RNA–Protein interactions for RNA: ENST00000539332.2

DDB1-213, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-213ENST00000539332 HLA-DMAP28067 261 aa8.1□□□□□ -1.11
DDB1-213ENST00000539332 IFNA8P32881 189 aa8.1□□□□□ -1.11
DDB1-213ENST00000539332 ACAA2P42765 397 aaKnown RBP8.1□□□□□ -1.11
DDB1-213ENST00000539332 OMPP47874 163 aa8.1□□□□□ -1.11
DDB1-213ENST00000539332 RGS6P49758 472 aa8.1□□□□□ -1.11
DDB1-213ENST00000539332 CRISP1P54107 249 aa8.1□□□□□ -1.11
DDB1-213ENST00000539332 GALK2Q01415 458 aa8.1□□□□□ -1.11
DDB1-213ENST00000539332 SCN1BQ07699 218 aa8.1□□□□□ -1.11
DDB1-213ENST00000539332 ASAH1Q13510 395 aa8.1□□□□□ -1.11
DDB1-213ENST00000539332 TBRG1Q3YBR2 411 aa8.1□□□□□ -1.11
DDB1-213ENST00000539332 KLHL26Q53HC5 615 aa8.1□□□□□ -1.11
DDB1-213ENST00000539332 ZNF613Q6PF04 617 aa8.1□□□□□ -1.11
DDB1-213ENST00000539332 C19orf48Q6RUI8 117 aa8.1□□□□□ -1.11
DDB1-213ENST00000539332 ZER1Q7Z7L7 766 aa8.1□□□□□ -1.11
DDB1-213ENST00000539332 ENTHD1Q8IYW4 607 aa8.1□□□□□ -1.11
DDB1-213ENST00000539332 NLGN4XQ8N0W4 816 aa8.1□□□□□ -1.11
DDB1-213ENST00000539332 FAM109AQ8N4B1 249 aa8.1□□□□□ -1.11
DDB1-213ENST00000539332 STX19Q8N4C7 294 aa8.1□□□□□ -1.11
DDB1-213ENST00000539332 POGLUT1Q8NBL1 392 aa8.1□□□□□ -1.11
DDB1-213ENST00000539332 PLPP7Q8NBV4 271 aa8.1□□□□□ -1.11
DDB1-213ENST00000539332 NLGN4YQ8NFZ3 816 aaPredicted RBP8.1□□□□□ -1.11
DDB1-213ENST00000539332 OR2Y1Q8NGV0 311 aa8.1□□□□□ -1.11
DDB1-213ENST00000539332 ZFAND1Q8TCF1 268 aa8.1□□□□□ -1.11
DDB1-213ENST00000539332 CT55Q8WUE5 264 aa8.1□□□□□ -1.11
DDB1-213ENST00000539332 APH1BQ8WW43 257 aa8.1□□□□□ -1.11
DDB1-213ENST00000539332 CNOT9Q92600 299 aaKnown RBP8.1□□□□□ -1.11
DDB1-213ENST00000539332 GTPBP3Q969Y2 492 aaKnown RBP8.1□□□□□ -1.11
DDB1-213ENST00000539332 SLC41A3Q96GZ6 507 aa8.1□□□□□ -1.11
DDB1-213ENST00000539332 WDR77Q9BQA1 342 aaPredicted RBP8.1□□□□□ -1.11
DDB1-213ENST00000539332 PRSS27Q9BQR3 290 aa8.1□□□□□ -1.11
DDB1-213ENST00000539332 ZNF559Q9BR84 538 aa8.1□□□□□ -1.11
DDB1-213ENST00000539332 PRR14Q9BWN1 585 aa8.1□□□□□ -1.11
DDB1-213ENST00000539332 WWTR1Q9GZV5 400 aa8.1□□□□□ -1.11
DDB1-213ENST00000539332 ACOXLQ9NUZ1 547 aa8.1□□□□□ -1.11
DDB1-213ENST00000539332 PAQR5Q9NXK6 330 aaPredicted RBP8.1□□□□□ -1.11
DDB1-213ENST00000539332 CNOT2Q9NZN8 540 aaKnown RBP8.1□□□□□ -1.11
DDB1-213ENST00000539332 NTNG1Q9Y2I2 539 aa8.1□□□□□ -1.11
DDB1-213ENST00000539332 PTRH2Q9Y3E5 179 aaKnown RBP8.1□□□□□ -1.11
DDB1-213ENST00000539332 OR10H1Q9Y4A9 318 aa8.1□□□□□ -1.11
DDB1-213ENST00000539332 MEIOCA2RUB1 952 aa8.1□□□□□ -1.11
DDB1-213ENST00000539332 SH3D21A4FU49 640 aa8.1□□□□□ -1.11
DDB1-213ENST00000539332 CCDC182A6NF36 153 aa8.1□□□□□ -1.11
DDB1-213ENST00000539332 STMND1H3BQB6 276 aa8.1□□□□□ -1.11
DDB1-213ENST00000539332 J3KRW8 73 aa8.1□□□□□ -1.11
DDB1-213ENST00000539332 CCRL2O00421 344 aa8.1□□□□□ -1.11
DDB1-213ENST00000539332 TSPAN2O60636 221 aa8.1□□□□□ -1.11
DDB1-213ENST00000539332 ADAM11O75078 769 aa8.1□□□□□ -1.11
DDB1-213ENST00000539332 UMODP07911 640 aa8.1□□□□□ -1.11
DDB1-213ENST00000539332 CD63P08962 238 aa8.1□□□□□ -1.11
DDB1-213ENST00000539332 RBMS1P29558 406 aaKnown RBP8.1□□□□□ -1.11
DDB1-213ENST00000539332 STAT5AP42229 794 aa8.1□□□□□ -1.11
DDB1-213ENST00000539332 AP2S1P53680 142 aaPredicted RBP8.1□□□□□ -1.11
DDB1-213ENST00000539332 RAB25P57735 213 aa8.1□□□□□ -1.11
DDB1-213ENST00000539332 HOXC5Q00444 222 aa8.1□□□□□ -1.11
DDB1-213ENST00000539332 IL1RL1Q01638 556 aa8.1□□□□□ -1.11
DDB1-213ENST00000539332 IRF3Q14653 427 aa8.1□□□□□ -1.11
DDB1-213ENST00000539332 OR1Q1Q15612 314 aa8.1□□□□□ -1.11
DDB1-213ENST00000539332 NNATQ16517 81 aa8.1□□□□□ -1.11
DDB1-213ENST00000539332 C12orf73Q69YU5 71 aa8.1□□□□□ -1.11
DDB1-213ENST00000539332 IGF2-ASQ6U949 168 aa8.1□□□□□ -1.11
DDB1-213ENST00000539332 Q6ZPB1 254 aaPredicted RBP8.1□□□□□ -1.11
DDB1-213ENST00000539332 IDO2Q6ZQW0 420 aa8.1□□□□□ -1.11
DDB1-213ENST00000539332 HDDC2Q7Z4H3 204 aa8.1□□□□□ -1.11
DDB1-213ENST00000539332 NKAIN4Q8IVV8 208 aa8.1□□□□□ -1.11
DDB1-213ENST00000539332 LSMEM1Q8N8F7 131 aa8.1□□□□□ -1.11
DDB1-213ENST00000539332 APCDD1LQ8NCL9 501 aa8.1□□□□□ -1.11
DDB1-213ENST00000539332 ANKK1Q8NFD2 765 aa8.1□□□□□ -1.11
DDB1-213ENST00000539332 SLC7A6Q92536 515 aa8.1□□□□□ -1.11
DDB1-213ENST00000539332 KIAA1143Q96AT1 154 aaPredicted RBP8.1□□□□□ -1.11
DDB1-213ENST00000539332 RNF170Q96K19 258 aa8.1□□□□□ -1.11
DDB1-213ENST00000539332 LMF1Q96S06 567 aa8.1□□□□□ -1.11
DDB1-213ENST00000539332 GPA33Q99795 319 aa8.1□□□□□ -1.11
DDB1-213ENST00000539332 ZNF426Q9BUY5 554 aa8.1□□□□□ -1.11
DDB1-213ENST00000539332 CDCA4Q9BXL8 241 aa8.1□□□□□ -1.11
DDB1-213ENST00000539332 C12orf10Q9HB07 376 aa8.1□□□□□ -1.11
DDB1-213ENST00000539332 SMURF1Q9HCE7 757 aa8.1□□□□□ -1.11
DDB1-213ENST00000539332 ASCL3Q9NQ33 180 aa8.1□□□□□ -1.11
DDB1-213ENST00000539332 EXOSC3Q9NQT5 275 aaKnown RBP8.1□□□□□ -1.11
DDB1-213ENST00000539332 CTPS2Q9NRF8 586 aa8.1□□□□□ -1.11
DDB1-213ENST00000539332 COPS7AQ9UBW8 275 aa8.1□□□□□ -1.11
DDB1-213ENST00000539332 ZNF223Q9UK11 482 aaPredicted RBP8.1□□□□□ -1.11
DDB1-213ENST00000539332 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP8.1□□□□□ -1.11
DDB1-213ENST00000539332 SLC35A3Q9Y2D2 325 aa8.1□□□□□ -1.11
DDB1-213ENST00000539332 MED13Q9UHV7 2174 aa8.09□□□□□ -1.11
DDB1-213ENST00000539332 CACNA1AO00555 2505 aa8.09□□□□□ -1.11
DDB1-213ENST00000539332 EML6Q6ZMW3 1958 aa8.09□□□□□ -1.11
DDB1-213ENST00000539332 CFAP47Q6ZTR5 3102 aa8.09□□□□□ -1.11
DDB1-213ENST00000539332 NCOR2Q9Y618 2525 aa8.09□□□□□ -1.11
DDB1-213ENST00000539332 LOC102723996A0A087X1L8 192 aa8.09□□□□□ -1.11
DDB1-213ENST00000539332 A0A0B4J2E0 115 aa8.09□□□□□ -1.11
DDB1-213ENST00000539332 IGHV3-20A0A0C4DH32 117 aa8.09□□□□□ -1.11
DDB1-213ENST00000539332 LOC100506127A0A0U1RQW1 187 aa8.09□□□□□ -1.11
DDB1-213ENST00000539332 C2orf92A0A1B0GVN3 265 aa8.09□□□□□ -1.11
DDB1-213ENST00000539332 A0A1B0GX12 115 aa8.09□□□□□ -1.11
DDB1-213ENST00000539332 A0A1W2PQ72 361 aa8.09□□□□□ -1.11
DDB1-213ENST00000539332 SERINC4A6NH21 518 aa8.09□□□□□ -1.11
DDB1-213ENST00000539332 RAD1O60671 282 aa8.09□□□□□ -1.11
DDB1-213ENST00000539332 TMCC2O75069 709 aa8.09□□□□□ -1.11
DDB1-213ENST00000539332 RAB40ALP0C0E4 278 aa8.09□□□□□ -1.11
DDB1-213ENST00000539332 GKN3PP0CG01 181 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms