541005 ULK3Q6PHR2 472 aa11.63□□□□□ -0.55
LTBR-208ENST00000541005 C5orf46Q6UWT4 87 aa11.63□□□□□ -0.55
LTBR-208ENST00000541005 HACD2Q6Y1H2 254 aa11.63□□□□□ -0.55
LTBR-208ENST00000541005 Q6ZT83 130 aa11.63□□□□□ -0.55
LTBR-208ENST00000541005 GALNT5Q7Z7M9 940 aa11.63□□□□□ -0.55
LTBR-208ENST00000541005 RANBP3LQ86VV4 465 aaPredicted RBP11.63□□□□□ -0.55
LTBR-208ENST00000541005 TREML1Q86YW5 311 aa11.63□□□□□ -0.55
LTBR-208ENST00000541005 POU5F2Q8N7G0 328 aa11.63□□□□□ -0.55
LTBR-208ENST00000541005 SMYD1Q8NB12 490 aa11.63□□□□□ -0.55
LTBR-208ENST00000541005 GPR32P1Q8NGA4 272 aa11.63□□□□□ -0.55
LTBR-208ENST00000541005 RASSF5Q8WWW0 418 aa11.63□□□□□ -0.55
LTBR-208ENST00000541005 ZNF583Q96ND8 569 aa11.63□□□□□ -0.55
LTBR-208ENST00000541005 WFIKKN1Q96NZ8 548 aa11.63□□□□□ -0.55
LTBR-208ENST00000541005 NAA11Q9BSU3 229 aaPredicted RBP11.63□□□□□ -0.55
LTBR-208ENST00000541005 CLEC4MQ9H2X3 399 aaPredicted RBP11.63□□□□□ -0.55
LTBR-208ENST00000541005 PIF1Q9H611 641 aa11.63□□□□□ -0.55
LTBR-208ENST00000541005 RPS6KB2Q9UBS0 482 aa11.63□□□□□ -0.55
LTBR-208ENST00000541005 SLC13A4Q9UKG4 626 aa11.63□□□□□ -0.55
LTBR-208ENST00000541005 GPR52Q9Y2T5 361 aa11.63□□□□□ -0.55
LTBR-208ENST00000541005 F8P00451 2351 aa11.62□□□□□ -0.55
LTBR-208ENST00000541005 AQP7P3A6NL99 342 aa11.62□□□□□ -0.55
LTBR-208ENST00000541005 ELOA3DA6NLF2 546 aaPredicted RBP11.62□□□□□ -0.55
LTBR-208ENST00000541005 FTCDNL1E5RQL4 147 aa11.62□□□□□ -0.55
LTBR-208ENST00000541005 TPST2O60704 377 aa11.62□□□□□ -0.55
LTBR-208ENST00000541005 OPN1SWP03999 348 aa11.62□□□□□ -0.55
LTBR-208ENST00000541005 HRGP04196 525 aa11.62□□□□□ -0.55
LTBR-208ENST00000541005 FPR1P21462 350 aa11.62□□□□□ -0.55
LTBR-208ENST00000541005 CRYGSP22914 178 aa11.62□□□□□ -0.55
LTBR-208ENST00000541005 P2RY4P51582 365 aa11.62□□□□□ -0.55
LTBR-208ENST00000541005 GNGT1P63211 74 aa11.62□□□□□ -0.55
LTBR-208ENST00000541005 BNIP2Q12982 314 aa11.62□□□□□ -0.55
LTBR-208ENST00000541005 CEACAM7Q14002 265 aa11.62□□□□□ -0.55
LTBR-208ENST00000541005 SLC17A1Q14916 467 aa11.62□□□□□ -0.55
LTBR-208ENST00000541005 OR7A5Q15622 319 aa11.62□□□□□ -0.55
LTBR-208ENST00000541005 EXOC3L2Q2M3D2 409 aa11.62□□□□□ -0.55
LTBR-208ENST00000541005 ELOA3BQ3SY89 546 aa11.62□□□□□ -0.55
LTBR-208ENST00000541005 ALG10BQ5I7T1 473 aa11.62□□□□□ -0.55
LTBR-208ENST00000541005 CDH24Q86UP0 819 aa11.62□□□□□ -0.55
LTBR-208ENST00000541005 LSRQ86X29 649 aaPredicted RBP11.62□□□□□ -0.55
LTBR-208ENST00000541005 CCDC103Q8IW40 242 aa11.62□□□□□ -0.55
LTBR-208ENST00000541005 ELOA3Q8NG57 546 aa11.62□□□□□ -0.55
LTBR-208ENST00000541005 MFSD8Q8NHS3 518 aa11.62□□□□□ -0.55
LTBR-208ENST00000541005 SLC38A4Q969I6 547 aa11.62□□□□□ -0.55
LTBR-208ENST00000541005 DNAJA3Q96EY1 480 aa11.62□□□□□ -0.55
LTBR-208ENST00000541005 WFDC6Q9BQY6 131 aa11.62□□□□□ -0.55
LTBR-208ENST00000541005 MED18Q9BUE0 208 aa11.62□□□□□ -0.55
LTBR-208ENST00000541005 PTDSS2Q9BVG9 487 aa11.62□□□□□ -0.55
LTBR-208ENST00000541005 SF3B5Q9BWJ5 86 aaKnown RBP11.62□□□□□ -0.55
LTBR-208ENST00000541005 HDHD5Q9BXW7 423 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms