RNA–Protein interactions for RNA: ENST00000536871.6

SMG6-203, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 2 BASIC

Gene SMG6, Length 1,865 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-203ENST00000536871 SLC25A1P53007 311 aa12.41□□□□□ -0.42
SMG6-203ENST00000536871 EFR3AQ14156 821 aa12.41□□□□□ -0.42
SMG6-203ENST00000536871 CCDC58Q4VC31 144 aa12.41□□□□□ -0.42
SMG6-203ENST00000536871 GPR139Q6DWJ6 353 aa12.41□□□□□ -0.42
SMG6-203ENST00000536871 VASH1Q7L8A9 365 aaPredicted RBP12.41□□□□□ -0.42
SMG6-203ENST00000536871 KANSL1Q7Z3B3 1105 aa12.41□□□□□ -0.42
SMG6-203ENST00000536871 TEX19Q8NA77 164 aa12.41□□□□□ -0.42
SMG6-203ENST00000536871 PHYHIPQ92561 330 aa12.41□□□□□ -0.42
SMG6-203ENST00000536871 CLIP3Q96DZ5 547 aa12.41□□□□□ -0.42
SMG6-203ENST00000536871 GAL3ST4Q96RP7 486 aa12.41□□□□□ -0.42
SMG6-203ENST00000536871 ADOQ96SZ5 270 aa12.41□□□□□ -0.42
SMG6-203ENST00000536871 MNTQ99583 582 aa12.41□□□□□ -0.42
SMG6-203ENST00000536871 TMED9Q9BVK6 235 aa12.41□□□□□ -0.42
SMG6-203ENST00000536871 TBL1XR1Q9BZK7 514 aa12.41□□□□□ -0.42
SMG6-203ENST00000536871 MED20Q9H944 212 aa12.41□□□□□ -0.42
SMG6-203ENST00000536871 FKRPQ9H9S5 495 aa12.41□□□□□ -0.42
SMG6-203ENST00000536871 PLEKHB1Q9UF11 243 aaPredicted RBP12.41□□□□□ -0.42
SMG6-203ENST00000536871 A8MUA0 341 aa12.4□□□□□ -0.42
SMG6-203ENST00000536871 NDUFB5O43674 189 aa12.4□□□□□ -0.42
SMG6-203ENST00000536871 SLC19A2O60779 497 aa12.4□□□□□ -0.42
SMG6-203ENST00000536871 TMEM127O75204 238 aa12.4□□□□□ -0.42
SMG6-203ENST00000536871 TXNDC12O95881 172 aa12.4□□□□□ -0.42
SMG6-203ENST00000536871 LALBAP00709 142 aa12.4□□□□□ -0.42
SMG6-203ENST00000536871 MT-ATP6P00846 226 aa12.4□□□□□ -0.42
SMG6-203ENST00000536871 HIST1H2ABP04908 130 aa12.4□□□□□ -0.42
SMG6-203ENST00000536871 HIST1H1CP16403 213 aaKnown RBP12.4□□□□□ -0.42
SMG6-203ENST00000536871 PTNP21246 168 aa12.4□□□□□ -0.42
SMG6-203ENST00000536871 CCR4P51679 360 aa12.4□□□□□ -0.42
SMG6-203ENST00000536871 MXD1Q05195 221 aa12.4□□□□□ -0.42
SMG6-203ENST00000536871 CD226Q15762 336 aa12.4□□□□□ -0.42
SMG6-203ENST00000536871 HIST3H2AQ7L7L0 130 aa12.4□□□□□ -0.42
SMG6-203ENST00000536871 C9orf40Q8IXQ3 194 aa12.4□□□□□ -0.42
SMG6-203ENST00000536871 CADM3Q8N126 398 aa12.4□□□□□ -0.42
SMG6-203ENST00000536871 TMEM99Q8N816 258 aa12.4□□□□□ -0.42
SMG6-203ENST00000536871 ZNF441Q8N8Z8 693 aa12.4□□□□□ -0.42
SMG6-203ENST00000536871 LILRB4Q8NHJ6 448 aa12.4□□□□□ -0.42
SMG6-203ENST00000536871 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.4□□□□□ -0.42
SMG6-203ENST00000536871 ASB15Q8WXK1 588 aa12.4□□□□□ -0.42
SMG6-203ENST00000536871 HIST1H2ACQ93077 130 aa12.4□□□□□ -0.42
SMG6-203ENST00000536871 TXNDC15Q96J42 360 aa12.4□□□□□ -0.42
SMG6-203ENST00000536871 HCAR1Q9BXC0 346 aa12.4□□□□□ -0.42
SMG6-203ENST00000536871 MMP25Q9NPA2 562 aa12.4□□□□□ -0.42
SMG6-203ENST00000536871 COLQQ9Y215 455 aaPredicted RBP12.4□□□□□ -0.42
SMG6-203ENST00000536871 THADAQ6YHU6 1953 aa12.4□□□□□ -0.42
SMG6-203ENST00000536871 IGKV1D-42A0A075B6H8 117 aa12.4□□□□□ -0.42
SMG6-203ENST00000536871 A0A1W2PQL4 384 aaPredicted RBP12.4□□□□□ -0.42
SMG6-203ENST00000536871 ANKRD34BA5PLL1 514 aa12.4□□□□□ -0.42
SMG6-203ENST00000536871 OR6C70A6NIJ9 312 aa12.4□□□□□ -0.42
SMG6-203ENST00000536871 A8MU76 341 aa12.4□□□□□ -0.42
SMG6-203ENST00000536871 MCIDASD6RGH6 385 aa12.4□□□□□ -0.42
SMG6-203ENST00000536871 HTR3AP46098 478 aa12.4□□□□□ -0.42
SMG6-203ENST00000536871 CENPAP49450 140 aa12.4□□□□□ -0.42
SMG6-203ENST00000536871 NR0B1P51843 470 aaKnown RBP12.4□□□□□ -0.42
SMG6-203ENST00000536871 GBX2P52951 348 aaPredicted RBP12.4□□□□□ -0.42
SMG6-203ENST00000536871 CBFBQ13951 182 aa12.4□□□□□ -0.42
SMG6-203ENST00000536871 VWA2Q5GFL6 755 aa12.4□□□□□ -0.42
SMG6-203ENST00000536871 KCTD20Q7Z5Y7 419 aa12.4□□□□□ -0.42
SMG6-203ENST00000536871 JAZF1Q86VZ6 243 aa12.4□□□□□ -0.42
SMG6-203ENST00000536871 OR4K13Q8NH42 304 aa12.4□□□□□ -0.42
SMG6-203ENST00000536871 SAP25Q8TEE9 199 aa12.4□□□□□ -0.42
SMG6-203ENST00000536871 NUDT22Q9BRQ3 303 aa12.4□□□□□ -0.42
SMG6-203ENST00000536871 NMNAT2Q9BZQ4 307 aa12.4□□□□□ -0.42
SMG6-203ENST00000536871 PILRBQ9UKJ0 227 aa12.4□□□□□ -0.42
SMG6-203ENST00000536871 RARRES3Q9UL19 164 aa12.4□□□□□ -0.42
SMG6-203ENST00000536871 PCDHGB2Q9Y5G2 931 aa12.4□□□□□ -0.42
SMG6-203ENST00000536871 V9GYH0 126 aa12.4□□□□□ -0.42
SMG6-203ENST00000536871 ARPC4-TTLL3A0A0A6YYG9 625 aa12.39□□□□□ -0.43
SMG6-203ENST00000536871 FABP12A6NFH5 140 aa12.39□□□□□ -0.43
SMG6-203ENST00000536871 SOX1O00570 391 aaPredicted RBP12.39□□□□□ -0.43
SMG6-203ENST00000536871 ICOSLGO75144 302 aa12.39□□□□□ -0.43
SMG6-203ENST00000536871 ASAH2BP0C7U1 165 aa12.39□□□□□ -0.43
SMG6-203ENST00000536871 GP1BBP13224 206 aa12.39□□□□□ -0.43
SMG6-203ENST00000536871 NAGAP17050 411 aa12.39□□□□□ -0.43
SMG6-203ENST00000536871 MYL9P24844 172 aa12.39□□□□□ -0.43
SMG6-203ENST00000536871 CXCR1P25024 350 aa12.39□□□□□ -0.43
SMG6-203ENST00000536871 SDHAP31040 664 aa12.39□□□□□ -0.43
SMG6-203ENST00000536871 CD79BP40259 229 aa12.39□□□□□ -0.43
SMG6-203ENST00000536871 SLC26A5P58743 744 aa12.39□□□□□ -0.43
SMG6-203ENST00000536871 SCN1BQ07699 218 aa12.39□□□□□ -0.43
SMG6-203ENST00000536871 NDUFAF6Q330K2 333 aa12.39□□□□□ -0.43
SMG6-203ENST00000536871 ALG10Q5BKT4 473 aa12.39□□□□□ -0.43
SMG6-203ENST00000536871 C10orf53Q8N6V4 93 aa12.39□□□□□ -0.43
SMG6-203ENST00000536871 ZNF321PQ8N8H1 164 aa12.39□□□□□ -0.43
SMG6-203ENST00000536871 NUBPLQ8TB37 319 aa12.39□□□□□ -0.43
SMG6-203ENST00000536871 METTL21AQ8WXB1 218 aa12.39□□□□□ -0.43
SMG6-203ENST00000536871 OMA1Q96E52 524 aa12.39□□□□□ -0.43
SMG6-203ENST00000536871 DIRAS2Q96HU8 199 aa12.39□□□□□ -0.43
SMG6-203ENST00000536871 HDHD5Q9BXW7 423 aa12.39□□□□□ -0.43
SMG6-203ENST00000536871 MFRPQ9BY79 579 aa12.39□□□□□ -0.43
SMG6-203ENST00000536871 SEMA4CQ9C0C4 833 aa12.39□□□□□ -0.43
SMG6-203ENST00000536871 PRMT8Q9NR22 394 aaPredicted RBP12.39□□□□□ -0.43
SMG6-203ENST00000536871 PPIEQ9UNP9 301 aaKnown RBP12.39□□□□□ -0.43
SMG6-203ENST00000536871 HCRTR2O43614 444 aa12.38□□□□□ -0.43
SMG6-203ENST00000536871 GPRIN2O60269 458 aa12.38□□□□□ -0.43
SMG6-203ENST00000536871 GATBO75879 557 aaKnown RBP12.38□□□□□ -0.43
SMG6-203ENST00000536871 GLCEO94923 617 aa12.38□□□□□ -0.43
SMG6-203ENST00000536871 TACR3P29371 465 aa12.38□□□□□ -0.43
SMG6-203ENST00000536871 P2RX1P51575 399 aa12.38□□□□□ -0.43
SMG6-203ENST00000536871 SUMO3P55854 103 aaPredicted RBP12.38□□□□□ -0.43
SMG6-203ENST00000536871 DCDP81605 110 aaKnown RBP12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms