RNA–Protein interactions for RNA: ENST00000539827.5

HOMER3-204, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-204ENST00000539827 ERVK-25P63136 954 aa20.41■□□□□ 0.86
HOMER3-204ENST00000539827 C1DQ13901 141 aaKnown RBP20.41■□□□□ 0.86
HOMER3-204ENST00000539827 DPY19L2P2Q6ZN68 376 aa20.41■□□□□ 0.86
HOMER3-204ENST00000539827 TIPARPQ7Z3E1 657 aaKnown RBP20.41■□□□□ 0.86
HOMER3-204ENST00000539827 MISPQ8IVT2 679 aa20.41■□□□□ 0.86
HOMER3-204ENST00000539827 SIRT6Q8N6T7 355 aa20.41■□□□□ 0.86
HOMER3-204ENST00000539827 SDR9C7Q8NEX9 313 aa20.41■□□□□ 0.86
HOMER3-204ENST00000539827 SLC22A8Q8TCC7 542 aa20.41■□□□□ 0.86
HOMER3-204ENST00000539827 TAAR9Q96RI9 348 aa20.41■□□□□ 0.86
HOMER3-204ENST00000539827 CHCHD6Q9BRQ6 235 aa20.41■□□□□ 0.86
HOMER3-204ENST00000539827 KLHL1Q9NR64 748 aa20.41■□□□□ 0.86
HOMER3-204ENST00000539827 TNFRSF10DQ9UBN6 386 aa20.41■□□□□ 0.86
HOMER3-204ENST00000539827 FBXL4Q9UKA2 621 aa20.41■□□□□ 0.86
HOMER3-204ENST00000539827 TMED7-TICAM2A0A0A6YYA0 188 aa20.4■□□□□ 0.86
HOMER3-204ENST00000539827 IGF2P01344 180 aa20.4■□□□□ 0.86
HOMER3-204ENST00000539827 RPS18P62269 152 aaKnown RBP20.4■□□□□ 0.86
HOMER3-204ENST00000539827 RPS4XP62701 263 aaKnown RBP20.4■□□□□ 0.86
HOMER3-204ENST00000539827 C1QL3Q5VWW1 255 aa20.4■□□□□ 0.86
HOMER3-204ENST00000539827 C6orf15Q6UXA7 325 aaPredicted RBP20.4■□□□□ 0.86
HOMER3-204ENST00000539827 ATCAYQ86WG3 371 aa20.4■□□□□ 0.86
HOMER3-204ENST00000539827 SUMF1Q8NBK3 374 aa20.4■□□□□ 0.86
HOMER3-204ENST00000539827 GATAD2BQ8WXI9 593 aa20.4■□□□□ 0.86
HOMER3-204ENST00000539827 RELTQ969Z4 430 aa20.4■□□□□ 0.86
HOMER3-204ENST00000539827 IMMP1LQ96LU5 166 aa20.4■□□□□ 0.86
HOMER3-204ENST00000539827 RASL10BQ96S79 203 aa20.4■□□□□ 0.86
HOMER3-204ENST00000539827 KLRF1Q9NZS2 232 aa20.4■□□□□ 0.86
HOMER3-204ENST00000539827 MED11Q9P086 117 aa20.4■□□□□ 0.86
HOMER3-204ENST00000539827 PADI1Q9ULC6 663 aa20.4■□□□□ 0.86
HOMER3-204ENST00000539827 TMED7Q9Y3B3 224 aa20.4■□□□□ 0.86
HOMER3-204ENST00000539827 TMEM72A0PK05 275 aa20.39■□□□□ 0.86
HOMER3-204ENST00000539827 HTR3EA5X5Y0 456 aa20.39■□□□□ 0.86
HOMER3-204ENST00000539827 B4DXG7 233 aa20.39■□□□□ 0.86
HOMER3-204ENST00000539827 GYPBP06028 91 aa20.39■□□□□ 0.86
HOMER3-204ENST00000539827 CDK4P11802 303 aa20.39■□□□□ 0.86
HOMER3-204ENST00000539827 POLR2HP52434 150 aaKnown RBP20.39■□□□□ 0.86
HOMER3-204ENST00000539827 WNT4P56705 351 aa20.39■□□□□ 0.86
HOMER3-204ENST00000539827 RPS3AP61247 264 aaKnown RBP20.39■□□□□ 0.86
HOMER3-204ENST00000539827 KHDRBS1Q07666 443 aaKnown RBP eCLIP20.39■□□□□ 0.86
HOMER3-204ENST00000539827 C17orf67Q0P5P2 114 aa20.39■□□□□ 0.86
HOMER3-204ENST00000539827 CDCP2Q5VXM1 449 aa20.39■□□□□ 0.86
HOMER3-204ENST00000539827 OR10G3Q8NGC4 313 aa20.39■□□□□ 0.86
HOMER3-204ENST00000539827 LIPHQ8WWY8 451 aa20.39■□□□□ 0.86
HOMER3-204ENST00000539827 TTC9Q92623 222 aa20.39■□□□□ 0.86
HOMER3-204ENST00000539827 KISS1RQ969F8 398 aaPredicted RBP20.39■□□□□ 0.86
HOMER3-204ENST00000539827 ZHX1-C8orf76Q96EF9 292 aa20.39■□□□□ 0.86
HOMER3-204ENST00000539827 SECISBP2Q96T21 854 aaKnown RBP20.39■□□□□ 0.86
HOMER3-204ENST00000539827 HRH3Q9Y5N1 445 aa20.39■□□□□ 0.86
HOMER3-204ENST00000539827 MASP2O00187 686 aa20.39■□□□□ 0.85
HOMER3-204ENST00000539827 SUSD5O60279 629 aa20.39■□□□□ 0.85
HOMER3-204ENST00000539827 PAICSP22234 425 aaKnown RBP20.39■□□□□ 0.85
HOMER3-204ENST00000539827 PRPS1P60891 318 aa20.39■□□□□ 0.85
HOMER3-204ENST00000539827 MLLT11Q13015 90 aaPredicted RBP20.39■□□□□ 0.85
HOMER3-204ENST00000539827 C11orf91Q3C1V1 193 aa20.39■□□□□ 0.85
HOMER3-204ENST00000539827 C19orf48Q6RUI8 117 aa20.39■□□□□ 0.85
HOMER3-204ENST00000539827 ADGRG3Q86Y34 549 aa20.39■□□□□ 0.85
HOMER3-204ENST00000539827 GHDCQ8N2G8 530 aa20.39■□□□□ 0.85
HOMER3-204ENST00000539827 OR9Q1Q8NGQ5 310 aa20.39■□□□□ 0.85
HOMER3-204ENST00000539827 DYNC2LI1Q8TCX1 351 aa20.39■□□□□ 0.85
HOMER3-204ENST00000539827 TEAD3Q99594 435 aa20.39■□□□□ 0.85
HOMER3-204ENST00000539827 KATNB1Q9BVA0 655 aa20.39■□□□□ 0.85
HOMER3-204ENST00000539827 RACGAP1Q9H0H5 632 aa20.39■□□□□ 0.85
HOMER3-204ENST00000539827 KLHL21Q9UJP4 597 aa20.39■□□□□ 0.85
HOMER3-204ENST00000539827 TMEM129A0AVI4 362 aa20.38■□□□□ 0.85
HOMER3-204ENST00000539827 SLC25A12O75746 678 aa20.38■□□□□ 0.85
HOMER3-204ENST00000539827 MT-CO3P00414 261 aa20.38■□□□□ 0.85
HOMER3-204ENST00000539827 FBXO45P0C2W1 286 aa20.38■□□□□ 0.85
HOMER3-204ENST00000539827 ASAH2BP0C7U1 165 aa20.38■□□□□ 0.85
HOMER3-204ENST00000539827 SLC2A5P22732 501 aa20.38■□□□□ 0.85
HOMER3-204ENST00000539827 TMED10P49755 219 aaKnown RBP20.38■□□□□ 0.85
HOMER3-204ENST00000539827 TMEM99Q8N816 258 aa20.38■□□□□ 0.85
HOMER3-204ENST00000539827 OR11G2Q8NGC1 345 aa20.38■□□□□ 0.85
HOMER3-204ENST00000539827 CT55Q8WUE5 264 aa20.38■□□□□ 0.85
HOMER3-204ENST00000539827 RASD2Q96D21 266 aa20.38■□□□□ 0.85
HOMER3-204ENST00000539827 CDC6Q99741 560 aa20.38■□□□□ 0.85
HOMER3-204ENST00000539827 NPAS1Q99742 590 aa20.38■□□□□ 0.85
HOMER3-204ENST00000539827 CENPOQ9BU64 300 aa20.38■□□□□ 0.85
HOMER3-204ENST00000539827 DCSTAMPQ9H295 470 aa20.38■□□□□ 0.85
HOMER3-204ENST00000539827 NRIP3Q9NQ35 241 aa20.38■□□□□ 0.85
HOMER3-204ENST00000539827 HIF3AQ9Y2N7 669 aa20.38■□□□□ 0.85
HOMER3-204ENST00000539827 A0A1W2PNU3 283 aaPredicted RBP20.37■□□□□ 0.85
HOMER3-204ENST00000539827 ANKUB1A6NFN9 424 aa20.37■□□□□ 0.85
HOMER3-204ENST00000539827 IGHA1P01876 353 aa20.37■□□□□ 0.85
HOMER3-204ENST00000539827 BGLAPP02818 100 aa20.37■□□□□ 0.85
HOMER3-204ENST00000539827 MRPL3P09001 348 aaKnown RBP20.37■□□□□ 0.85
HOMER3-204ENST00000539827 TCN2P20062 427 aa20.37■□□□□ 0.85
HOMER3-204ENST00000539827 EXT1Q16394 746 aa20.37■□□□□ 0.85
HOMER3-204ENST00000539827 DHRS13Q6UX07 377 aa20.37■□□□□ 0.85
HOMER3-204ENST00000539827 GRINAQ7Z429 371 aa20.37■□□□□ 0.85
HOMER3-204ENST00000539827 LRRC75AQ8NAA5 344 aa20.37■□□□□ 0.85
HOMER3-204ENST00000539827 PSD4Q8NDX1 1056 aa20.37■□□□□ 0.85
HOMER3-204ENST00000539827 RNF138Q8WVD3 245 aa20.37■□□□□ 0.85
HOMER3-204ENST00000539827 TBX5Q99593 518 aa20.37■□□□□ 0.85
HOMER3-204ENST00000539827 ZNF160Q9HCG1 818 aa20.37■□□□□ 0.85
HOMER3-204ENST00000539827 ERVK13-1Q9NX77 482 aa20.37■□□□□ 0.85
HOMER3-204ENST00000539827 SPIN1Q9Y657 262 aaPredicted RBP20.37■□□□□ 0.85
HOMER3-204ENST00000539827 TRAV36DV7A0A075B6V5 113 aa20.37■□□□□ 0.85
HOMER3-204ENST00000539827 IMPA2O14732 288 aa20.37■□□□□ 0.85
HOMER3-204ENST00000539827 PLD2O14939 933 aa20.37■□□□□ 0.85
HOMER3-204ENST00000539827 CLPXO76031 633 aa20.37■□□□□ 0.85
HOMER3-204ENST00000539827 DLGAP3O95886 979 aa20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms