RNA–Protein interactions for RNA: ENST00000540022.5

TNFRSF1A-213, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,527 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-213ENST00000540022 IGHG3P01860 377 aa17.03■□□□□ 0.32
TNFRSF1A-213ENST00000540022 TFPIP10646 304 aa17.03■□□□□ 0.32
TNFRSF1A-213ENST00000540022 POU2F1P14859 743 aa17.03■□□□□ 0.32
TNFRSF1A-213ENST00000540022 MAKP20794 623 aa17.03■□□□□ 0.32
TNFRSF1A-213ENST00000540022 SFTPDP35247 375 aa17.03■□□□□ 0.32
TNFRSF1A-213ENST00000540022 GPR4P46093 362 aa17.03■□□□□ 0.32
TNFRSF1A-213ENST00000540022 RPS5P46782 204 aaKnown RBP17.03■□□□□ 0.32
TNFRSF1A-213ENST00000540022 PTDSS1P48651 473 aaKnown RBP17.03■□□□□ 0.32
TNFRSF1A-213ENST00000540022 DAPP51397 102 aa17.03■□□□□ 0.32
TNFRSF1A-213ENST00000540022 PPP2R2BQ00005 443 aa17.03■□□□□ 0.32
TNFRSF1A-213ENST00000540022 TLE1Q04724 770 aa17.03■□□□□ 0.32
TNFRSF1A-213ENST00000540022 TMEM176BQ3YBM2 270 aaPredicted RBP17.03■□□□□ 0.32
TNFRSF1A-213ENST00000540022 C1orf140Q5VVS0 124 aa17.03■□□□□ 0.32
TNFRSF1A-213ENST00000540022 C1orf94Q6P1W5 598 aa17.03■□□□□ 0.32
TNFRSF1A-213ENST00000540022 FAHD1Q6P587 224 aa17.03■□□□□ 0.32
TNFRSF1A-213ENST00000540022 SMPDL3BQ92485 455 aa17.03■□□□□ 0.32
TNFRSF1A-213ENST00000540022 TAAR8Q969N4 342 aa17.03■□□□□ 0.32
TNFRSF1A-213ENST00000540022 DDIT4LQ96D03 193 aa17.03■□□□□ 0.32
TNFRSF1A-213ENST00000540022 BPIFA2Q96DR5 249 aa17.03■□□□□ 0.32
TNFRSF1A-213ENST00000540022 PTDSS2Q9BVG9 487 aa17.03■□□□□ 0.32
TNFRSF1A-213ENST00000540022 OSBPL10Q9BXB5 764 aa17.03■□□□□ 0.32
TNFRSF1A-213ENST00000540022 KLHL4Q9C0H6 718 aa17.03■□□□□ 0.32
TNFRSF1A-213ENST00000540022 LDAHQ9H6V9 325 aa17.03■□□□□ 0.32
TNFRSF1A-213ENST00000540022 NPIPA1Q9UND3 350 aa17.03■□□□□ 0.32
TNFRSF1A-213ENST00000540022 NCKAP5O14513 1909 aa17.02■□□□□ 0.32
TNFRSF1A-213ENST00000540022 PRRC2CQ9Y520 2896 aaKnown RBP17.02■□□□□ 0.32
TNFRSF1A-213ENST00000540022 TRAV36DV7A0A075B6V5 113 aa17.02■□□□□ 0.32
TNFRSF1A-213ENST00000540022 LINC01387J3KSC0 135 aa17.02■□□□□ 0.32
TNFRSF1A-213ENST00000540022 KLF4O43474 513 aa17.02■□□□□ 0.32
TNFRSF1A-213ENST00000540022 CRYABP02511 175 aaKnown RBP17.02■□□□□ 0.32
TNFRSF1A-213ENST00000540022 ANXA8P13928 327 aa17.02■□□□□ 0.32
TNFRSF1A-213ENST00000540022 BMP7P18075 431 aa17.02■□□□□ 0.32
TNFRSF1A-213ENST00000540022 FKBP2P26885 142 aaKnown RBP17.02■□□□□ 0.32
TNFRSF1A-213ENST00000540022 IFNGR2P38484 337 aa17.02■□□□□ 0.32
TNFRSF1A-213ENST00000540022 CLDN20P56880 219 aa17.02■□□□□ 0.32
TNFRSF1A-213ENST00000540022 LTBQ06643 244 aa17.02■□□□□ 0.32
TNFRSF1A-213ENST00000540022 FAM180AQ6UWF9 173 aa17.02■□□□□ 0.32
TNFRSF1A-213ENST00000540022 C5orf46Q6UWT4 87 aa17.02■□□□□ 0.32
TNFRSF1A-213ENST00000540022 CISD2Q8N5K1 135 aaKnown RBP17.02■□□□□ 0.32
TNFRSF1A-213ENST00000540022 ATG16L2Q8NAA4 619 aa17.02■□□□□ 0.32
TNFRSF1A-213ENST00000540022 GTPBP3Q969Y2 492 aaKnown RBP17.02■□□□□ 0.32
TNFRSF1A-213ENST00000540022 SGTBQ96EQ0 304 aa17.02■□□□□ 0.32
TNFRSF1A-213ENST00000540022 POTEKPQ9BYX7 375 aa17.02■□□□□ 0.32
TNFRSF1A-213ENST00000540022 MGAT4BQ9UQ53 548 aa17.02■□□□□ 0.32
TNFRSF1A-213ENST00000540022 SHANK1Q9Y566 2161 aa17.02■□□□□ 0.31
TNFRSF1A-213ENST00000540022 A0A1W2PNR3 127 aa17.01■□□□□ 0.31
TNFRSF1A-213ENST00000540022 H0YC42 278 aa17.01■□□□□ 0.31
TNFRSF1A-213ENST00000540022 CDC42EP2O14613 210 aa17.01■□□□□ 0.31
TNFRSF1A-213ENST00000540022 HCN1O60741 890 aa17.01■□□□□ 0.31
TNFRSF1A-213ENST00000540022 AHSA1O95433 338 aa17.01■□□□□ 0.31
TNFRSF1A-213ENST00000540022 CH25HO95992 272 aa17.01■□□□□ 0.31
TNFRSF1A-213ENST00000540022 IGF2P01344 180 aa17.01■□□□□ 0.31
TNFRSF1A-213ENST00000540022 ZNF26P17031 533 aaPredicted RBP17.01■□□□□ 0.31
TNFRSF1A-213ENST00000540022 FUT1P19526 365 aa17.01■□□□□ 0.31
TNFRSF1A-213ENST00000540022 POU3F2P20265 443 aaPredicted RBP17.01■□□□□ 0.31
TNFRSF1A-213ENST00000540022 LHX2P50458 406 aa17.01■□□□□ 0.31
TNFRSF1A-213ENST00000540022 TPD52P55327 224 aaPredicted RBP17.01■□□□□ 0.31
TNFRSF1A-213ENST00000540022 DAG1Q14118 895 aa17.01■□□□□ 0.31
TNFRSF1A-213ENST00000540022 SNCBQ16143 134 aa17.01■□□□□ 0.31
TNFRSF1A-213ENST00000540022 PPP4R4Q6NUP7 873 aa17.01■□□□□ 0.31
TNFRSF1A-213ENST00000540022 TMPRSS11FQ6ZWK6 438 aa17.01■□□□□ 0.31
TNFRSF1A-213ENST00000540022 SLC46A3Q7Z3Q1 461 aa17.01■□□□□ 0.31
TNFRSF1A-213ENST00000540022 GGNQ86UU5 652 aa17.01■□□□□ 0.31
TNFRSF1A-213ENST00000540022 MAGEE2Q8TD90 523 aaPredicted RBP17.01■□□□□ 0.31
TNFRSF1A-213ENST00000540022 ABTB1Q969K4 478 aaPredicted RBP17.01■□□□□ 0.31
TNFRSF1A-213ENST00000540022 KLHL15Q96M94 604 aa17.01■□□□□ 0.31
TNFRSF1A-213ENST00000540022 MOGAT1Q96PD6 335 aa17.01■□□□□ 0.31
TNFRSF1A-213ENST00000540022 OR5B2Q96R09 309 aa17.01■□□□□ 0.31
TNFRSF1A-213ENST00000540022 RBM4BQ9BQ04 359 aaKnown RBP17.01■□□□□ 0.31
TNFRSF1A-213ENST00000540022 RBM4Q9BWF3 364 aaKnown RBP17.01■□□□□ 0.31
TNFRSF1A-213ENST00000540022 DGCR6LQ9BY27 220 aa17.01■□□□□ 0.31
TNFRSF1A-213ENST00000540022 EXO5Q9H790 373 aa17.01■□□□□ 0.31
TNFRSF1A-213ENST00000540022 KRCC1Q9NPI7 259 aaPredicted RBP17.01■□□□□ 0.31
TNFRSF1A-213ENST00000540022 PLSCR2Q9NRY7 297 aa17.01■□□□□ 0.31
TNFRSF1A-213ENST00000540022 SPRR3Q9UBC9 169 aa17.01■□□□□ 0.31
TNFRSF1A-213ENST00000540022 TNFRSF10DQ9UBN6 386 aa17.01■□□□□ 0.31
TNFRSF1A-213ENST00000540022 TMEFF2Q9UIK5 374 aaPredicted RBP17.01■□□□□ 0.31
TNFRSF1A-213ENST00000540022 TMEM5Q9Y2B1 443 aa17.01■□□□□ 0.31
TNFRSF1A-213ENST00000540022 AP4B1Q9Y6B7 739 aa17.01■□□□□ 0.31
TNFRSF1A-213ENST00000540022 UBR5O95071 2799 aaPredicted RBP17.01■□□□□ 0.31
TNFRSF1A-213ENST00000540022 A0A0J9YW62 118 aa17.01■□□□□ 0.31
TNFRSF1A-213ENST00000540022 ADAP00813 363 aa17.01■□□□□ 0.31
TNFRSF1A-213ENST00000540022 BGLAPP02818 100 aa17.01■□□□□ 0.31
TNFRSF1A-213ENST00000540022 ALPLP05186 524 aa17.01■□□□□ 0.31
TNFRSF1A-213ENST00000540022 IMPDH2P12268 514 aa17.01■□□□□ 0.31
TNFRSF1A-213ENST00000540022 GCKP35557 465 aa17.01■□□□□ 0.31
TNFRSF1A-213ENST00000540022 GSSP48637 474 aa17.01■□□□□ 0.31
TNFRSF1A-213ENST00000540022 CLK1P49759 484 aaKnown RBP17.01■□□□□ 0.31
TNFRSF1A-213ENST00000540022 MYBPHQ13203 477 aa17.01■□□□□ 0.31
TNFRSF1A-213ENST00000540022 ZNF74Q16587 644 aa17.01■□□□□ 0.31
TNFRSF1A-213ENST00000540022 NHSL2Q5HYW2 709 aa17.01■□□□□ 0.31
TNFRSF1A-213ENST00000540022 FAM69AQ5T7M9 428 aa17.01■□□□□ 0.31
TNFRSF1A-213ENST00000540022 ZNF324BQ6AW86 544 aaPredicted RBP17.01■□□□□ 0.31
TNFRSF1A-213ENST00000540022 KDM4DQ6B0I6 523 aa17.01■□□□□ 0.31
TNFRSF1A-213ENST00000540022 VASNQ6EMK4 673 aa17.01■□□□□ 0.31
TNFRSF1A-213ENST00000540022 CDK20Q8IZL9 346 aa17.01■□□□□ 0.31
TNFRSF1A-213ENST00000540022 GALNT4Q8N4A0 578 aa17.01■□□□□ 0.31
TNFRSF1A-213ENST00000540022 LRRC17Q8N6Y2 441 aa17.01■□□□□ 0.31
TNFRSF1A-213ENST00000540022 GNPDA2Q8TDQ7 276 aa17.01■□□□□ 0.31
TNFRSF1A-213ENST00000540022 RASSF4Q9H2L5 321 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms