RNA–Protein interactions for RNA: ENST00000537178.5

CLIP1-209, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLIP1, Length 5,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-209ENST00000537178 ARAFP10398 606 aa9.94□□□□□ -0.82
CLIP1-209ENST00000537178 HBG1P69891 147 aa9.94□□□□□ -0.82
CLIP1-209ENST00000537178 HBG2P69892 147 aa9.94□□□□□ -0.82
CLIP1-209ENST00000537178 SRPXP78539 464 aa9.94□□□□□ -0.82
CLIP1-209ENST00000537178 DEFA6Q01524 100 aa9.94□□□□□ -0.82
CLIP1-209ENST00000537178 COX15Q7KZN9 410 aa9.94□□□□□ -0.82
CLIP1-209ENST00000537178 MMP21Q8N119 569 aa9.94□□□□□ -0.82
CLIP1-209ENST00000537178 OR6V1Q8N148 313 aa9.94□□□□□ -0.82
CLIP1-209ENST00000537178 PLPP5Q8NEB5 264 aa9.94□□□□□ -0.82
CLIP1-209ENST00000537178 NANPQ8TBE9 248 aa9.94□□□□□ -0.82
CLIP1-209ENST00000537178 ZFP90Q8TF47 636 aa9.94□□□□□ -0.82
CLIP1-209ENST00000537178 NEIL2Q969S2 332 aa9.94□□□□□ -0.82
CLIP1-209ENST00000537178 MUCL1Q96DR8 90 aa9.94□□□□□ -0.82
CLIP1-209ENST00000537178 SMCO4Q9NRQ5 59 aa9.94□□□□□ -0.82
CLIP1-209ENST00000537178 AGPAT4Q9NRZ5 378 aa9.94□□□□□ -0.82
CLIP1-209ENST00000537178 ZDHHC7Q9NXF8 308 aa9.94□□□□□ -0.82
CLIP1-209ENST00000537178 MYH9P35579 1960 aaKnown RBP9.94□□□□□ -0.82
CLIP1-209ENST00000537178 LILRB3O75022 631 aa9.94□□□□□ -0.82
CLIP1-209ENST00000537178 OR7C1O76099 320 aaPredicted RBP9.94□□□□□ -0.82
CLIP1-209ENST00000537178 CDK4P11802 303 aa9.94□□□□□ -0.82
CLIP1-209ENST00000537178 DRD1P21728 446 aa9.94□□□□□ -0.82
CLIP1-209ENST00000537178 TNFSF8P32971 234 aa9.94□□□□□ -0.82
CLIP1-209ENST00000537178 ACSM1Q08AH1 577 aa9.94□□□□□ -0.82
CLIP1-209ENST00000537178 TATDN3Q17R31 274 aa9.94□□□□□ -0.82
CLIP1-209ENST00000537178 MCATQ8IVS2 390 aaKnown RBP9.94□□□□□ -0.82
CLIP1-209ENST00000537178 TEX19Q8NA77 164 aa9.94□□□□□ -0.82
CLIP1-209ENST00000537178 PCYT2Q99447 389 aa9.94□□□□□ -0.82
CLIP1-209ENST00000537178 ELOVL3Q9HB03 270 aa9.94□□□□□ -0.82
CLIP1-209ENST00000537178 RCE1Q9Y256 329 aa9.94□□□□□ -0.82
CLIP1-209ENST00000537178 ZNF281Q9Y2X9 895 aa9.94□□□□□ -0.82
CLIP1-209ENST00000537178 METTL15A6NJ78 407 aa9.93□□□□□ -0.82
CLIP1-209ENST00000537178 F6UZH7 168 aa9.93□□□□□ -0.82
CLIP1-209ENST00000537178 CACNG3O60359 315 aa9.93□□□□□ -0.82
CLIP1-209ENST00000537178 IQCF3P0C7M6 154 aa9.93□□□□□ -0.82
CLIP1-209ENST00000537178 ACP2P11117 423 aa9.93□□□□□ -0.82
CLIP1-209ENST00000537178 AHRP35869 848 aa9.93□□□□□ -0.82
CLIP1-209ENST00000537178 BMPR1AP36894 532 aa9.93□□□□□ -0.82
CLIP1-209ENST00000537178 RBPJQ06330 500 aa9.93□□□□□ -0.82
CLIP1-209ENST00000537178 ARL16Q0P5N6 197 aa9.93□□□□□ -0.82
CLIP1-209ENST00000537178 HNF4GQ14541 408 aa9.93□□□□□ -0.82
CLIP1-209ENST00000537178 RBMS2Q15434 407 aaKnown RBP9.93□□□□□ -0.82
CLIP1-209ENST00000537178 OR7E24Q6IFN5 339 aa9.93□□□□□ -0.82
CLIP1-209ENST00000537178 FAM199XQ6PEV8 388 aaPredicted RBP9.93□□□□□ -0.82
CLIP1-209ENST00000537178 OR11L1Q8NGX0 322 aa9.93□□□□□ -0.82
CLIP1-209ENST00000537178 FAM3CQ92520 227 aa9.93□□□□□ -0.82
CLIP1-209ENST00000537178 CDS1Q92903 461 aa9.93□□□□□ -0.82
CLIP1-209ENST00000537178 ZNF597Q96LX8 424 aa9.93□□□□□ -0.82
CLIP1-209ENST00000537178 STEAP1Q9UHE8 339 aa9.93□□□□□ -0.82
CLIP1-209ENST00000537178 LCTP09848 1927 aa9.93□□□□□ -0.82
CLIP1-209ENST00000537178 RP1L1Q8IWN7 2480 aaPredicted RBP9.93□□□□□ -0.82
CLIP1-209ENST00000537178 TMEM82A0PJX8 343 aa9.93□□□□□ -0.82
CLIP1-209ENST00000537178 SGK494L7N484 410 aa9.93□□□□□ -0.82
CLIP1-209ENST00000537178 ITGB7P26010 798 aa9.93□□□□□ -0.82
CLIP1-209ENST00000537178 NPBWR1P48145 328 aa9.93□□□□□ -0.82
CLIP1-209ENST00000537178 MRPS34P82930 218 aaKnown RBP9.93□□□□□ -0.82
CLIP1-209ENST00000537178 TLE4Q04727 773 aa9.93□□□□□ -0.82
CLIP1-209ENST00000537178 PLA2G7Q13093 441 aa9.93□□□□□ -0.82
CLIP1-209ENST00000537178 AADACL3Q5VUY0 350 aa9.93□□□□□ -0.82
CLIP1-209ENST00000537178 HEPHL1Q6MZM0 1159 aa9.93□□□□□ -0.82
CLIP1-209ENST00000537178 SIMC1Q8NDZ2 872 aa9.93□□□□□ -0.82
CLIP1-209ENST00000537178 RHBDD1Q8TEB9 315 aa9.93□□□□□ -0.82
CLIP1-209ENST00000537178 OR1E3Q8WZA6 343 aa9.93□□□□□ -0.82
CLIP1-209ENST00000537178 MCRIP1C9JLW8 97 aa9.93□□□□□ -0.82
CLIP1-209ENST00000537178 SCGB1D1O95968 90 aa9.93□□□□□ -0.82
CLIP1-209ENST00000537178 PRSS56P0CW18 603 aa9.93□□□□□ -0.82
CLIP1-209ENST00000537178 CT45A6P0DMU7 189 aa9.93□□□□□ -0.82
CLIP1-209ENST00000537178 CT45A5P0DMU8 189 aa9.93□□□□□ -0.82
CLIP1-209ENST00000537178 CT45A7P0DMV0 189 aa9.93□□□□□ -0.82
CLIP1-209ENST00000537178 CT45A8P0DMV1 189 aa9.93□□□□□ -0.82
CLIP1-209ENST00000537178 CT45A9P0DMV2 189 aa9.93□□□□□ -0.82
CLIP1-209ENST00000537178 GPX3P22352 226 aa9.93□□□□□ -0.82
CLIP1-209ENST00000537178 IL32P24001 234 aa9.93□□□□□ -0.82
CLIP1-209ENST00000537178 DPP4P27487 766 aa9.93□□□□□ -0.82
CLIP1-209ENST00000537178 GJA5P36382 358 aa9.93□□□□□ -0.82
CLIP1-209ENST00000537178 GMPRP36959 345 aa9.93□□□□□ -0.82
CLIP1-209ENST00000537178 P2RY2P41231 377 aa9.93□□□□□ -0.82
CLIP1-209ENST00000537178 GIPRP48546 466 aa9.93□□□□□ -0.82
CLIP1-209ENST00000537178 P2RX1P51575 399 aa9.93□□□□□ -0.82
CLIP1-209ENST00000537178 POU3F1Q03052 451 aaPredicted RBP9.93□□□□□ -0.82
CLIP1-209ENST00000537178 CT45A2Q5DJT8 189 aa9.93□□□□□ -0.82
CLIP1-209ENST00000537178 CT45A1Q5HYN5 189 aa9.93□□□□□ -0.82
CLIP1-209ENST00000537178 C3orf38Q5JPI3 329 aa9.93□□□□□ -0.82
CLIP1-209ENST00000537178 PIP5KL1Q5T9C9 394 aa9.93□□□□□ -0.82
CLIP1-209ENST00000537178 LPCAT3Q6P1A2 487 aa9.93□□□□□ -0.82
CLIP1-209ENST00000537178 PODNL1Q6PEZ8 512 aa9.93□□□□□ -0.82
CLIP1-209ENST00000537178 APOOLQ6UXV4 268 aa9.93□□□□□ -0.82
CLIP1-209ENST00000537178 IDO2Q6ZQW0 420 aa9.93□□□□□ -0.82
CLIP1-209ENST00000537178 CBLL1Q75N03 491 aa9.93□□□□□ -0.82
CLIP1-209ENST00000537178 CCDC71Q8IV32 467 aaPredicted RBP9.93□□□□□ -0.82
CLIP1-209ENST00000537178 CNEP1R1Q8N9A8 125 aa9.93□□□□□ -0.82
CLIP1-209ENST00000537178 OR52R1Q8NGF1 315 aa9.93□□□□□ -0.82
CLIP1-209ENST00000537178 CT45A3Q8NHU0 189 aa9.93□□□□□ -0.82
CLIP1-209ENST00000537178 MUL1Q969V5 352 aa9.93□□□□□ -0.82
CLIP1-209ENST00000537178 FCRL1Q96LA6 429 aa9.93□□□□□ -0.82
CLIP1-209ENST00000537178 VN1R3Q9BXE9 311 aa9.93□□□□□ -0.82
CLIP1-209ENST00000537178 OLAHQ9NV23 265 aa9.93□□□□□ -0.82
CLIP1-209ENST00000537178 CXXC1Q9P0U4 656 aaPredicted RBP9.93□□□□□ -0.82
CLIP1-209ENST00000537178 CBLCQ9ULV8 474 aa9.93□□□□□ -0.82
CLIP1-209ENST00000537178 NPIPB15A6NHN6 443 aaPredicted RBP9.93□□□□□ -0.82
CLIP1-209ENST00000537178 OR52A4PA6NMU1 304 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms