RNA–Protein interactions for RNA: ENST00000538280.1

DDB1-211, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 227 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-211ENST00000538280 F8A1P23610 371 aa8.47□□□□□ -1.05
DDB1-211ENST00000538280 THBS2P35442 1172 aa8.47□□□□□ -1.05
DDB1-211ENST00000538280 ATP6V1E1P36543 226 aa8.47□□□□□ -1.05
DDB1-211ENST00000538280 DDOSTP39656 456 aa8.47□□□□□ -1.05
DDB1-211ENST00000538280 TMED10P49755 219 aaKnown RBP8.47□□□□□ -1.05
DDB1-211ENST00000538280 EPHA4P54764 986 aa8.47□□□□□ -1.05
DDB1-211ENST00000538280 RPS4XP62701 263 aaKnown RBP8.47□□□□□ -1.05
DDB1-211ENST00000538280 BTG2P78543 158 aa8.47□□□□□ -1.05
DDB1-211ENST00000538280 MAT1AQ00266 395 aaKnown RBP8.47□□□□□ -1.05
DDB1-211ENST00000538280 STX4Q12846 297 aa8.47□□□□□ -1.05
DDB1-211ENST00000538280 ZNF267Q14586 743 aaPredicted RBP8.47□□□□□ -1.05
DDB1-211ENST00000538280 INSL4Q14641 139 aa8.47□□□□□ -1.05
DDB1-211ENST00000538280 KCNJ8Q15842 424 aa8.47□□□□□ -1.05
DDB1-211ENST00000538280 KLHL26Q53HC5 615 aa8.47□□□□□ -1.05
DDB1-211ENST00000538280 TCTE1Q5JU00 501 aa8.47□□□□□ -1.05
DDB1-211ENST00000538280 SLC35D3Q5M8T2 416 aa8.47□□□□□ -1.05
DDB1-211ENST00000538280 PMS2CLQ68D20 193 aa8.47□□□□□ -1.05
DDB1-211ENST00000538280 HBMQ6B0K9 141 aa8.47□□□□□ -1.05
DDB1-211ENST00000538280 FAAH2Q6GMR7 532 aa8.47□□□□□ -1.05
DDB1-211ENST00000538280 ZNF517Q6ZMY9 492 aaPredicted RBP8.47□□□□□ -1.05
DDB1-211ENST00000538280 NCCRP1Q6ZVX7 275 aaPredicted RBP8.47□□□□□ -1.05
DDB1-211ENST00000538280 TPRA1Q86W33 373 aa8.47□□□□□ -1.05
DDB1-211ENST00000538280 NR2C2APQ86WQ0 139 aa8.47□□□□□ -1.05
DDB1-211ENST00000538280 RAB43Q86YS6 212 aa8.47□□□□□ -1.05
DDB1-211ENST00000538280 SYS1Q8N2H4 156 aa8.47□□□□□ -1.05
DDB1-211ENST00000538280 SDR16C5Q8N3Y7 309 aa8.47□□□□□ -1.05
DDB1-211ENST00000538280 CAMKK1Q8N5S9 505 aa8.47□□□□□ -1.05
DDB1-211ENST00000538280 POMGNT2Q8NAT1 580 aa8.47□□□□□ -1.05
DDB1-211ENST00000538280 OR6F1Q8NGZ6 308 aa8.47□□□□□ -1.05
DDB1-211ENST00000538280 OR51A7Q8NH64 312 aa8.47□□□□□ -1.05
DDB1-211ENST00000538280 OR4C6Q8NH72 309 aa8.47□□□□□ -1.05
DDB1-211ENST00000538280 C16orf52Q8NHV5 167 aa8.47□□□□□ -1.05
DDB1-211ENST00000538280 RPS4Y2Q8TD47 263 aa8.47□□□□□ -1.05
DDB1-211ENST00000538280 LIPHQ8WWY8 451 aa8.47□□□□□ -1.05
DDB1-211ENST00000538280 ZCCHC14Q8WYQ9 949 aaKnown RBP8.47□□□□□ -1.05
DDB1-211ENST00000538280 SMPDL3BQ92485 455 aa8.47□□□□□ -1.05
DDB1-211ENST00000538280 C3orf49Q96BT1 292 aa8.47□□□□□ -1.05
DDB1-211ENST00000538280 RBM18Q96H35 190 aaKnown RBP8.47□□□□□ -1.05
DDB1-211ENST00000538280 DEPDC7Q96QD5 511 aa8.47□□□□□ -1.05
DDB1-211ENST00000538280 CTRCQ99895 268 aa8.47□□□□□ -1.05
DDB1-211ENST00000538280 NDC1Q9BTX1 674 aa8.47□□□□□ -1.05
DDB1-211ENST00000538280 NMNAT2Q9BZQ4 307 aa8.47□□□□□ -1.05
DDB1-211ENST00000538280 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.47□□□□□ -1.05
DDB1-211ENST00000538280 C11orf54Q9H0W9 315 aaPredicted RBP8.47□□□□□ -1.05
DDB1-211ENST00000538280 OR10A5Q9H207 317 aa8.47□□□□□ -1.05
DDB1-211ENST00000538280 MOV10Q9HCE1 1003 aaKnown RBP8.47□□□□□ -1.05
DDB1-211ENST00000538280 MKKSQ9NPJ1 570 aaPredicted RBP8.47□□□□□ -1.05
DDB1-211ENST00000538280 EXOSC3Q9NQT5 275 aaKnown RBP8.47□□□□□ -1.05
DDB1-211ENST00000538280 LANCL2Q9NS86 450 aa8.47□□□□□ -1.05
DDB1-211ENST00000538280 LRIT1Q9P2V4 623 aa8.47□□□□□ -1.05
DDB1-211ENST00000538280 PRODH2Q9UF12 536 aa8.47□□□□□ -1.05
DDB1-211ENST00000538280 KLK13Q9UKR3 277 aa8.47□□□□□ -1.05
DDB1-211ENST00000538280 ERVK-19Q9WJR5 959 aa8.47□□□□□ -1.05
DDB1-211ENST00000538280 MMACHCQ9Y4U1 282 aa8.47□□□□□ -1.05
DDB1-211ENST00000538280 TMEM184BQ9Y519 407 aaPredicted RBP8.47□□□□□ -1.05
DDB1-211ENST00000538280 FASNP49327 2511 aaKnown RBP8.46□□□□□ -1.05
DDB1-211ENST00000538280 IGKV1D-42A0A075B6H8 117 aa8.46□□□□□ -1.06
DDB1-211ENST00000538280 IGKV3D-11A0A0A0MRZ8 115 aa8.46□□□□□ -1.06
DDB1-211ENST00000538280 C2orf92A0A1B0GVN3 265 aa8.46□□□□□ -1.06
DDB1-211ENST00000538280 SPAARA0A1B0GVQ0 90 aa8.46□□□□□ -1.06
DDB1-211ENST00000538280 SMIM30A4D0T7 59 aa8.46□□□□□ -1.06
DDB1-211ENST00000538280 HMX3A6NHT5 357 aa8.46□□□□□ -1.06
DDB1-211ENST00000538280 B4DXG7 233 aa8.46□□□□□ -1.06
DDB1-211ENST00000538280 E9PI62 339 aa8.46□□□□□ -1.06
DDB1-211ENST00000538280 NCR1O76036 304 aa8.46□□□□□ -1.06
DDB1-211ENST00000538280 OR7A10O76100 309 aa8.46□□□□□ -1.06
DDB1-211ENST00000538280 IL33O95760 270 aa8.46□□□□□ -1.06
DDB1-211ENST00000538280 CLUP10909 449 aa8.46□□□□□ -1.06
DDB1-211ENST00000538280 APEX1P27695 318 aaKnown RBP8.46□□□□□ -1.06
DDB1-211ENST00000538280 CD38P28907 300 aa8.46□□□□□ -1.06
DDB1-211ENST00000538280 MLLT3P42568 568 aaPredicted RBP8.46□□□□□ -1.06
DDB1-211ENST00000538280 E2F1Q01094 437 aa8.46□□□□□ -1.06
DDB1-211ENST00000538280 CRYZQ08257 329 aaKnown RBP8.46□□□□□ -1.06
DDB1-211ENST00000538280 IL10RAQ13651 578 aa8.46□□□□□ -1.06
DDB1-211ENST00000538280 ERV3-1Q14264 604 aa8.46□□□□□ -1.06
DDB1-211ENST00000538280 BCL2A1Q16548 175 aa8.46□□□□□ -1.06
DDB1-211ENST00000538280 CDONQ4KMG0 1287 aa8.46□□□□□ -1.06
DDB1-211ENST00000538280 KLHL12Q53G59 568 aa8.46□□□□□ -1.06
DDB1-211ENST00000538280 PYDC2Q56P42 97 aa8.46□□□□□ -1.06
DDB1-211ENST00000538280 LCN1P1Q5VSP4 162 aa8.46□□□□□ -1.06
DDB1-211ENST00000538280 DPY19L2P2Q6ZN68 376 aa8.46□□□□□ -1.06
DDB1-211ENST00000538280 CARFQ8N187 725 aa8.46□□□□□ -1.06
DDB1-211ENST00000538280 LRRC75AQ8NAA5 344 aa8.46□□□□□ -1.06
DDB1-211ENST00000538280 DUSP18Q8NEJ0 188 aa8.46□□□□□ -1.06
DDB1-211ENST00000538280 TSTD1Q8NFU3 115 aa8.46□□□□□ -1.06
DDB1-211ENST00000538280 OR10H4Q8NGA5 316 aa8.46□□□□□ -1.06
DDB1-211ENST00000538280 RLN3Q8WXF3 142 aa8.46□□□□□ -1.06
DDB1-211ENST00000538280 NACC2Q96BF6 587 aa8.46□□□□□ -1.06
DDB1-211ENST00000538280 OTULINQ96BN8 352 aa8.46□□□□□ -1.06
DDB1-211ENST00000538280 ARSGQ96EG1 525 aa8.46□□□□□ -1.06
DDB1-211ENST00000538280 C4orf36Q96KX1 117 aa8.46□□□□□ -1.06
DDB1-211ENST00000538280 ERMAPQ96PL5 475 aaPredicted RBP8.46□□□□□ -1.06
DDB1-211ENST00000538280 TBX5Q99593 518 aa8.46□□□□□ -1.06
DDB1-211ENST00000538280 KCNJ15Q99712 375 aa8.46□□□□□ -1.06
DDB1-211ENST00000538280 TTYH2Q9BSA4 534 aa8.46□□□□□ -1.06
DDB1-211ENST00000538280 TMEM43Q9BTV4 400 aa8.46□□□□□ -1.06
DDB1-211ENST00000538280 OR51V1Q9H2C8 321 aa8.46□□□□□ -1.06
DDB1-211ENST00000538280 ZCCHC4Q9H5U6 513 aa8.46□□□□□ -1.06
DDB1-211ENST00000538280 RERGLQ9H628 205 aa8.46□□□□□ -1.06
DDB1-211ENST00000538280 C12orf10Q9HB07 376 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms