RNA–Protein interactions for RNA: ENST00000540747.1

YBX3-209, Transcript of Y-box binding protein 3, humanhuman

TSL 5

Gene YBX3, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-209ENST00000540747 HPS1Q92902 700 aa6.36□□□□□ -1.39
YBX3-209ENST00000540747 TMEM45BQ96B21 275 aa6.36□□□□□ -1.39
YBX3-209ENST00000540747 MOAP1Q96BY2 351 aa6.36□□□□□ -1.39
YBX3-209ENST00000540747 TRMOQ9BU70 441 aa6.36□□□□□ -1.39
YBX3-209ENST00000540747 GATA5Q9BWX5 397 aaPredicted RBP6.36□□□□□ -1.39
YBX3-209ENST00000540747 BHLHE41Q9C0J9 482 aaPredicted RBP6.36□□□□□ -1.39
YBX3-209ENST00000540747 OR11A1Q9GZK7 315 aa6.36□□□□□ -1.39
YBX3-209ENST00000540747 SAP130Q9H0E3 1048 aa6.36□□□□□ -1.39
YBX3-209ENST00000540747 C12orf65Q9H3J6 166 aaKnown RBP6.36□□□□□ -1.39
YBX3-209ENST00000540747 PLK3Q9H4B4 646 aa6.36□□□□□ -1.39
YBX3-209ENST00000540747 EXOSC3Q9NQT5 275 aaKnown RBP6.36□□□□□ -1.39
YBX3-209ENST00000540747 SERINC1Q9NRX5 453 aa6.36□□□□□ -1.39
YBX3-209ENST00000540747 KLHL14Q9P2G3 628 aa6.36□□□□□ -1.39
YBX3-209ENST00000540747 CRNNQ9UBG3 495 aaPredicted RBP6.36□□□□□ -1.39
YBX3-209ENST00000540747 GIMAP2Q9UG22 337 aa6.36□□□□□ -1.39
YBX3-209ENST00000540747 CHRNA9Q9UGM1 479 aa6.36□□□□□ -1.39
YBX3-209ENST00000540747 FAF1Q9UNN5 650 aaPredicted RBP6.36□□□□□ -1.39
YBX3-209ENST00000540747 MOKQ9UQ07 419 aa6.36□□□□□ -1.39
YBX3-209ENST00000540747 TRAPPC4Q9Y296 219 aa6.36□□□□□ -1.39
YBX3-209ENST00000540747 ARL2BPQ9Y2Y0 163 aa6.36□□□□□ -1.39
YBX3-209ENST00000540747 FKBP7Q9Y680 259 aa6.36□□□□□ -1.39
YBX3-209ENST00000540747 PIP5K1BO14986 540 aa6.35□□□□□ -1.39
YBX3-209ENST00000540747 ANKRD28O15084 1053 aa6.35□□□□□ -1.39
YBX3-209ENST00000540747 SPRY1O43609 319 aaPredicted RBP6.35□□□□□ -1.39
YBX3-209ENST00000540747 TCF21O43680 179 aa6.35□□□□□ -1.39
YBX3-209ENST00000540747 SNX3O60493 162 aa6.35□□□□□ -1.39
YBX3-209ENST00000540747 MRPL33O75394 65 aaKnown RBP6.35□□□□□ -1.39
YBX3-209ENST00000540747 STX11O75558 287 aa6.35□□□□□ -1.39
YBX3-209ENST00000540747 STAMBPO95630 424 aa6.35□□□□□ -1.39
YBX3-209ENST00000540747 AK1P00568 194 aa6.35□□□□□ -1.39
YBX3-209ENST00000540747 CSTAP01040 98 aa6.35□□□□□ -1.39
YBX3-209ENST00000540747 IGLV1-44P01699 117 aa6.35□□□□□ -1.39
YBX3-209ENST00000540747 UBTFL6P0CB48 400 aaPredicted RBP6.35□□□□□ -1.39
YBX3-209ENST00000540747 IMPDH2P12268 514 aa6.35□□□□□ -1.39
YBX3-209ENST00000540747 CPA3P15088 417 aa6.35□□□□□ -1.39
YBX3-209ENST00000540747 DDX5P17844 614 aaKnown RBP6.35□□□□□ -1.39
YBX3-209ENST00000540747 EGR1P18146 543 aa6.35□□□□□ -1.39
YBX3-209ENST00000540747 FKBP2P26885 142 aaKnown RBP6.35□□□□□ -1.39
YBX3-209ENST00000540747 MPGP29372 298 aa6.35□□□□□ -1.39
YBX3-209ENST00000540747 ALDH3A1P30838 453 aa6.35□□□□□ -1.39
YBX3-209ENST00000540747 ARRB2P32121 409 aa6.35□□□□□ -1.39
YBX3-209ENST00000540747 RPL3P39023 403 aaKnown RBP6.35□□□□□ -1.39
YBX3-209ENST00000540747 PPOXP50336 477 aa6.35□□□□□ -1.39
YBX3-209ENST00000540747 P2RY4P51582 365 aa6.35□□□□□ -1.39
YBX3-209ENST00000540747 CDH15P55291 814 aa6.35□□□□□ -1.39
YBX3-209ENST00000540747 RPS26P62854 115 aaKnown RBP6.35□□□□□ -1.39
YBX3-209ENST00000540747 HBA1P69905 142 aa6.35□□□□□ -1.39
YBX3-209ENST00000540747 SF3A3Q12874 501 aaKnown RBP eCLIP6.35□□□□□ -1.39
YBX3-209ENST00000540747 RIN1Q13671 783 aa6.35□□□□□ -1.39
YBX3-209ENST00000540747 PCLAFQ15004 111 aa6.35□□□□□ -1.39
YBX3-209ENST00000540747 SNCBQ16143 134 aa6.35□□□□□ -1.39
YBX3-209ENST00000540747 ARHGAP11BQ3KRB8 267 aa6.35□□□□□ -1.39
YBX3-209ENST00000540747 C3orf36Q3SXR2 165 aa6.35□□□□□ -1.39
YBX3-209ENST00000540747 CCDC153Q494R4 210 aa6.35□□□□□ -1.39
YBX3-209ENST00000540747 CFAP157Q5JU67 520 aa6.35□□□□□ -1.39
YBX3-209ENST00000540747 TYW3Q6IPR3 259 aaKnown RBP6.35□□□□□ -1.39
YBX3-209ENST00000540747 CASP12Q6UXS9 341 aa6.35□□□□□ -1.39
YBX3-209ENST00000540747 EIF3MQ7L2H7 374 aaKnown RBP6.35□□□□□ -1.39
YBX3-209ENST00000540747 GRINAQ7Z429 371 aa6.35□□□□□ -1.39
YBX3-209ENST00000540747 SPATA21Q7Z572 469 aa6.35□□□□□ -1.39
YBX3-209ENST00000540747 KRTCAP2Q8N6L1 136 aa6.35□□□□□ -1.39
YBX3-209ENST00000540747 NATD1Q8N6N6 113 aa6.35□□□□□ -1.39
YBX3-209ENST00000540747 OR5AK3PQ8NH89 298 aa6.35□□□□□ -1.39
YBX3-209ENST00000540747 ZFAND2BQ8WV99 257 aa6.35□□□□□ -1.39
YBX3-209ENST00000540747 TWIST2Q8WVJ9 160 aa6.35□□□□□ -1.39
YBX3-209ENST00000540747 FBXO17Q96EF6 278 aa6.35□□□□□ -1.39
YBX3-209ENST00000540747 ZHX1-C8orf76Q96EF9 292 aa6.35□□□□□ -1.39
YBX3-209ENST00000540747 KATNB1Q9BVA0 655 aa6.35□□□□□ -1.39
YBX3-209ENST00000540747 NELFAQ9H3P2 528 aa6.35□□□□□ -1.39
YBX3-209ENST00000540747 OBP2BQ9NPH6 170 aa6.35□□□□□ -1.39
YBX3-209ENST00000540747 CA10Q9NS85 328 aa6.35□□□□□ -1.39
YBX3-209ENST00000540747 TMEM181Q9P2C4 612 aa6.35□□□□□ -1.39
YBX3-209ENST00000540747 SLC9A8Q9Y2E8 581 aa6.35□□□□□ -1.39
YBX3-209ENST00000540747 SPIN1Q9Y657 262 aaPredicted RBP6.35□□□□□ -1.39
YBX3-209ENST00000540747 DYSFO75923 2080 aa6.34□□□□□ -1.39
YBX3-209ENST00000540747 ARPC4-TTLL3A0A0A6YYG9 625 aa6.34□□□□□ -1.39
YBX3-209ENST00000540747 TMEM129A0AVI4 362 aa6.34□□□□□ -1.39
YBX3-209ENST00000540747 PRAMEF27A3QJZ7 478 aa6.34□□□□□ -1.39
YBX3-209ENST00000540747 LRP5LA4QPB2 252 aa6.34□□□□□ -1.39
YBX3-209ENST00000540747 TMEM114B3SHH9 223 aa6.34□□□□□ -1.39
YBX3-209ENST00000540747 B9A039 149 aa6.34□□□□□ -1.39
YBX3-209ENST00000540747 FAAHO00519 579 aa6.34□□□□□ -1.39
YBX3-209ENST00000540747 ZNF208O43345 1280 aa6.34□□□□□ -1.39
YBX3-209ENST00000540747 EIF1BO60739 113 aaKnown RBP6.34□□□□□ -1.39
YBX3-209ENST00000540747 SCN2BO60939 215 aa6.34□□□□□ -1.39
YBX3-209ENST00000540747 SPAG7O75391 227 aa6.34□□□□□ -1.39
YBX3-209ENST00000540747 LYPLA1O75608 230 aaPredicted RBP6.34□□□□□ -1.39
YBX3-209ENST00000540747 VENTXO95231 258 aa6.34□□□□□ -1.39
YBX3-209ENST00000540747 CHRNGP07510 517 aa6.34□□□□□ -1.39
YBX3-209ENST00000540747 CREB1P16220 341 aa6.34□□□□□ -1.39
YBX3-209ENST00000540747 CALCRP30988 508 aa6.34□□□□□ -1.39
YBX3-209ENST00000540747 SERPINF1P36955 418 aa6.34□□□□□ -1.39
YBX3-209ENST00000540747 MAGEA8P43361 318 aa6.34□□□□□ -1.39
YBX3-209ENST00000540747 KHKP50053 298 aa6.34□□□□□ -1.39
YBX3-209ENST00000540747 IDH3GP51553 393 aaPredicted RBP6.34□□□□□ -1.39
YBX3-209ENST00000540747 SLC18A1P54219 525 aa6.34□□□□□ -1.39
YBX3-209ENST00000540747 PRPS1P60891 318 aa6.34□□□□□ -1.39
YBX3-209ENST00000540747 SNRPD2P62316 118 aaKnown RBP6.34□□□□□ -1.39
YBX3-209ENST00000540747 TGFBR3Q03167 851 aa6.34□□□□□ -1.39
YBX3-209ENST00000540747 HGFACQ04756 655 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms