RNA–Protein interactions for RNA: ENST00000537529.6

MKS1-204, Transcript of Meckel syndrome, type 1, humanhuman

TSL 1 (best) BASIC

Gene MKS1, Length 2,083 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-204ENST00000537529 VN1R1Q9GZP7 353 aa14.31□□□□□ -0.12
MKS1-204ENST00000537529 ADAM30Q9UKF2 790 aa14.31□□□□□ -0.12
MKS1-204ENST00000537529 SRPK3Q9UPE1 567 aa14.31□□□□□ -0.12
MKS1-204ENST00000537529 PCDHGB7Q9Y5F8 929 aa14.31□□□□□ -0.12
MKS1-204ENST00000537529 PCDHGB2Q9Y5G2 931 aa14.31□□□□□ -0.12
MKS1-204ENST00000537529 CEP192Q8TEP8 1941 aa14.31□□□□□ -0.12
MKS1-204ENST00000537529 SPAG17Q6Q759 2223 aa14.31□□□□□ -0.12
MKS1-204ENST00000537529 E9PI62 339 aa14.3□□□□□ -0.12
MKS1-204ENST00000537529 SNPHO15079 494 aa14.3□□□□□ -0.12
MKS1-204ENST00000537529 TO15178 435 aa14.3□□□□□ -0.12
MKS1-204ENST00000537529 TMCC2O75069 709 aa14.3□□□□□ -0.12
MKS1-204ENST00000537529 NCR1O76036 304 aa14.3□□□□□ -0.12
MKS1-204ENST00000537529 DIO1P49895 249 aa14.3□□□□□ -0.12
MKS1-204ENST00000537529 EFNA3P52797 238 aa14.3□□□□□ -0.12
MKS1-204ENST00000537529 OR12D2P58182 307 aa14.3□□□□□ -0.12
MKS1-204ENST00000537529 ERVK-25P63136 954 aa14.3□□□□□ -0.12
MKS1-204ENST00000537529 SCN1BQ07699 218 aa14.3□□□□□ -0.12
MKS1-204ENST00000537529 PLCXD2Q0VAA5 305 aa14.3□□□□□ -0.12
MKS1-204ENST00000537529 SHBQ15464 509 aa14.3□□□□□ -0.12
MKS1-204ENST00000537529 GXYLT1Q4G148 440 aa14.3□□□□□ -0.12
MKS1-204ENST00000537529 SLC35F2Q8IXU6 374 aa14.3□□□□□ -0.12
MKS1-204ENST00000537529 NPEPL1Q8NDH3 523 aa14.3□□□□□ -0.12
MKS1-204ENST00000537529 ACOT12Q8WYK0 555 aa14.3□□□□□ -0.12
MKS1-204ENST00000537529 WWTR1Q9GZV5 400 aa14.3□□□□□ -0.12
MKS1-204ENST00000537529 RNF32Q9H0A6 362 aa14.3□□□□□ -0.12
MKS1-204ENST00000537529 SYNDIG1Q9H7V2 258 aa14.3□□□□□ -0.12
MKS1-204ENST00000537529 TIGARQ9NQ88 270 aa14.3□□□□□ -0.12
MKS1-204ENST00000537529 KLHL1Q9NR64 748 aa14.3□□□□□ -0.12
MKS1-204ENST00000537529 MKL2Q9ULH7 1088 aa14.3□□□□□ -0.12
MKS1-204ENST00000537529 HIF3AQ9Y2N7 669 aa14.3□□□□□ -0.12
MKS1-204ENST00000537529 KNL1Q8NG31 2342 aa14.3□□□□□ -0.12
MKS1-204ENST00000537529 TP53BP1Q12888 1972 aaPredicted RBP14.3□□□□□ -0.12
MKS1-204ENST00000537529 SHISA3A0PJX4 238 aa14.3□□□□□ -0.12
MKS1-204ENST00000537529 TOX3O15405 576 aaPredicted RBP14.3□□□□□ -0.12
MKS1-204ENST00000537529 MYL9P24844 172 aa14.3□□□□□ -0.12
MKS1-204ENST00000537529 NR0B1P51843 470 aaKnown RBP14.3□□□□□ -0.12
MKS1-204ENST00000537529 E2F1Q01094 437 aa14.3□□□□□ -0.12
MKS1-204ENST00000537529 SLC3A1Q07837 685 aa14.3□□□□□ -0.12
MKS1-204ENST00000537529 IL10RAQ13651 578 aa14.3□□□□□ -0.12
MKS1-204ENST00000537529 BAK1Q16611 211 aa14.3□□□□□ -0.12
MKS1-204ENST00000537529 PYDC2Q56P42 97 aa14.3□□□□□ -0.12
MKS1-204ENST00000537529 LYSMD4Q5XG99 296 aa14.3□□□□□ -0.12
MKS1-204ENST00000537529 SYS1Q8N2H4 156 aa14.3□□□□□ -0.12
MKS1-204ENST00000537529 OR1N1Q8NGS0 311 aa14.3□□□□□ -0.12
MKS1-204ENST00000537529 MOSPD2Q8NHP6 518 aa14.3□□□□□ -0.12
MKS1-204ENST00000537529 NMNAT3Q96T66 252 aa14.3□□□□□ -0.12
MKS1-204ENST00000537529 IER2Q9BTL4 223 aa14.3□□□□□ -0.12
MKS1-204ENST00000537529 NANSQ9NR45 359 aa14.3□□□□□ -0.12
MKS1-204ENST00000537529 A0A1W2PQ09 198 aa14.29□□□□□ -0.12
MKS1-204ENST00000537529 A0A1W2PQD3 144 aa14.29□□□□□ -0.12
MKS1-204ENST00000537529 SOX1O00570 391 aaPredicted RBP14.29□□□□□ -0.12
MKS1-204ENST00000537529 TSPAN2O60636 221 aa14.29□□□□□ -0.12
MKS1-204ENST00000537529 TFP02787 698 aa14.29□□□□□ -0.12
MKS1-204ENST00000537529 APEHP13798 732 aaKnown RBP14.29□□□□□ -0.12
MKS1-204ENST00000537529 SPI1P17947 270 aa14.29□□□□□ -0.12
MKS1-204ENST00000537529 PYCR1P32322 319 aa14.29□□□□□ -0.12
MKS1-204ENST00000537529 NRG3P56975 720 aa14.29□□□□□ -0.12
MKS1-204ENST00000537529 ZNF117Q03924 483 aa14.29□□□□□ -0.12
MKS1-204ENST00000537529 DMKNQ6E0U4 476 aaPredicted RBP14.29□□□□□ -0.12
MKS1-204ENST00000537529 METAP1DQ6UB28 335 aaPredicted RBP14.29□□□□□ -0.12
MKS1-204ENST00000537529 SSX6Q7RTT6 188 aa14.29□□□□□ -0.12
MKS1-204ENST00000537529 JAZF1Q86VZ6 243 aa14.29□□□□□ -0.12
MKS1-204ENST00000537529 OR5J2Q8NH18 312 aa14.29□□□□□ -0.12
MKS1-204ENST00000537529 SMAP2Q8WU79 429 aaPredicted RBP14.29□□□□□ -0.12
MKS1-204ENST00000537529 HPS1Q92902 700 aa14.29□□□□□ -0.12
MKS1-204ENST00000537529 RASD2Q96D21 266 aa14.29□□□□□ -0.12
MKS1-204ENST00000537529 TXNDC15Q96J42 360 aa14.29□□□□□ -0.12
MKS1-204ENST00000537529 NMNAT2Q9BZQ4 307 aa14.29□□□□□ -0.12
MKS1-204ENST00000537529 NRSN2Q9GZP1 204 aa14.29□□□□□ -0.12
MKS1-204ENST00000537529 MMP25Q9NPA2 562 aa14.29□□□□□ -0.12
MKS1-204ENST00000537529 GON4LQ3T8J9 2241 aa14.29□□□□□ -0.12
MKS1-204ENST00000537529 SPTBP11277 2137 aa14.29□□□□□ -0.12
MKS1-204ENST00000537529 COL5A1P20908 1838 aaPredicted RBP14.29□□□□□ -0.12
MKS1-204ENST00000537529 BLOC1S5-TXNDC5H3BN57 136 aa14.29□□□□□ -0.12
MKS1-204ENST00000537529 HCRTR2O43614 444 aa14.29□□□□□ -0.12
MKS1-204ENST00000537529 EIF4E2O60573 245 aaKnown RBP14.29□□□□□ -0.12
MKS1-204ENST00000537529 HPGDSO60760 199 aa14.29□□□□□ -0.12
MKS1-204ENST00000537529 SLC19A2O60779 497 aa14.29□□□□□ -0.12
MKS1-204ENST00000537529 CD14P08571 375 aa14.29□□□□□ -0.12
MKS1-204ENST00000537529 FOSL2P15408 326 aa14.29□□□□□ -0.12
MKS1-204ENST00000537529 PTBP1P26599 531 aaKnown RBP eCLIP14.29□□□□□ -0.12
MKS1-204ENST00000537529 MST1P26927 711 aa14.29□□□□□ -0.12
MKS1-204ENST00000537529 EPHA8P29322 1005 aaPredicted RBP14.29□□□□□ -0.12
MKS1-204ENST00000537529 TACR3P29371 465 aa14.29□□□□□ -0.12
MKS1-204ENST00000537529 AQP2P41181 271 aa14.29□□□□□ -0.12
MKS1-204ENST00000537529 NAA10P41227 235 aaPredicted RBP14.29□□□□□ -0.12
MKS1-204ENST00000537529 GBX2P52951 348 aaPredicted RBP14.29□□□□□ -0.12
MKS1-204ENST00000537529 TMEM71Q6P5X7 295 aa14.29□□□□□ -0.12
MKS1-204ENST00000537529 CNIH2Q6PI25 160 aa14.29□□□□□ -0.12
MKS1-204ENST00000537529 NUP54Q7Z3B4 507 aa14.29□□□□□ -0.12
MKS1-204ENST00000537529 UBALD2Q8IYN6 164 aa14.29□□□□□ -0.12
MKS1-204ENST00000537529 MS4A15Q8N5U1 240 aa14.29□□□□□ -0.12
MKS1-204ENST00000537529 PLPP5Q8NEB5 264 aa14.29□□□□□ -0.12
MKS1-204ENST00000537529 OR51L1Q8NGJ5 315 aa14.29□□□□□ -0.12
MKS1-204ENST00000537529 ABHD4Q8TB40 342 aa14.29□□□□□ -0.12
MKS1-204ENST00000537529 OMA1Q96E52 524 aa14.29□□□□□ -0.12
MKS1-204ENST00000537529 DDOQ99489 341 aa14.29□□□□□ -0.12
MKS1-204ENST00000537529 CDX2Q99626 313 aaPredicted RBP14.29□□□□□ -0.12
MKS1-204ENST00000537529 DUSP23Q9BVJ7 150 aa14.29□□□□□ -0.12
MKS1-204ENST00000537529 TBL1XR1Q9BZK7 514 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms