RNA–Protein interactions for RNA: ENST00000540608.5

NPC1-202, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 2,790 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-202ENST00000540608 GMDSO60547 372 aa11.3□□□□□ -0.6
NPC1-202ENST00000540608 PRAF2O60831 178 aa11.3□□□□□ -0.6
NPC1-202ENST00000540608 GPR75O95800 540 aa11.3□□□□□ -0.6
NPC1-202ENST00000540608 ECDO95905 644 aaPredicted RBP11.3□□□□□ -0.6
NPC1-202ENST00000540608 CA3P07451 260 aa11.3□□□□□ -0.6
NPC1-202ENST00000540608 EDNRAP25101 427 aa11.3□□□□□ -0.6
NPC1-202ENST00000540608 GPM6BQ13491 265 aa11.3□□□□□ -0.6
NPC1-202ENST00000540608 KIR2DS3Q14952 304 aa11.3□□□□□ -0.6
NPC1-202ENST00000540608 EXOSC7Q15024 291 aaKnown RBP11.3□□□□□ -0.6
NPC1-202ENST00000540608 ZSWIM7Q19AV6 140 aa11.3□□□□□ -0.6
NPC1-202ENST00000540608 SFRP4Q6FHJ7 346 aaPredicted RBP11.3□□□□□ -0.6
NPC1-202ENST00000540608 FAM109BQ6ICB4 259 aaPredicted RBP11.3□□□□□ -0.6
NPC1-202ENST00000540608 ZAR1Q86SH2 424 aa11.3□□□□□ -0.6
NPC1-202ENST00000540608 CAMKVQ8NCB2 501 aa11.3□□□□□ -0.6
NPC1-202ENST00000540608 SDR9C7Q8NEX9 313 aa11.3□□□□□ -0.6
NPC1-202ENST00000540608 OR11G2Q8NGC1 345 aa11.3□□□□□ -0.6
NPC1-202ENST00000540608 OR2T35Q8NGX2 323 aa11.3□□□□□ -0.6
NPC1-202ENST00000540608 OR14A16Q8NHC5 309 aa11.3□□□□□ -0.6
NPC1-202ENST00000540608 OR14C36Q8NHC7 312 aa11.3□□□□□ -0.6
NPC1-202ENST00000540608 LRRC20Q8TCA0 184 aa11.3□□□□□ -0.6
NPC1-202ENST00000540608 PTCHD1Q96NR3 888 aa11.3□□□□□ -0.6
NPC1-202ENST00000540608 RBP7Q96R05 134 aa11.3□□□□□ -0.6
NPC1-202ENST00000540608 TMEM106CQ9BVX2 250 aa11.3□□□□□ -0.6
NPC1-202ENST00000540608 C1QTNF7Q9BXJ2 289 aa11.3□□□□□ -0.6
NPC1-202ENST00000540608 TRIM2Q9C040 744 aa11.3□□□□□ -0.6
NPC1-202ENST00000540608 TRPV4Q9HBA0 871 aa11.3□□□□□ -0.6
NPC1-202ENST00000540608 OBP2AQ9NY56 170 aa11.3□□□□□ -0.6
NPC1-202ENST00000540608 NKIRAS2Q9NYR9 191 aa11.3□□□□□ -0.6
NPC1-202ENST00000540608 GDE1Q9NZC3 331 aa11.3□□□□□ -0.6
NPC1-202ENST00000540608 PRSS38A1L453 326 aa11.3□□□□□ -0.6
NPC1-202ENST00000540608 NAP1L6A6NFF2 107 aa11.3□□□□□ -0.6
NPC1-202ENST00000540608 ZNF860A6NHJ4 632 aa11.3□□□□□ -0.6
NPC1-202ENST00000540608 I3L521 148 aa11.3□□□□□ -0.6
NPC1-202ENST00000540608 PSMB1P20618 241 aaKnown RBP11.3□□□□□ -0.6
NPC1-202ENST00000540608 LCN1P31025 176 aa11.3□□□□□ -0.6
NPC1-202ENST00000540608 ACAA2P42765 397 aaKnown RBP11.3□□□□□ -0.6
NPC1-202ENST00000540608 SELENOPP49908 381 aa11.3□□□□□ -0.6
NPC1-202ENST00000540608 EPHA4P54764 986 aa11.3□□□□□ -0.6
NPC1-202ENST00000540608 FCRL6Q6DN72 434 aa11.3□□□□□ -0.6
NPC1-202ENST00000540608 FAM199XQ6PEV8 388 aaPredicted RBP11.3□□□□□ -0.6
NPC1-202ENST00000540608 LINC00114Q6XXX2 140 aa11.3□□□□□ -0.6
NPC1-202ENST00000540608 LINGO2Q7L985 606 aa11.3□□□□□ -0.6
NPC1-202ENST00000540608 COMMD7Q86VX2 200 aa11.3□□□□□ -0.6
NPC1-202ENST00000540608 GRAMD2AQ8IUY3 354 aa11.3□□□□□ -0.6
NPC1-202ENST00000540608 TMEFF1Q8IYR6 380 aa11.3□□□□□ -0.6
NPC1-202ENST00000540608 FAM71CQ8NEG0 241 aa11.3□□□□□ -0.6
NPC1-202ENST00000540608 DERL3Q96Q80 235 aa11.3□□□□□ -0.6
NPC1-202ENST00000540608 PDCD1LG2Q9BQ51 273 aa11.3□□□□□ -0.6
NPC1-202ENST00000540608 METTL17Q9H7H0 456 aaPredicted RBP11.3□□□□□ -0.6
NPC1-202ENST00000540608 SFXN1Q9H9B4 322 aa11.3□□□□□ -0.6
NPC1-202ENST00000540608 GNG8Q9UK08 70 aa11.3□□□□□ -0.6
NPC1-202ENST00000540608 GABARAPH6UMI1 98 aa11.29□□□□□ -0.6
NPC1-202ENST00000540608 PDCD5O14737 125 aa11.29□□□□□ -0.6
NPC1-202ENST00000540608 GPRIN2O60269 458 aa11.29□□□□□ -0.6
NPC1-202ENST00000540608 ADRB1P08588 477 aa11.29□□□□□ -0.6
NPC1-202ENST00000540608 IFI6P09912 130 aa11.29□□□□□ -0.6
NPC1-202ENST00000540608 SDHBP21912 280 aa11.29□□□□□ -0.6
NPC1-202ENST00000540608 NAA10P41227 235 aaPredicted RBP11.29□□□□□ -0.6
NPC1-202ENST00000540608 DIO1P49895 249 aa11.29□□□□□ -0.6
NPC1-202ENST00000540608 VSX2P58304 361 aaPredicted RBP11.29□□□□□ -0.6
NPC1-202ENST00000540608 CRYZQ08257 329 aaKnown RBP11.29□□□□□ -0.6
NPC1-202ENST00000540608 PON3Q15166 354 aa11.29□□□□□ -0.6
NPC1-202ENST00000540608 ALG10BQ5I7T1 473 aa11.29□□□□□ -0.6
NPC1-202ENST00000540608 ELFN2Q5R3F8 820 aa11.29□□□□□ -0.6
NPC1-202ENST00000540608 NUDT18Q6ZVK8 323 aa11.29□□□□□ -0.6
NPC1-202ENST00000540608 HDDC2Q7Z4H3 204 aa11.29□□□□□ -0.6
NPC1-202ENST00000540608 SHISA5Q8N114 240 aa11.29□□□□□ -0.6
NPC1-202ENST00000540608 EID2Q8N6I1 236 aa11.29□□□□□ -0.6
NPC1-202ENST00000540608 LSMEM1Q8N8F7 131 aa11.29□□□□□ -0.6
NPC1-202ENST00000540608 TMEM52Q8NDY8 209 aa11.29□□□□□ -0.6
NPC1-202ENST00000540608 C7orf57Q8NEG2 295 aa11.29□□□□□ -0.6
NPC1-202ENST00000540608 OR51L1Q8NGJ5 315 aa11.29□□□□□ -0.6
NPC1-202ENST00000540608 CCDC86Q9H6F5 360 aaKnown RBP11.29□□□□□ -0.6
NPC1-202ENST00000540608 NOX4Q9NPH5 578 aa11.29□□□□□ -0.6
NPC1-202ENST00000540608 NPDC1Q9NQX5 325 aaPredicted RBP11.29□□□□□ -0.6
NPC1-202ENST00000540608 ANKRD10Q9NXR5 420 aa11.29□□□□□ -0.6
NPC1-202ENST00000540608 MRPL15Q9P015 296 aaKnown RBP11.29□□□□□ -0.6
NPC1-202ENST00000540608 NCDNQ9UBB6 729 aa11.29□□□□□ -0.6
NPC1-202ENST00000540608 PILRAQ9UKJ1 303 aa11.29□□□□□ -0.6
NPC1-202ENST00000540608 FLVCR2Q9UPI3 526 aa11.29□□□□□ -0.6
NPC1-202ENST00000540608 RCE1Q9Y256 329 aa11.29□□□□□ -0.6
NPC1-202ENST00000540608 IER3IP1Q9Y5U9 82 aa11.29□□□□□ -0.6
NPC1-202ENST00000540608 SPACA6W5XKT8 324 aa11.29□□□□□ -0.6
NPC1-202ENST00000540608 IFITM5A6NNB3 132 aa11.29□□□□□ -0.6
NPC1-202ENST00000540608 CYR61O00622 381 aa11.29□□□□□ -0.6
NPC1-202ENST00000540608 PIN1P1O15428 100 aa11.29□□□□□ -0.6
NPC1-202ENST00000540608 PLRG1O43660 514 aaKnown RBP11.29□□□□□ -0.6
NPC1-202ENST00000540608 ADAM11O75078 769 aa11.29□□□□□ -0.6
NPC1-202ENST00000540608 TMEM127O75204 238 aa11.29□□□□□ -0.6
NPC1-202ENST00000540608 NKX2-2O95096 273 aa11.29□□□□□ -0.6
NPC1-202ENST00000540608 NDUFB2O95178 105 aa11.29□□□□□ -0.6
NPC1-202ENST00000540608 APODP05090 189 aa11.29□□□□□ -0.6
NPC1-202ENST00000540608 CT62P0C5K7 136 aa11.29□□□□□ -0.6
NPC1-202ENST00000540608 BLVRAP53004 296 aa11.29□□□□□ -0.6
NPC1-202ENST00000540608 AP3S2P59780 193 aa11.29□□□□□ -0.6
NPC1-202ENST00000540608 RAB14P61106 215 aa11.29□□□□□ -0.6
NPC1-202ENST00000540608 LGALS3BPQ08380 585 aa11.29□□□□□ -0.6
NPC1-202ENST00000540608 ILF3Q12906 894 aaKnown RBP eCLIP11.29□□□□□ -0.6
NPC1-202ENST00000540608 METTL11BQ5VVY1 283 aa11.29□□□□□ -0.6
NPC1-202ENST00000540608 ZNF776Q68DI1 518 aaPredicted RBP11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms