RNA–Protein interactions for RNA: ENST00000538456.3

SMARCA4-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 3

Gene SMARCA4, Length 738 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-206ENST00000538456 EXD2Q9NVH0 621 aa12.18□□□□□ -0.46
SMARCA4-206ENST00000538456 TRAPPC4Q9Y296 219 aa12.18□□□□□ -0.46
SMARCA4-206ENST00000538456 TMED7Q9Y3B3 224 aa12.18□□□□□ -0.46
SMARCA4-206ENST00000538456 WDR45Q9Y484 360 aa12.18□□□□□ -0.46
SMARCA4-206ENST00000538456 MGAM2Q2M2H8 2515 aa12.18□□□□□ -0.46
SMARCA4-206ENST00000538456 TMEM72A0PK05 275 aa12.17□□□□□ -0.46
SMARCA4-206ENST00000538456 ZC3H12DA2A288 527 aaKnown RBP12.17□□□□□ -0.46
SMARCA4-206ENST00000538456 AP3D1O14617 1153 aa12.17□□□□□ -0.46
SMARCA4-206ENST00000538456 EIF1BO60739 113 aaKnown RBP12.17□□□□□ -0.46
SMARCA4-206ENST00000538456 TRIM13O60858 407 aa12.17□□□□□ -0.46
SMARCA4-206ENST00000538456 KRT33AO76009 404 aa12.17□□□□□ -0.46
SMARCA4-206ENST00000538456 SNUPNO95149 360 aaKnown RBP12.17□□□□□ -0.46
SMARCA4-206ENST00000538456 LGI1O95970 557 aa12.17□□□□□ -0.46
SMARCA4-206ENST00000538456 OR12D1P0DN82 309 aa12.17□□□□□ -0.46
SMARCA4-206ENST00000538456 DAOP14920 347 aa12.17□□□□□ -0.46
SMARCA4-206ENST00000538456 KRT4P19013 534 aa12.17□□□□□ -0.46
SMARCA4-206ENST00000538456 PRPS1L1P21108 318 aa12.17□□□□□ -0.46
SMARCA4-206ENST00000538456 FKBP2P26885 142 aaKnown RBP12.17□□□□□ -0.46
SMARCA4-206ENST00000538456 SLC1A3P43003 542 aa12.17□□□□□ -0.46
SMARCA4-206ENST00000538456 PPOXP50336 477 aa12.17□□□□□ -0.46
SMARCA4-206ENST00000538456 IDH3GP51553 393 aaPredicted RBP12.17□□□□□ -0.46
SMARCA4-206ENST00000538456 PLAURQ03405 335 aa12.17□□□□□ -0.46
SMARCA4-206ENST00000538456 LGALS3BPQ08380 585 aa12.17□□□□□ -0.46
SMARCA4-206ENST00000538456 ZSWIM7Q19AV6 140 aa12.17□□□□□ -0.46
SMARCA4-206ENST00000538456 TBRG1Q3YBR2 411 aa12.17□□□□□ -0.46
SMARCA4-206ENST00000538456 C6orf136Q5SQH8 315 aa12.17□□□□□ -0.46
SMARCA4-206ENST00000538456 OTUD3Q5T2D3 398 aaPredicted RBP12.17□□□□□ -0.46
SMARCA4-206ENST00000538456 ATAD3BQ5T9A4 648 aa12.17□□□□□ -0.46
SMARCA4-206ENST00000538456 AAED1Q7RTV5 226 aa12.17□□□□□ -0.46
SMARCA4-206ENST00000538456 GPAT4Q86UL3 456 aa12.17□□□□□ -0.46
SMARCA4-206ENST00000538456 RIMKLAQ8IXN7 391 aa12.17□□□□□ -0.46
SMARCA4-206ENST00000538456 ZCCHC24Q8N2G6 241 aaKnown RBP12.17□□□□□ -0.46
SMARCA4-206ENST00000538456 OR9K2Q8NGE7 335 aa12.17□□□□□ -0.46
SMARCA4-206ENST00000538456 XAGE5Q8WWM1 108 aa12.17□□□□□ -0.46
SMARCA4-206ENST00000538456 ZG16BQ96DA0 208 aa12.17□□□□□ -0.46
SMARCA4-206ENST00000538456 AURKBQ96GD4 344 aaPredicted RBP12.17□□□□□ -0.46
SMARCA4-206ENST00000538456 ZNF385AQ96PM9 386 aaKnown RBP12.17□□□□□ -0.46
SMARCA4-206ENST00000538456 KATNB1Q9BVA0 655 aa12.17□□□□□ -0.46
SMARCA4-206ENST00000538456 PLK3Q9H4B4 646 aa12.17□□□□□ -0.46
SMARCA4-206ENST00000538456 SEC61A2Q9H9S3 476 aa12.17□□□□□ -0.46
SMARCA4-206ENST00000538456 PCDHGB4Q9UN71 923 aa12.17□□□□□ -0.46
SMARCA4-206ENST00000538456 hCG_2039718K7EN88 272 aa12.16□□□□□ -0.46
SMARCA4-206ENST00000538456 NR5A2O00482 541 aa12.16□□□□□ -0.46
SMARCA4-206ENST00000538456 LILRA1O75019 489 aa12.16□□□□□ -0.46
SMARCA4-206ENST00000538456 RGS9O75916 674 aaPredicted RBP12.16□□□□□ -0.46
SMARCA4-206ENST00000538456 PDE5AO76074 875 aa12.16□□□□□ -0.46
SMARCA4-206ENST00000538456 AKR7A3O95154 331 aa12.16□□□□□ -0.46
SMARCA4-206ENST00000538456 VENTXO95231 258 aa12.16□□□□□ -0.46
SMARCA4-206ENST00000538456 SHBGP04278 402 aa12.16□□□□□ -0.46
SMARCA4-206ENST00000538456 ERCC1P07992 297 aaPredicted RBP12.16□□□□□ -0.46
SMARCA4-206ENST00000538456 FGF4P08620 206 aa12.16□□□□□ -0.46
SMARCA4-206ENST00000538456 TACSTD2P09758 323 aa12.16□□□□□ -0.46
SMARCA4-206ENST00000538456 CECR9P0C854 216 aa12.16□□□□□ -0.46
SMARCA4-206ENST00000538456 G6PDP11413 515 aa12.16□□□□□ -0.46
SMARCA4-206ENST00000538456 GIFP27352 417 aa12.16□□□□□ -0.46
SMARCA4-206ENST00000538456 TACR3P29371 465 aa12.16□□□□□ -0.46
SMARCA4-206ENST00000538456 HTR3AP46098 478 aa12.16□□□□□ -0.46
SMARCA4-206ENST00000538456 POLR2HP52434 150 aaKnown RBP12.16□□□□□ -0.46
SMARCA4-206ENST00000538456 UBE2NP61088 152 aaKnown RBP12.16□□□□□ -0.46
SMARCA4-206ENST00000538456 ACTG1P63261 375 aa12.16□□□□□ -0.46
SMARCA4-206ENST00000538456 NAAAQ02083 359 aa12.16□□□□□ -0.46
SMARCA4-206ENST00000538456 FUT5Q11128 374 aa12.16□□□□□ -0.46
SMARCA4-206ENST00000538456 TRIP10Q15642 601 aa12.16□□□□□ -0.46
SMARCA4-206ENST00000538456 EFNB3Q15768 340 aa12.16□□□□□ -0.46
SMARCA4-206ENST00000538456 FAM174BQ3ZCQ3 159 aa12.16□□□□□ -0.46
SMARCA4-206ENST00000538456 C1QTNF12Q5T7M4 302 aa12.16□□□□□ -0.46
SMARCA4-206ENST00000538456 OR4F3Q6IEY1 312 aa12.16□□□□□ -0.46
SMARCA4-206ENST00000538456 PAQR6Q6TCH4 344 aa12.16□□□□□ -0.46
SMARCA4-206ENST00000538456 FRRS1Q6ZNA5 592 aa12.16□□□□□ -0.46
SMARCA4-206ENST00000538456 SVOPLQ8N434 492 aa12.16□□□□□ -0.46
SMARCA4-206ENST00000538456 TMEM99Q8N816 258 aa12.16□□□□□ -0.46
SMARCA4-206ENST00000538456 ZIC4Q8N9L1 334 aa12.16□□□□□ -0.46
SMARCA4-206ENST00000538456 POMGNT2Q8NAT1 580 aa12.16□□□□□ -0.46
SMARCA4-206ENST00000538456 OR4A15Q8NGL6 344 aa12.16□□□□□ -0.46
SMARCA4-206ENST00000538456 OR1K1Q8NGR3 316 aa12.16□□□□□ -0.46
SMARCA4-206ENST00000538456 CNOT9Q92600 299 aaKnown RBP12.16□□□□□ -0.46
SMARCA4-206ENST00000538456 TMEM45BQ96B21 275 aa12.16□□□□□ -0.46
SMARCA4-206ENST00000538456 ROPN1LQ96C74 230 aa12.16□□□□□ -0.46
SMARCA4-206ENST00000538456 ALKBH3Q96Q83 286 aaPredicted RBP12.16□□□□□ -0.46
SMARCA4-206ENST00000538456 MECRQ9BV79 373 aa12.16□□□□□ -0.46
SMARCA4-206ENST00000538456 TXLNGYQ9BZA5 131 aa12.16□□□□□ -0.46
SMARCA4-206ENST00000538456 METTL17Q9H7H0 456 aaPredicted RBP12.16□□□□□ -0.46
SMARCA4-206ENST00000538456 EXOSC3Q9NQT5 275 aaKnown RBP12.16□□□□□ -0.46
SMARCA4-206ENST00000538456 TMEM45AQ9NWC5 275 aa12.16□□□□□ -0.46
SMARCA4-206ENST00000538456 METRNQ9UJH8 293 aa12.16□□□□□ -0.46
SMARCA4-206ENST00000538456 MID2Q9UJV3 735 aa12.16□□□□□ -0.46
SMARCA4-206ENST00000538456 OSGIN1Q9UJX0 560 aa12.16□□□□□ -0.46
SMARCA4-206ENST00000538456 A0A096LPE4 126 aa12.15□□□□□ -0.46
SMARCA4-206ENST00000538456 A0A1W2PPZ6 126 aa12.15□□□□□ -0.46
SMARCA4-206ENST00000538456 SH3PXD2BA1X283 911 aa12.15□□□□□ -0.46
SMARCA4-206ENST00000538456 CALCRP30988 508 aa12.15□□□□□ -0.46
SMARCA4-206ENST00000538456 CDH15P55291 814 aa12.15□□□□□ -0.46
SMARCA4-206ENST00000538456 KCNJ10P78508 379 aa12.15□□□□□ -0.46
SMARCA4-206ENST00000538456 HPCAP84074 193 aa12.15□□□□□ -0.46
SMARCA4-206ENST00000538456 CEACAM7Q14002 265 aa12.15□□□□□ -0.46
SMARCA4-206ENST00000538456 OR7A5Q15622 319 aa12.15□□□□□ -0.46
SMARCA4-206ENST00000538456 GPAT3Q53EU6 434 aa12.15□□□□□ -0.46
SMARCA4-206ENST00000538456 ANKRD16Q6P6B7 361 aa12.15□□□□□ -0.46
SMARCA4-206ENST00000538456 ZCCHC23Q6ZST2 131 aa12.15□□□□□ -0.46
SMARCA4-206ENST00000538456 ABHD12BQ7Z5M8 362 aaPredicted RBP12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms