RNA–Protein interactions for RNA: ENST00000540669.1

VPS33A-204, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 3

Gene VPS33A, Length 455 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-204ENST00000540669 PEX2P28328 305 aa9.48□□□□□ -0.89
VPS33A-204ENST00000540669 UQCRC1P31930 480 aa9.48□□□□□ -0.89
VPS33A-204ENST00000540669 PLGLB1Q02325 96 aa9.48□□□□□ -0.89
VPS33A-204ENST00000540669 SLC34A1Q06495 639 aa9.48□□□□□ -0.89
VPS33A-204ENST00000540669 GTF3C1Q12789 2109 aa9.48□□□□□ -0.89
VPS33A-204ENST00000540669 PPP1R8Q12972 351 aaKnown RBP9.48□□□□□ -0.89
VPS33A-204ENST00000540669 LAPTM4AQ15012 233 aa9.48□□□□□ -0.89
VPS33A-204ENST00000540669 ELOA3BQ3SY89 546 aa9.48□□□□□ -0.89
VPS33A-204ENST00000540669 PRR30Q53SZ7 412 aaPredicted RBP9.48□□□□□ -0.89
VPS33A-204ENST00000540669 FGD3Q5JSP0 725 aa9.48□□□□□ -0.89
VPS33A-204ENST00000540669 C1orf140Q5VVS0 124 aa9.48□□□□□ -0.89
VPS33A-204ENST00000540669 C1QL3Q5VWW1 255 aa9.48□□□□□ -0.89
VPS33A-204ENST00000540669 KDM4DQ6B0I6 523 aa9.48□□□□□ -0.89
VPS33A-204ENST00000540669 TBPL2Q6SJ96 375 aa9.48□□□□□ -0.89
VPS33A-204ENST00000540669 NHLRC1Q6VVB1 395 aa9.48□□□□□ -0.89
VPS33A-204ENST00000540669 HIPK1Q86Z02 1210 aa9.48□□□□□ -0.89
VPS33A-204ENST00000540669 NRMQ8IXM6 262 aa9.48□□□□□ -0.89
VPS33A-204ENST00000540669 PARP8Q8N3A8 854 aa9.48□□□□□ -0.89
VPS33A-204ENST00000540669 CLDN22Q8N7P3 220 aa9.48□□□□□ -0.89
VPS33A-204ENST00000540669 ELOA3Q8NG57 546 aa9.48□□□□□ -0.89
VPS33A-204ENST00000540669 OR10G2Q8NGC3 310 aa9.48□□□□□ -0.89
VPS33A-204ENST00000540669 OR9Q2Q8NGE9 314 aa9.48□□□□□ -0.89
VPS33A-204ENST00000540669 OR5M1Q8NGP8 315 aa9.48□□□□□ -0.89
VPS33A-204ENST00000540669 PFN4Q8NHR9 129 aa9.48□□□□□ -0.89
VPS33A-204ENST00000540669 MFSD8Q8NHS3 518 aa9.48□□□□□ -0.89
VPS33A-204ENST00000540669 FAR1Q8WVX9 515 aa9.48□□□□□ -0.89
VPS33A-204ENST00000540669 KTI12Q96EK9 354 aaPredicted RBP9.48□□□□□ -0.89
VPS33A-204ENST00000540669 KLHL15Q96M94 604 aa9.48□□□□□ -0.89
VPS33A-204ENST00000540669 JSRP1Q96MG2 331 aaPredicted RBP9.48□□□□□ -0.89
VPS33A-204ENST00000540669 SFXN2Q96NB2 322 aa9.48□□□□□ -0.89
VPS33A-204ENST00000540669 OR11A1Q9GZK7 315 aa9.48□□□□□ -0.89
VPS33A-204ENST00000540669 RPS6KB2Q9UBS0 482 aa9.48□□□□□ -0.89
VPS33A-204ENST00000540669 TMEM5Q9Y2B1 443 aa9.48□□□□□ -0.89
VPS33A-204ENST00000540669 HDGFL3Q9Y3E1 203 aa9.48□□□□□ -0.89
VPS33A-204ENST00000540669 MAGED1Q9Y5V3 778 aaPredicted RBP9.48□□□□□ -0.89
VPS33A-204ENST00000540669 SPIN1Q9Y657 262 aaPredicted RBP9.48□□□□□ -0.89
VPS33A-204ENST00000540669 FLNCQ14315 2725 aa9.48□□□□□ -0.89
VPS33A-204ENST00000540669 ARHGAP21Q5T5U3 1957 aa9.48□□□□□ -0.89
VPS33A-204ENST00000540669 TRGV5A0A0B4J1U4 118 aa9.47□□□□□ -0.89
VPS33A-204ENST00000540669 A0A0J9YW62 118 aa9.47□□□□□ -0.89
VPS33A-204ENST00000540669 LIPT2A6NK58 231 aa9.47□□□□□ -0.89
VPS33A-204ENST00000540669 PMS2P2O95744 297 aa9.47□□□□□ -0.89
VPS33A-204ENST00000540669 MT-ATP6P00846 226 aa9.47□□□□□ -0.89
VPS33A-204ENST00000540669 BMP7P18075 431 aa9.47□□□□□ -0.89
VPS33A-204ENST00000540669 MAKP20794 623 aa9.47□□□□□ -0.89
VPS33A-204ENST00000540669 CXCR1P25024 350 aa9.47□□□□□ -0.89
VPS33A-204ENST00000540669 IFNA8P32881 189 aa9.47□□□□□ -0.89
VPS33A-204ENST00000540669 CLDN20P56880 219 aa9.47□□□□□ -0.89
VPS33A-204ENST00000540669 ALDH6A1Q02252 535 aaKnown RBP9.47□□□□□ -0.89
VPS33A-204ENST00000540669 MYBPHQ13203 477 aa9.47□□□□□ -0.89
VPS33A-204ENST00000540669 SLC10A1Q14973 349 aa9.47□□□□□ -0.89
VPS33A-204ENST00000540669 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.47□□□□□ -0.89
VPS33A-204ENST00000540669 EMC4Q5J8M3 183 aa9.47□□□□□ -0.89
VPS33A-204ENST00000540669 FAM69AQ5T7M9 428 aa9.47□□□□□ -0.89
VPS33A-204ENST00000540669 ANKRD34AQ69YU3 496 aa9.47□□□□□ -0.89
VPS33A-204ENST00000540669 ABLIM2Q6H8Q1 611 aa9.47□□□□□ -0.89
VPS33A-204ENST00000540669 PPP4R4Q6NUP7 873 aa9.47□□□□□ -0.89
VPS33A-204ENST00000540669 FAM180AQ6UWF9 173 aa9.47□□□□□ -0.89
VPS33A-204ENST00000540669 ESPNLQ6ZVH7 1005 aa9.47□□□□□ -0.89
VPS33A-204ENST00000540669 PACRGLQ8N7B6 248 aa9.47□□□□□ -0.89
VPS33A-204ENST00000540669 SCAIQ8N9R8 606 aa9.47□□□□□ -0.89
VPS33A-204ENST00000540669 OR14L1PQ8NHC6 308 aa9.47□□□□□ -0.89
VPS33A-204ENST00000540669 DNAJC9Q8WXX5 260 aa9.47□□□□□ -0.89
VPS33A-204ENST00000540669 TAAR8Q969N4 342 aa9.47□□□□□ -0.89
VPS33A-204ENST00000540669 SNRNP40Q96DI7 357 aaKnown RBP9.47□□□□□ -0.89
VPS33A-204ENST00000540669 WDYHV1Q96HA8 205 aa9.47□□□□□ -0.89
VPS33A-204ENST00000540669 MOGAT1Q96PD6 335 aa9.47□□□□□ -0.89
VPS33A-204ENST00000540669 UCN2Q96RP3 112 aa9.47□□□□□ -0.89
VPS33A-204ENST00000540669 TMUB1Q9BVT8 246 aa9.47□□□□□ -0.89
VPS33A-204ENST00000540669 RASSF4Q9H2L5 321 aa9.47□□□□□ -0.89
VPS33A-204ENST00000540669 FKRPQ9H9S5 495 aa9.47□□□□□ -0.89
VPS33A-204ENST00000540669 C8orf4Q9NR00 106 aa9.47□□□□□ -0.89
VPS33A-204ENST00000540669 LUZP4Q9P127 313 aa9.47□□□□□ -0.89
VPS33A-204ENST00000540669 REV1Q9UBZ9 1251 aa9.47□□□□□ -0.89
VPS33A-204ENST00000540669 TRAPPC4Q9Y296 219 aa9.47□□□□□ -0.89
VPS33A-204ENST00000540669 RPH3AQ9Y2J0 694 aaPredicted RBP9.47□□□□□ -0.89
VPS33A-204ENST00000540669 HIF3AQ9Y2N7 669 aa9.47□□□□□ -0.89
VPS33A-204ENST00000540669 SLC6A5Q9Y345 797 aa9.47□□□□□ -0.89
VPS33A-204ENST00000540669 MED31Q9Y3C7 131 aa9.47□□□□□ -0.89
VPS33A-204ENST00000540669 U3KQV3 271 aa9.47□□□□□ -0.89
VPS33A-204ENST00000540669 DOCK7Q96N67 2140 aa9.47□□□□□ -0.89
VPS33A-204ENST00000540669 LOC102725191A0A1B0GVB3 256 aa9.46□□□□□ -0.9
VPS33A-204ENST00000540669 A0A1W2PNV4 684 aa9.46□□□□□ -0.9
VPS33A-204ENST00000540669 NPIPB13A6NJU9 1138 aa9.46□□□□□ -0.9
VPS33A-204ENST00000540669 NPIPB4C9JG80 1138 aa9.46□□□□□ -0.9
VPS33A-204ENST00000540669 H0YC42 278 aa9.46□□□□□ -0.9
VPS33A-204ENST00000540669 SOCS2O14508 198 aa9.46□□□□□ -0.9
VPS33A-204ENST00000540669 EI24O14681 340 aa9.46□□□□□ -0.9
VPS33A-204ENST00000540669 C1QL1O75973 258 aa9.46□□□□□ -0.9
VPS33A-204ENST00000540669 OR7A10O76100 309 aa9.46□□□□□ -0.9
VPS33A-204ENST00000540669 CCNB2O95067 398 aa9.46□□□□□ -0.9
VPS33A-204ENST00000540669 PEPDP12955 493 aa9.46□□□□□ -0.9
VPS33A-204ENST00000540669 SLC9A3P48764 834 aa9.46□□□□□ -0.9
VPS33A-204ENST00000540669 DAPP51397 102 aa9.46□□□□□ -0.9
VPS33A-204ENST00000540669 AGFG1P52594 562 aaKnown RBP9.46□□□□□ -0.9
VPS33A-204ENST00000540669 SUCLG1P53597 346 aaKnown RBP9.46□□□□□ -0.9
VPS33A-204ENST00000540669 TPD52P55327 224 aaPredicted RBP9.46□□□□□ -0.9
VPS33A-204ENST00000540669 TLE1Q04724 770 aa9.46□□□□□ -0.9
VPS33A-204ENST00000540669 TSPAN31Q12999 210 aa9.46□□□□□ -0.9
VPS33A-204ENST00000540669 DAG1Q14118 895 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms